Sander lucioperca (pikeperch): 116061369
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Entry
116061369 CDS
T07345
Name
(RefSeq) integrin beta-3
KO
K06493
integrin beta 3
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03266
Virion - Herpesvirus
sluc04081
Hormone signaling
sluc04145
Phagosome
sluc04148
Efferocytosis
sluc04510
Focal adhesion
sluc04512
ECM-receptor interaction
sluc04810
Regulation of actin cytoskeleton
sluc04820
Cytoskeleton in muscle cells
sluc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
116061369
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
116061369
04512 ECM-receptor interaction
116061369
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116061369
04148 Efferocytosis
116061369
09144 Cellular community - eukaryotes
04510 Focal adhesion
116061369
09142 Cell motility
04820 Cytoskeleton in muscle cells
116061369
04810 Regulation of actin cytoskeleton
116061369
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116061369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116061369
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sluc04147
]
116061369
04515 Cell adhesion molecules [BR:
sluc04515
]
116061369
04090 CD molecules [BR:
sluc04090
]
116061369
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
116061369
Exosome [BR:
sluc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116061369
Cell adhesion molecules [BR:
sluc04515
]
Integrins
Integrin beta subunits
116061369
CD molecules [BR:
sluc04090
]
Proteins
116061369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_integrin
EGF_2
EGF_TEN
EGF_Teneurin
BNR_6
Motif
Other DBs
NCBI-GeneID:
116061369
NCBI-ProteinID:
XP_031171391
Ensembl:
ENSSLUG00000000540
LinkDB
All DBs
Position
22:15844567..15863216
Genome browser
AA seq
794 aa
AA seq
DB search
MGAFPAQRILWTCLILTGITAVYGSNVCTSRGASTCKQCLAVHPSCAWCFQEDFGQGVAS
SSRCDLKSNLVAAGCALSALESPTSKLQVIEDRPLSNKAAGATQDVTQINPQKLHITLRP
DDAKRFTVKVRQVEDYPVDLYYLMDLSYSMNDDLFRLRTLGKGLAEAMNRTTSNLRMGFG
AFVDKPLSPYMYISPKEAVKNPCYSINTTCLPQFGYKHVLSLTEEVGRFTEEVKKQMVSR
NRDAPEGGFDAIIQAAVCKEQIGWRPGASHLLIFTSDAKTHVALDGRLAGIVQPNDGQCH
LNSDKMYSMSTTMDYPSLALITEKMSENNINLIFAVTNPVVPLYQNYSELIPGTTVGTLS
NDSGNVIQLILKAYAKIRSKVELELQGVPEELSLSFNATCLNGELIPGLKSCSGLKIGDT
VSFSVEARARGCPKQKKKTFIIKPVGFKDSLSITVNFECDCKCQTKAQPNSPKCNQGNGT
YECGICLCHPGRLGPHCECAEGDYNPTEQDRCSGPAGSGGPQSAICSGRGDCVCGQCVCH
SSDFGKVWGKLCECDDFNCLRYKGELCSGHGVCNCGFCQCAPDWQGENCNCSRRTDTCMS
NLGLLCSGRGQCVCGACECTQPGAYGATCDKCPTCPDACTMKKECVECKHFKRGKLFEDN
TCSRICKDEIMLVDEIVLHDTNAVNCTYKDEDDCVERFQYYEDASGKSILFVVKEPDCPK
GPDILVVLLSVAGAILFLGLAALLIWKLLVTIHDRREFAKFEEERAHAKWDTGHNPLYKG
ATSTFTNITYRGKD
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctttcccggcacaaaggatattatggacgtgtttgatccttactggaataaca
gcagtttacggttcaaatgtctgcacctccagaggggccagcacatgcaagcaatgtctg
gctgtgcaccccagctgtgcatggtgcttccaggaggactttggccagggggttgccagt
tcttctcgctgtgatttgaagagtaacctggtggcagcaggctgtgctctatcagctctg
gagtctccaaccagcaaactgcaggtgatcgaggaccggcccctcagcaacaaggccgcg
ggggccacacaagacgtcacccagataaatccccagaaactacacatcaccctcaggcca
gatgatgctaagcgtttcacagtgaaagtgcgtcaggtagaggactaccctgtggatctc
tactacctcatggatctctcctactccatgaacgatgacctcttccgcctgaggacactg
ggcaaaggcctggccgaggccatgaaccgcaccacaagcaacctccgcatgggctttggg
gcttttgtggacaagccactctcgccctacatgtacatctcccccaaagaagctgttaag
aacccctgctacagcattaacaccacctgtctgccccagtttggctacaaacacgttctg
tccctgacggaggaggtgggccgcttcacagaggaagtgaagaagcagatggtgtccagg
aaccgcgatgccccggagggaggcttcgatgccatcatccaggctgctgtgtgcaaggag
cagatcggttggcgccctggtgcatcccatctgctgatcttcacctcggacgctaagact
cacgtggctctggatggtcgtctggctggaatcgtgcagcccaacgatgggcagtgccac
ctcaactctgacaaaatgtacagcatgtctaccaccatggattacccatctctagctctg
atcacagagaagatgtcggagaacaacattaatctcatttttgctgtcaccaatcctgtg
gttcctctgtaccagaactacagtgagctgattcctggcaccacagtaggaacactgtca
aacgactcgggcaatgttattcagctcatactgaaggcctacgctaaaatccgttccaag
gtggagctggagcttcaaggcgtcccagaggagctgtctctgtccttcaacgctacttgt
ctgaatggagagcttatccctggcctcaaatcctgctctggactcaagataggagacacg
gtctctttcagcgtggaggccagagctcgaggttgccccaaacagaagaagaaaaccttc
atcattaagcctgtgggcttcaaggactccctctccatcactgtcaacttcgagtgtgac
tgcaagtgccagaccaaggcccagcccaatagccccaaatgtaaccaaggcaacggcaca
tatgagtgtggcatttgcctgtgtcacccaggtcgcttagggccgcactgcgagtgtgca
gagggtgactataaccccacagagcaggaccgctgcagcggacctgcaggctctggagga
cctcagtctgccatctgcagcggccgtggagactgtgtgtgtggccagtgtgtgtgccac
agcagtgacttcggaaaagtctggggaaagctgtgtgaatgtgatgacttcaattgcctg
cgctacaaaggggaactctgctcaggtcatggcgtctgtaactgtggtttctgccagtgc
gcaccagactggcagggtgagaactgtaactgctccagacgtactgacacctgcatgtcc
aacctgggcttgttgtgcagcgggaggggccaatgtgtgtgtggggcctgtgagtgcacc
cagcctggggcctacggagccacatgtgacaagtgccccacctgccctgatgcctgcact
atgaagaaggagtgtgtggagtgtaagcacttcaagaggggaaagctgtttgaggacaac
acctgctctcgaatctgcaaggatgagattatgcttgtggatgaaatagtgctccatgat
acaaatgctgtgaactgcacttacaaagatgaagatgattgtgtggagcgtttccagtac
tatgaggacgccagtggaaagtccatcttgtttgttgtcaaagagccagactgtcccaag
ggtccagacattttggtggtgcttctgtcagtggcaggagccatcttgttcctcggcttg
gcggctctgcttatctggaaacttctggtcactattcacgacagacgggagttcgccaaa
tttgaggaagaacgcgctcatgccaagtgggacacgggacacaatcctctctacaaagga
gccacatctaccttcacaaacatcacatacagaggaaaagactga
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