Sander lucioperca (pikeperch): 116061712
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Entry
116061712 CDS
T07345
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sluc03037
]
116061712
Cilium and associated proteins [BR:
sluc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116061712
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
HOOK
KASH_CCD
DUF4472
Rod_CreS
APG6_N
Rab11-FIP3
PRR11_2nd
Motif
Other DBs
NCBI-GeneID:
116061712
NCBI-ProteinID:
XP_031171883
Ensembl:
ENSSLUG00000011599
LinkDB
All DBs
Position
15:26722254..26792507
Genome browser
AA seq
2053 aa
AA seq
DB search
MESEVFTPLLEQFMLTPLVCWVKTVGQATLVDGTQLSEYIELVDGIYLNEIMLEINPKAT
VQRTNKKVNNDATLRIQNLSILIRQIKAYYQETLQQLVMMPLPNVLVLGRNPLSEQGLEE
MKKLLLLLLGCAVQCEKKEEYIECIQTLDFDTKAAIASHIQEVTHNQENVVDMQWLESGE
MPPEDLDSLSRNLAFHLKRLVDERDTQLETIVELTQERDCVQLSPLAPCPTQSPGDSPSI
RRTESRQHLSVELADAKAKIRRLRQELEEKSEQLMDTRQELENMEVELKRLQQESYQLLS
DARSARAYRDELDALREKAIRVDKLESELSRYKERLHDIEFYKARVEELKEDNQVLLETK
SMLEEQLDASRTRSDKLHLLEKESLQLKSKLHDLEMERDMDRKRMEELLEENLVLEMAQK
QSMDESLHLGWELEQLSKTPDLTEAPQKSLGEEVNELTSSRLLKLEKDNQTLLKTVEELR
GAASQDTVTKLAKVSQENQRLNQKLEQLGSELTADRESLLSAESLSTDLMKEKALLEKTL
ETLRENSERQLKGLEQENKHLSQTVSSLRQRCQVGAEARVKDVEKENRVLHESICETTAK
LNKMEFERKQLRKELEVVKEKGERAEELEIQIQKLERDNDSLQKKVASLGITCEKVSSLE
KENTELEAEGRRLKKKLDTLKNMAFQLEALEKENSQLEQENLELRRSAESLRSAGAKAAQ
LEAENRELESERSQMKRSLELLKASSKKTERLEVSYQGLDTENQRLQKALENSSKKIQHL
EAELQEVETENQTLQRNLEELKISSKRLEQLEQENKTLEQESSQLEKDKKLLEKENKRLR
QQAEIRDSKLDDNNQRISTLEKENRTMGKEMIFFRDSCTRVKDLERENKELVKLGTIDKK
TLNALREELVSEKLRTQQMNNDLEKLTHELEKIGLNKERLLHDESSDDRFKLLETKLEST
LKSSLEIKEEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQREEEERMVQSSPPRG
GEDPQAFSKWEKESHEATRELLKVKDRLIEVERNNATLQAEKAALRSQLKQLETQSSNLQ
AQIVAVQRQTASLQENNTTLQTQNAKLQVENSTLSSKSASLMAQNAQLQSQQSSVEGERE
GALKDKEELRSTYEMLLRDHEKLAALHERQAAEYEALIGKHGGLKSSHKSLEQQHRDLED
KYKQLLQRKGELEDLEKNLKEQQEKMALENQTHQATAGQYKLLKEENERLNNTYRQLVKD
NENLQLDHKNTKSQLNSAKLDQTKLEAEFSKLKEQYQQLDITSTKLTNQCELLSQLKGNL
EEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ
YKFYDPSPPRRRGNWITLKMRKLIKPKSRERMRSLTLTPSRSESGDGFLMFPQDSQDSSS
IGSGSNSLDDTLTQKRSSRRRGQQPHAQGQGSTNAIKRLPFMRNRSKDKDKAKAIYRRSM
SMNDLLQTMAVAGGPGAQWANSIENLDGAEAGDAGMTGSSRRSGQRMKELAFSTNAIDCA
TLTLPTARHSRAKHRLQVKDNASCEDVAGSLDDPKSQGLQVYSSALAQCPSTVELSVICR
VPCSICSSRPTSLHSNRITSSNGNNNSQLSSPLEGKGTNGSLSRPHSESSGEFSLSLDQE
VWSSSGSSPVQQPTSSRSSHQSPLQLRRSLDPSTAAGIPGQTQVRKTGSPTNEVLSLQQF
LDEGIDPAESGSQENLTVDSPRLSTSSEHVQKERTTTKGRGILRSSSAKAAPVSSDRPPR
SAGQPGRPTLRKAESTRVRGSVPVRSSLSSQGKATSVSERLDSASSTLPRASSVISTAEG
TTRRTSIHDLLSKDSRQPVSVDASSPVASTKAGVRSQPTPSEYHPNSTNLKGPLTTITPL
PKSLSLPCHNLEDPDLSTLESFLGPSFTVESVFMDSIFSESAGKNLPFLSLNPTLVSNIS
GPPVPTKTHPPPIPNHISTQNQATHHSQSNGQMGTSPAISEYSKGVDPNCVNNPDQSLSP
EDNQSLWYEYGCV
NT seq
6162 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgaggtttttacccctttgctggagcagtttatgctcacgcctctggtctgc
tgggtgaagacagtcgggcaggcgacattggtcgatggcacccaattatcagaatatatt
gaattagtggatgggatttacctgaacgagataatgcttgagataaatcctaaggccacg
gtgcagaggaccaacaagaaggtgaacaatgacgcaacactgcgcatccagaacctttct
attctcatcaggcagattaaagcctactatcaggagactctccagcagctggtgatgatg
