Sander lucioperca (pikeperch): 116061837
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Entry
116061837 CDS
T07345
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116061837
Spliceosome [BR:
sluc03041
]
Common components
Common spliceosomal components
General mRNP proteins
116061837
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_5
RRM_occluded
RBD_DEAH11
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
116061837
NCBI-ProteinID:
XP_031172061
Ensembl:
ENSSLUG00000020924
UniProt:
A0A8D0D968
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Position
6:complement(14328880..14338362)
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AA seq
495 aa
AA seq
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MADDLDIEEMLDAPYRKDEPKNLSPNGEEERTKKKKRSRSRDKKRSRSRDRKRSRSRERK
RSRSRDKRRSRSRERRGSRERGGRYRDHHKHRRRSKSKSPVRKEKSPVRLPVDTLTPEER
DARTVFCMQLAARIRPRDLEDFFSAVGNVRDVRMISDRNSRKSKGIAYIEFVEATSVPLA
IGLTGQRLLGVPIIVQASQAEKNRAAAAAAANSLQKGSAGPMRLYVGSLHFNITEEMLRG
IFEPFGRIESIQLMMDSATGTSKGYGFITFSDADCAQKAMEQLNGFELAGRPMKVGNVTE
RTDSSASFLDSDDLERSGIDLGTTGRLQLMARLAEGSGLQMPPAAQQALQMSGVIAIGAM
AAVSAAMNPGLNMNSGAMNLPSQPLATHCFQLSNMFHPNSEKPPGWEIDIQHDVIEECNK
HGGVVHVYVDKNSAQGNVYVKCPSIPAAMAAVNALHGRFFAGKMITAAFVPLPAYHHLFP
ESATANQLLVPPTRR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacctggacattgaagagatgctggatgctccgtacaggaaggatgaaccc
aagaacctgagccccaacggagaggaggaacgaaccaagaagaagaagcgcagccgcagc
cgcgacaagaagcgcagccggagtcgagacaggaagcgcagccgcagccgagagcgtaaa
cgcagccgcagccgagacaagagaagaagtcgcagcagagagcgccgcggcagtagagag
aggggcggccgctaccgagaccaccacaagcaccggcggcggtccaagagtaagagtcct
gtgaggaaggagaagagtcccgtcaggctccccgtagacacgctgactccagaggagcgg
gacgcccgcaccgtgttctgcatgcagctggcggccaggatccgcccgcgagacctggag
gacttcttctccgctgtggggaacgttcgggatgtgaggatgatctctgacaggaactcg
cgcaagtcgaagggcatcgcctacattgagtttgtggaggcaacatcggttcctctcgct
atcgggctgacggggcaaaggctgctgggagttcccatcatcgtacaggcctcacaggcg
gagaagaaccgagcggctgcagcagctgcggccaacagcctgcagaagggatctgcggga
ccgatgaggctttacgtcggctctctgcacttcaacatcaccgaggagatgctgagagga
atctttgagccgtttggacggattgagagcatccagctgatgatggacagtgccacggga
acctctaaaggctacggcttcatcactttttcagacgccgactgtgcccagaaagcgatg
gagcagctgaacggctttgagctggcgggtcggccgatgaaagtaggaaacgtgacggag
cggaccgactcgtcggcctcgttcctcgacagtgacgatctggaacgctccggcatcgac
ctcgggaccaccggacgcctgcagctgatggcccggctcgctgagggttcaggtctacag
atgcctccagctgctcagcaggctctgcagatgagtggagtgatcgctatcggagccatg
gctgctgtgtcagctgcgatgaatccgggtctcaacatgaactctggtgcgatgaatctt
ccctctcagccgctcgctactcactgcttccagctctccaacatgttccacccaaacagt
gagaagcctcctggctgggagatagatatacagcatgatgtcatcgaggaatgtaacaaa
catggaggagtcgtccacgtctatgtcgacaaaaactctgcacagggaaacgtttacgtt
aagtgtccgtcgatccccgccgccatggccgccgtcaacgctctgcacggacgattcttt
gccggcaagatgatcacggcggcgttcgttcctctgccagcctaccaccacctgttcccg
gagtctgccacagccaatcagctgctggtcccgcccacaaggcggtga
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