KEGG T07345: 116061706

Sander lucioperca (pikeperch): 116061706

Entry

116061706         CDS       T07345

Symbol

cdc5l

Name

(RefSeq) cell division cycle 5-like protein

K12860

pre-mRNA-splicing factor CDC5/CEF1

Organism

sluc Sander lucioperca (pikeperch)

Pathway

sluc03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:sluc00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116061706 (cdc5l)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sluc03041]
    116061706 (cdc5l)
   03400 DNA repair and recombination proteins [BR:sluc03400]
    116061706 (cdc5l)
Spliceosome [BR:sluc03041]
Complex B
  Other components
   Prp19 complex
    116061706 (cdc5l)
Complex C
   Prp19-CDC5 complex
    116061706 (cdc5l)
DNA repair and recombination proteins [BR:sluc03400]
Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    116061706 (cdc5l)

SSDB

Motif

Pfam:

Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

15:30670981..30683093

AA seq 812 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEYLLDKAAQRDNEEEVGDDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIDVQKKRKKKRGVDYNAEIPFEKKPASGFYDTSMEQYNPLEPNFK
RLRQQHLDGELRNEQEERDRKKDKQKIKKKKESDLPSAILQTSGVAEFTKKRSKLVLPTP
QISDAELEEVVKLGVASEVARQAAEESESGSSASSALLSEYSVTNAMSTGLRTPRTPAAQ
DRILQEAQNLMALTNIDTPLKGGLNTPLHESDFSGVTPQRQQIQTPNTVLTTPFRTPGQG
QEQDGMTPQAVGALTPRGAVTPGLTPLRTPLRDKLNINSEEQLADPAYSKHLQRESLQQL
KQGLMSLPVPKNDFEIVLPENAEMELEETEAESGFIEDSAEVEARKQAIRDAEREKELKL
RHTAVQRNLPRPTEVNESVLRPTSMEPLLDFQLAEELIKQEMITMLHYDCLHHPSANAAS
QLQRGKTRGPTSTSNNASHITYLESHSYKPISTEEMEQAKAALAAEMEVVKAGMGHGDLS
MEAYSQVWEECYGQVLYLPAQNRYTRANLASKKDRIESLEKKLEVNRGHMTAEARRAAKL
EKKLKILLGGFQSRALGLLKQHNELWEQVEQSATELQTFNQLKKQEDTAIPRRKEALRED
VERQMERERELQQRYGELLMEREALLNSAQKY

NT seq 2439 nt +upstreamnt +downstreamnt
atgccgcgaattatgattaaaggaggcgtctggcgcaacacggaggatgagatcctcaag
gcagcggtgatgaaatatgggaagaaccagtggtctcgtattgcctccctgctgcaccgc
aagtctgccaaacagtgtaaagcccgatggtacgagtggttggaccccagcatcaagaaa
acagaatggtccagagaagaggaggagaagttgctccatttggccaagctgatgcccact
cagtggaggaccattgctcctatcataggacgcactgctgcccagtgcctggaacactat
gaatacctgctagacaaggcagcacaaagagacaacgaggaagaagtgggagacgacccc
aggaagttaaaaccaggagagatcgaccctaatcctgaaactaaacctgccagacccgac
cctgtggacatggacgaagatgagctggagatgctgtcagaggccagggctcgactggcc
aatacccagggcaagaaagccaagaggaaggccagagagaaacagctggaggaagccagg
cggttggctgctctgcagaagcgcagagagctcagggcggcaggaatcgatgttcagaag
aagaggaagaagaagagaggagtagactacaacgctgaaatcccatttgaaaagaaaccg
gcatcgggtttctatgacaccagcatggagcagtacaaccctctggagcccaacttcaaa
cgactccgacaacagcacttggacggagaactacgcaatgagcaagaggagagggacaga
aagaaagataaacagaagatcaagaagaagaaagagagtgatctcccatctgccatcctg
cagaccagcggagtggctgagttcaccaagaaacgctccaaactggttttacctacacca
cagatcagtgatgctgagctggaggaagtcgtcaaattgggtgtcgccagtgaggtcgcc
cgtcaagctgccgaggagagcgaaagcgggagctcggcctcctctgccctcctgtcagag
tacagcgtcaccaacgccatgtccacggggcttcgtaccccacgcacccctgctgcccag
gacaggatactgcaggaagcccagaacctgatggctctgaccaacattgacacccctcta
aagggaggcctcaacactccgctgcacgagagcgacttcagtggcgtgacgcctcagcga
cagcagatacaaacacccaacacagttctcactacaccattcagaactccaggacagggt
caggagcaggacggcatgacccctcaagctgtaggagcgctgaccccgcgcggtgcagtg
accccaggtttgacccctctgcgcactccgctgagagacaaactgaacattaatagtgag
gagcaactggctgaccccgcatactctaaacacctgcaaagggaaagcctgcagcagctg
aagcagggcctgatgtcacttcctgttcccaagaacgactttgagattgttcttccggaa
aacgcagagatggaactcgaagaaacggaggcagagtcgggatttatagaggactctgca
gaagtagaggcacgcaagcaggctatacgggatgcagaaagagagaaggagctgaagctg
cgacacactgctgttcagaggaatctccccagacccactgaggtaaacgaatccgtcctc
cgtcccacctccatggagcctctcttggacttccagctggccgaggagctgatcaaacag
gaaatgattaccatgctgcattacgactgcctgcaccacccgtcagccaacgcagccagt
caactgcagcgcggcaaaaccagaggccccacctctacatctaacaacgcttcgcatata
acatacctggaatcacattcctacaagccaatcagcacggaggagatggagcaggcaaag
gcagcactggcagcagaaatggaggtggtgaaggcgggaatgggccacggggatctcagc
atggaggcctacagccaggtgtgggaggaatgctacggacaggtgttatatctacccgct
cagaacaggtacaccagagccaacctggcatcaaagaaagaccgtatcgagagcctggag
aaaaaactagaggtgaaccgtggccacatgaccgcagaggcccggagagcagctaagctg
gagaagaaactcaaaatcctgctgggaggctttcagtccagagccctggggctcctgaag
cagcacaatgaactctgggaacaggtggagcagtcagccacagagctccagaccttcaat
cagctgaagaaacaagaggatactgccattcccaggagaaaagaggccctgcgggaggac
gtggagaggcagatggagagagaacgagaacttcagcagagatatggggagctgctgatg
gagagggaggcactgctcaacagtgctcagaaatactga

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