cctttaccaaacgtgctggtactgggccggaaccctttgtctgagcaaggcctggaggag
atgaaaaaactgttgctgctgctactaggctgtgctgtccagtgtgagaagaaggaagag
tacattgagtgtatccagactctggactttgacaccaaagctgccatagcatcccacatc
caagaggtgactcataatcaggagaacgtagtggacatgcagtggttggaaagtggggaa
atgcctcctgaggacctggacagcctctccagaaatctggcttttcacctcaaacgcctg
gtggatgagagggacacacagctggagactatagtggagttaacccaggagagagactgt
gtgcagctgtctccactggctccctgtccgacccagtctcccggtgactcccccagtatc
aggaggaccgaaagccgacagcacctctcagtggagttggctgatgccaaggccaagatc
agacgccttcgacaggaactagaggagaagagtgagcagcttatggacaccaggcaggag
cttgagaacatggaagtggagctcaaaaggcttcagcaagagagctaccagttactgtcg
gacgctcggtcggctcgggcctaccgtgatgagctggacgcactcagagagaaagcaatc
cgtgtcgataaactggagagcgagctgagccgatacaaggagagacttcacgacattgag
ttttacaaggccagagtcgaggagctgaaggaggacaaccaggtcctgttggagactaag
agcatgttggaggagcagctggatgctagccgtacccgctccgacaaactgcacctcctg
gagaaagagagtctgcagctgaaatccaagctccacgacctggagatggagcgggacatg
gaccgtaagcgtatggaggagctgttggaggagaaccttgtgcttgagatggcccagaaa
cagagcatggatgagtccctgcacctgggctgggagctggagcaactatccaagacacca
gatctgactgaagcccctcagaagtctctgggcgaggaggtgaatgagctgacctcaagc
cgcctgttgaagctggaaaaagacaaccagaccctgctgaagactgtggaggagctcaga
ggagcagccagtcaggacaccgtgacaaagctggccaaagtcagccaggaaaaccagaga
ctgaaccagaaattggagcagctggggagtgaactgacagcagacagagagtcgctcctt
agcgctgaatcactcagtactgacctgatgaaggagaaggctttactggagaagactctg
gaaacactcagagaaaactctgagagacagctgaagggcctggagcaggagaacaagcac
ctgagccagacggtgtcgtccctgcgtcagcgctgccaggttggtgctgaggcccgggtc
aaggatgtggaaaaagagaatcgcgttctccacgagtccatctgcgagacaaccgccaaa
ctcaacaagatggagtttgaaaggaaacaactacgtaaggagcttgaagtggtgaaggag
aaaggtgagagagcagaagagttggagattcagattcagaagctagaaagggacaatgac
agcctgcagaagaaagttgccagccttggaatcacctgtgaaaaggtgtcttctttggag
aaggagaacactgagctggaggcagagggccgtcgtctgaagaagaaactggacactctg
aagaacatggctttccagctggaggctctagaaaaggagaactcgcagctggagcaggag
aacctggagcttcggcgctcagcggagagtctccggtcagcgggagctaaggccgctcag
ctggaagccgagaacagggagctggagagcgagaggagccagatgaagcgcagcctggaa
ctgctcaaggcctcgtccaaaaagacagagagattagaggtgagttaccagggcctagat
acagagaaccagcgcctgcagaaggctttagagaacagcagcaagaagattcaacacttg
gaggcagagctgcaagaggtggagactgagaaccaaaccctccaacgcaacctggaggag
ctcaagatctccagtaaacgcctggagcagctggagcaggagaacaagactctggagcag
gaaagctcccagctagagaaagacaagaagctactggagaaggagaacaagcggctgagg
cagcaggccgagatccgcgactccaagctggatgacaacaaccagcggatctccaccttg
gagaaagagaatcgcaccatgggcaaggagatgatcttcttcagggactcctgcacgaga
gtcaaagacctggagagagagaacaaggagctggtcaaactgggcaccatcgataagaag
accctcaatgcactcagagaggagcttgtgagtgagaagctgcggactcagcagatgaat
aatgatctggagaaactgacccatgagttggaaaagattggactgaacaaagagaggctg
ctgcatgacgagagctctgacgacaggtttaagctcctggaaaccaaattggagtcgact
ctgaaatcatctttggagattaaagaggagaagatcgccgccctagaggccagactgcag
gagtcctccaacctcaaccagcaacttcggcaggagctcaagacagtgaagaagaactac
gaagcgctgcgtcaaagggaggaggaggagaggatggtgcagagctcgccccctagagga
ggggaggaccctcaggctttcagtaaatgggagaaagagagtcatgaagccaccagagaa
ctgctgaaagtcaaagacagactcattgaggtggagaggaataatgccacgctacaagct
gagaaggcggccctgaggagccaacttaaacaactggaaactcagagctccaatttgcag
