Sander lucioperca (pikeperch): 116061755
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Entry
116061755 CDS
T07345
Symbol
thumpd2
Name
(RefSeq) THUMP domain-containing protein 2
KO
K28400
U6 snRNA (guanine-N(2))-methyltransferase THUMPD2 [EC:2.1.1.-]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116061755 (thumpd2)
Spliceosome [BR:
sluc03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
116061755 (thumpd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0020
Methyltransf_25
Methyltransf_11
Methyltransf_31
THUMP
MTS
Ubie_methyltran
Methyltransf_18
PrmA
Methyltransf_12
N6_Mtase
FtsJ
TRM5-TYW2_MTfase
RapA_C
N6_N4_Mtase
Motif
Other DBs
NCBI-GeneID:
116061755
NCBI-ProteinID:
XP_031171965
Ensembl:
ENSSLUG00000010676
LinkDB
All DBs
Position
15:27811177..27818044
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AA seq
614 aa
AA seq
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MTDARSEASLVRYYCTAGNGMEHFLIDEVKRKLAAEDVCQMPGKVLFSSSVGINRVSELK
AAERLFLLLKQDLPVQLSANTNPAKAASVLQSRVLGDKNHWTSAVMTWSHLQGELEGRRT
TVNPSSTALGVTMKKEEGSRIEEQRGKEEEEKCDEEKKSKRETAQRGEMSSGETCGAEAQ
ILEKKRKRDSEEKESNSDKKAEKQRTSEKERKGQYKEDDEEGRSRVMEFNSCGQNEKRAM
ISDTDLYSRGSVCVNATPEQDHNLERSCMKMDDMAKDFAVKNVGHVKTTGGRGIKPEPSS
PDPVSFRISCKCTGSLSRYFNTQEVSRVIGVGLSKLLGWKTDLKNPQLEVNVNLSDDHCL
LGIPLTRLPLAHRSYIKTTGLRSTVAWAMASLAQIQPGFCVVDPMCGVGTILIEAAQEHK
ASHFLGMDIDDGQLLKAKENVEFAVLGNRIHLLKASSMMLPLPSASVDAVVCDLPFGRKF
GTKTTMAANLPLILTEMERIICIGGTLVLLLSPQLSCLLKKLLAQTDSGPTSNQETKPQT
GIQDCPSLSPSCSKQQTFQIVQGVNSPPTQKTDPWSVLQHSLPPPLSSLKHQATLRVSLG
AIDGLIHKYVKTET
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgccagaagtgaggcgagtttagttcgctactactgcaccgccggcaacggg
atggagcatttcttaatcgacgaggtgaagcggaagctggcagcagaagatgtgtgtcag
atgccaggtaaagtgttgttcagctcctctgtggggatcaacagagtcagtgagctcaaa
gctgcagagagactcttcctcctgttgaaacaagacttgcctgtgcagctatctgctaac
accaacccagcaaaagcagcctctgtgctgcagtccagagtgttgggtgacaagaaccat
tggaccagtgctgtaatgacatggagccacctgcagggggagctggaaggcagaaggact
actgtcaacccatcaagcactgccctgggagtgacaatgaagaaggaggaggggagcagg
attgaagaacagaggggaaaggaggaggaggagaagtgcgatgaggaaaagaagagtaag
agagagacagcacagagaggggaaatgtcgagcggtgaaacctgtggagcggaagcccag
atactggagaaaaagagaaagagggattctgaagaaaaagagtctaatagtgacaaaaag
gcagagaaacagaggacatctgagaaagaaagaaagggacagtacaaagaggatgatgaa
gaggggaggagtagggttatggagtttaatagctgtggacaaaatgaaaaaagagcaatg
atatcagacactgatttgtatagcagaggatcagtttgtgtcaacgcaacaccagaacaa
gaccacaatctggaaagaagctgcatgaagatggatgacatggcaaaggactttgctgtg
aaaaatgtgggacatgtgaagactaccggaggaagagggatcaaaccagagccttcttct
cctgacccggtctcttttaggattagctgcaaatgtactggatctctgtcacgatacttt
aatacacaggaggtgagcagagtgattggagtaggcctgagcaaactgctgggctggaag
actgacctgaagaatccacagctggaggtaaatgttaatttgagtgatgaccactgcctg
ctggggatcccactaaccaggctacctctggctcaccggagctacattaaaaccacagga
ctgagatctactgtagcctgggctatggcctcattggctcagatacagccaggcttctgt
gtggtcgacccaatgtgtggggtgggaaccatcttaatagaagccgcacaggaacataag
gcgtcccattttctgggtatggacattgatgatggacagctgctgaaggccaaagagaac
gtagagtttgcagtgctgggaaacaggatacacctgctgaaagcttcatctatgatgctg
cctctgcccagcgccagtgtagatgctgtagtctgtgacctgccatttggcaggaagttt
ggcaccaaaacaacaatggctgccaacctgccactcatcctcactgagatggagagaatc
atctgtataggtggtaccctggttctccttctgagtcctcagttatcttgtctcctgaaa
aaactcctggcacagacagactctggaccaacgtctaaccaggaaacaaagcctcaaact
gggatacaagactgcccatctctttctccatcttgctcaaagcagcagacattccaaatc
gtccagggggtcaactccccacctacccagaaaacagacccttggtctgtgctacaacac
agtctgcctccccctctctcctccctgaagcaccaggcaactcttagagtcagcttaggt
gcgatagatggacttatccataaatacgtcaagacggaaacttga
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