Sander lucioperca (pikeperch): 116061409
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Entry
116061409 CDS
T07345
Symbol
tdrd1
Name
(RefSeq) tudor domain-containing protein 1 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116061409 (tdrd1)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116061409 (tdrd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
zf-MYND
MYND_ZMYND11_ZMYD8
zf-HIT
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
116061409
NCBI-ProteinID:
XP_031171448
Ensembl:
ENSSLUG00000001307
LinkDB
All DBs
Position
22:complement(15616682..15630417)
Genome browser
AA seq
1202 aa
AA seq
DB search
MCNTLYLYHQHVHTAATMYRSFSPNLVRPNQPLRKPSSTPVALITALPSPRHPTMPNATP
VRPASGAIGDGISRDQSAVLGSIPPALTVYFCNFCGQQGNFRCKRCKKTPYCSVVCQTED
WKAHRHMCKSIDLEPEKETTKETTALLVTGDGAGPVESKHGDASSLQRVYFKDLHITKII
KGTDIQASVVEFYSPGRFFLVAQSPELLEALQYISTELQKTNSCPSMRTYVPHVGEVCAV
QFSCDLNWYRGLVQTLAADQKTANILYIDFGNEEDVPVDRIKPLAANIQPFCPCAMECHI
AGVVPVTGNWSGECRISVKQLLAGKIVTVRLVESLENGRIHAVDILLSMGKKLSTFLLEH
GYAAEETVNETPTQQKINAMVSASLDNFRRLSDGKDDNTWAQPPEPLTLAVGDSFSVVVT
HLQSPNEIIVQKVENAGVIQELQLKLREHCCQAPAPHNFRPAPSTVCCAQFSEDKQWYRA
KILAYSSEERVCVGYLDFGNSEEVDLGYLQPISTSLLALPMQAMACGLAGVQPVGESWSE
DCLLALQRRVSNRILRLEIQGAHEGKALVAMIDEASDPQANVAELLISAGFAAPAPPPVP
TSSDQQADETATVPAEPHGVPAPACEPLVWSCSELPCDGQTVALLASVLENPQEFYCRIN
NPTDHQRLIELGAELKQHCAAEASPFVPKVGEPCCAMFPGDKEWYRAMVNELSEDVSVNF
VDYGYSMKVEKDHIRSITPRLLNLPFQAIRCWLTGVEPLGSEWSSEALLWFQSLVDGKQL
SARVLCATEQGYGVELESKGQNVAAALISAQLAKVPGAVPKETHATTGSEHKHQENIQEN
ENSQMHVQASDQTGISSKKMPTEGHSAVPSEAPSFPVDWKTVELPLNDTFQPCIAAVTSP
SLFYLLVPSQVDQQKLQEVMMELVAYCSNIRACLSSTVLSRPVPGAACCAQFSADNNWYR
AVVLEVGDNEMSVIYADYGNSEKVPFSRILPITKHLLQLPFQITRCTLTGKEHFPTELPE
EVLQMFQSQLLNGVLATVQSFNGSVNVLSLTLPTERGGGHLTTMILDALQDQANSNPCSS
TTQNADQTDSTTVVHDCPPQPMVIPETQKGLKHTTATTGLTIPEREPQTPQQKKNTSAVS
VNEDPVQEIIAQMEPPCKIDTKTNDPQASSCCCLNLTTKIDHLEQLVQLQLSLIKQFVGQ
TK
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaacacactttacctctaccatcaacacgtgcacacagctgccaccatgtaccgc
tcattttctccaaacctggttcgacctaaccagcccttgaggaaaccatcatcgaccccc
gtggctcttattaccgcattgccttctccaagacatccaaccatgcccaatgcaacacct
gtgcgccccgcctcaggcgccattggagacggaatcagcagggatcaatctgcagtgtta
ggatccataccaccagcgctgactgtatacttctgcaacttctgtggtcagcaaggaaat
tttcggtgcaagcgctgcaagaagactccttactgctctgtggtgtgtcagacagaagac
tggaaggcacacagacacatgtgcaagtccattgatctagaacctgaaaaagagacaact
aaggaaacaacagctttgctggtgacaggagacggagccggcccggttgagtctaagcac
ggtgatgcatccagcctccagagggtctatttcaaggacttgcatataactaaaatcatt
aagggaacagacatccaggcatctgttgtagagttctacagccctggcaggttttttctc
gttgcccaaagtcctgagctgctggaagctctgcagtacatcagcacagagcttcagaaa
actaacagctgcccatcaatgaggacatatgtaccacatgttggtgaggtttgcgcggtt
cagttctcctgtgatctgaactggtaccgaggcctggtccagactttagctgctgaccag
aagacggctaatatcctttacattgactttggcaatgaagaggatgtacctgtggatagg
atcaagcccctggctgctaatatccagccattttgtccatgcgcaatggagtgccatatc