gctcagatagtggcagtgcagagacagactgcttctttacaggaaaacaatacgacacta
cagacacagaacgccaagctgcaggtggagaactccactctgagctcgaagagtgcatcc
ctcatggcccagaacgcccagctgcagagccagcagagcagcgtggagggtgagcgtgag
ggtgctctgaaggacaaagaggagctcaggtccacctacgagatgctcctccgcgatcat
gagaagctggcggcgctccacgagaggcaggcggccgagtatgaagctctgatcggaaag
cacgggggcctgaagagctcccacaagagcctggagcagcagcaccgagacctggaggac
aagtacaagcagctcctgcagaggaagggggagctagaggatctggaaaaaaatctgaag
gagcagcaggaaaaaatggcgctggagaatcaaacgcaccaagccacagctggccagtac
aaactgctcaaagaggaaaatgaaaggctgaataatacctatcgtcagctggtgaaggac
aacgagaatctccaactggaccataaaaacacaaagagccagctgaacagcgccaagctg
gaccagaccaagctggaggccgaattctctaaactgaaggagcagtaccagcagctggac
atcacctccaccaagctcaccaaccagtgtgagttgttgagccagctgaaaggaaacctg
gaagaggagaatcgccacctgttggaccagatccagactctgatgctacagaatcgcact
ctgctggagcagaccatggagagcaaggacctgttccacgtagagcaaagacaatacatt
gacaagctgaatgagctgaggagacagaaagagaagctggaggagaagatcatggaccag
tacaagttctacgacccctcacctccacgcaggcgtggcaactggatcactttgaagatg
aggaagttgatcaagccgaagagccgggagagaatgcgctctctcacgctgactccctct
cgctcagagtctggcgacggtttcctgatgtttccccaggacagccaggacagctcgtcc
ataggctctggctccaactcgctggacgacacacttacacaaaagaggagcagcaggagg
agagggcagcagccccatgcccaagggcagggttctaccaatgctataaaaaggttgcct
ttcatgaggaacagatccaaggacaaagacaaggccaaggccatctaccggcgctccatg
tccatgaatgacctgctgcagaccatggcggtggcgggcggtcccggggctcagtgggcg
aacagcatcgagaacctagacggcgctgaggccggagatgctggcatgacgggcagcagc
aggcgcagcgggcagcgcatgaaggagctcgccttttccaccaacgccatcgactgtgcc
accctcaccctgcctactgcaaggcatagcagggccaagcaccggcttcaggtcaaagat
aatgcctcctgtgaggatgttgctggctccttagatgaccccaagagtcaaggcctgcag
gtgtatagcagtgctctggctcagtgtccttctactgttgagctgagtgttatttgcagg
gtgccctgtagcatctgttcctccagacccaccagtctccatagcaacaggatcaccagt
agtaatggtaacaataactcccaactctcttctcctctggagggcaaaggcacgaacggc
agcctcagcaggcctcacagtgagagcagcggagagttcagcctgagtttggaccaggag
gtgtggtccagcagcggcagcagcccagtccagcagcccacctcctcgcgctcctcccac
cagagccccctgcagctgcgcaggtcgctcgacccgtccactgccgcaggcatccctggc
cagacccaggtcaggaagacgggatccccgaccaacgaggtgctttccctgcagcagttc
ctggatgagggtattgatcctgcagagtccggcagtcaggagaacctcactgtagactct
cctcgcctctccacttcttctgagcatgtgcagaaagaacgcactaccacaaagggccga
ggcatattgcgctcatccagtgcgaaagcagcgccggtcagctctgatcgcccaccgaga
tcggccggacaaccgggtcgcccaaccctgcgtaaggcagaaagcacccgtgtgagaggc
tccgtcccagtccgctccagcctatcatcgcagggcaaagccacgtctgtgtctgagcgc
ctggactctgcttcctccacgctgccccgggccagcagcgtcatctccactgctgagggc
accactcggcgcaccagcatccacgacctgctctcaaaggacagccggcagcccgtgtca
gtcgatgcttcttctcccgtcgcctccaccaaggctggggtacgctcccagcctacgccc
agtgagtaccaccccaacagcaccaatctaaagggaccccttaccaccatcactcccctg
cccaagtcactcagcttaccttgccataacttggaggatccagacctctccacccttgag
tctttcctcggcccttccttcacagtagagtcggtgttcatggactccatctttagtgag
tcggcgggcaaaaacctccccttcctgtctctaaaccccaccctagtcagcaacatcagt
gggcctcctgttccaactaaaacacaccctcctcctatccccaaccatatttccacccaa
aaccaggcaacccatcacagccaatcaaatggccagatgggaaccagcccagccatatct
gaatatagcaagggcgttgatcccaattgtgtgaataatccggaccagtcactgagccca
gaggacaaccagtctctgtggtatgagtacgggtgtgtgtga
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integrated database retrieval system