gctggggtggtcccagtgactggcaactggtcaggcgagtgccgtatatcagtgaaacag
ctgttggccggcaagattgtgactgttagactggtggaatcactagaaaatggccgcatc
catgctgtggatatcctgctttccatgggaaagaagttgagcactttcctccttgagcac
ggttatgcagcagaagaaacagtcaacgaaacaccaactcagcaaaaaataaatgccatg
gtaagtgcatccttggataacttcaggcgtctctccgatgggaaggatgacaacacctgg
gctcagccaccagagccactgacactggcagtaggtgactccttctctgttgtggttact
catcttcagtcacccaatgaaattatcgtacagaaggtggagaacgctggagtgattcag
gagttgcagctgaagctgagggaacactgctgccaggccccagccccccacaacttcagg
ccagcccccagcacagtttgctgtgcccagttctcagaggacaagcagtggtacagggct
aaaattctggcttattcatcagaggaacgcgtctgtgtcggctaccttgattttggcaac
tctgaggaggtggatttaggctacctgcagcctatcagcacttcactactggccctgccc
atgcaggctatggcttgtggtcttgcaggggtgcagcctgttggggagagctggtcagag
gactgcctgctggccctgcagcgaagggtatcgaaccgaatactgcgccttgagatccag
ggagcacatgagggcaaggctttggtggccatgattgacgaggccagtgatcctcaggcc
aatgtagccgagctgttgatctctgctggtttcgctgcacctgctcctcctcctgttccc
accagcagtgaccagcaggctgacgagacagcaactgttcctgcggaaccacatggtgta
ccggccccagcctgtgagcctctggtgtggtcttgtagtgagcttccatgtgacggccag
acagtggcactgctggccagtgttttggagaaccctcaagagttttactgccggatcaac
aatcccacagaccatcagcggctgatagagctcggggctgagttgaaacagcattgtgcg
gcagaggcctcaccttttgtgcccaaagtgggggagccctgttgtgccatgtttccaggt
gataaagagtggtatcgggctatggtaaacgagctgtctgaagacgtgtctgtaaacttc
gtggactatggttatagcatgaaagtggaaaaggaccacattcgatccattacaccccga
ctcctgaatctacccttccaggcaattcgctgctggctcacaggtgtggagcccctggga
tcagagtggagcagtgaagccctgctgtggttccagagtctggtggatggcaagcagctc
tctgcacgtgtcctttgtgccactgaacaaggctatggtgtggagctagagagcaaaggg
cagaatgtggcagctgccctcatttctgcgcaactagccaaagttcctggagcggttccc
aaagagacacatgcaaccacaggctctgaacacaaacaccaagagaacatacaggaaaat
gaaaacagccaaatgcatgtgcaagcctccgaccagacaggaatcagttccaaaaagatg
ccaacagagggtcattctgcagtgccatcagaagccccatcttttccagtggactggaag
acagtggagctgcctctcaacgacacctttcagccttgcattgcagctgtcacgagtcct
tccctcttctacctgctcgttcctagccaggtggaccagcagaagcttcaggaggtgatg
atggagctggttgcctattgcagcaacattcgtgcttgtttatcctccactgtcctgagc
agaccagttcctggggctgcctgctgtgcccagttctctgctgacaataactggtaccgt
gcagtggtcctggaggtcggtgacaatgagatgagtgtcatctatgcagattacgggaac
agtgagaaggtgccattctcccgtatcttgcccatcaccaagcacctgctgcagctcccc
tttcagatcactcgctgcaccctcactggtaaggaacacttccctacagagttgccagag
gaagtgctgcagatgtttcaaagccagctgttgaatggtgtcctcgccactgtccagtcc
ttcaatggctctgttaacgtgctctcactcactctgcccactgagaggggcggggggcac
ctcaccaccatgatcttggatgcgctacaggaccaggccaatagtaatccttgctcatcc
accacccagaatgctgaccaaactgacagcaccacagttgtacatgactgccccccccaa
cccatggtcatacctgaaacccaaaaggggctgaaacatacaactgctaccaccggccta
accatcccagagcgggaaccccagactccccagcagaagaaaaacacctctgctgtgtca
gtcaatgaagatcccgttcaggagataattgcgcaaatggaacctccatgcaaaattgat
accaaaactaacgatcctcaggcctctagctgctgctgtctgaacctgacaactaagatt
gaccacctggaacagttggtgcagctgcagctttctctcatcaagcagtttgtgggacag
acaaaataa
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integrated database retrieval system
