Sander lucioperca (pikeperch): 116061866
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Entry
116061866 CDS
T07345
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a isoform X2
KO
K05636
laminin, beta 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04510
Focal adhesion
sluc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116061866 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116061866 (lamb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
116061866
NCBI-ProteinID:
XP_031172096
Ensembl:
ENSSLUG00000021233
LinkDB
All DBs
Position
7:complement(22858339..22896899)
Genome browser
AA seq
1795 aa
AA seq
DB search
MLELALLLALQVCSGGAQGGGASVDDVSLPELSDVCTEGSCYPATGDLLIGRAHQLSSTS
TCGLNRPEPFCIVSHLQEEKKCFLCDSATLYDQLSEQTSGHRIENVVTTFAPNRLKTWWQ
SENGVENVTVQLKLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWKVYRYFAYDCETS
FPTVSHGPMQKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNMLKITDL
RVKFTKLHTLGDNLLDSRVEIKEKYYYAVFDMVVRGNCFCYGHASECAPVQGTGQAAEGM
VHGHCMCNHNTKGLNCEQCQDFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFDMAMFVA
SGNVSGGVCDDCQHNTAGPNCQQCQPFFYQHPERDVRDPNICQLCNCDPLGSLNGGICDG
LTDVRAGLIAGQCRCKVNVEGEHCERCKLAHYGLSDTPEGCMACSCSPVGTLPGGNPCDS
ETGSCFCKRLVTGRDCDQCVAEHWGLSNDMDGCRPCDCDLGGAINNQCDQVSGQCVCRDH
MFGRRCDQVQSGFYFIALDHYTYEAEDAKFGPGVTVVPRPHPLDRSPTWTGIGLVNVPEG
AFLEFSVDNIPHSMEYDIIIRYEPQLPDQWEEVLMTVMRPGPIRADSRCVNTVPDDDHQM
ISLHPGSRYVALPRPVCFESGLNYTVRLSLPLYSAVSDVQSPYTLIDSIVLMPHCKNLEI
FTGSSEEGESSGNSGWEIFQRYRCLENSQGVIKSQMTDICRNFIFSISAMLHQGAKECQC
DPQGSLSTVCDPSGGQCRCRPNVVGRNCDRCSPDTFQFGPNGCRACACDPQGSQSSFCDQ
LSGQCVCVSGAYGRQCERCLPGHWGFPTCRPCSCNGHADDCQADTGRCFNCRDHSTGHTC
DRCLDGYYGDPVLGSGDHCRPCMCPDGPGSLRQFAGSCYRGDDSQQAVCVCNTGFRGARC
DECSPGYYGNPGEVGGQCQPCQCNNNIDMLDPESCDAQTGECLRCLYHSEGAACQSCKLG
YYGNALLQDCSKCVCNRLGSEPSSCPPSGDCDCDRRSGQCRCLPNVTGQHCDRCAADTWN
MASGHGCQACDCDAKHSYETSCNEISGQCSCQPGFGGRTCSECRELFWGDPEVKCHACDC
DPRGTAAPQCNHGSGHCVCVDGVSGPRCDVCARGFSGTFPDCQRCHQCFSEWDTVIGQLS
NQTHRLVNKVNAIRASGVSGPYRKSIDSLERSAADIRLILNQNPAEQPLIHVQDLLQQAS
DLMGALSQTLNHTEQTLVRLQEEDSAAGNKLDSVTADAQKLERTVLELLDQVQFIKNSNI
RGATDSVTKYFLQSQASEARANASTIEAGSAVETSGALRQLTEDKLNRTREEFLRRHTEH
AQKLDDLAGELQTLDQSEISHKTCGRPSSDQDSCSSSPCGGLGCMDSEGKTRCGGKGCDG
VVTKADSVWRQARDSEQEIISAMEEVEKLSKMVSEAKLKADEAKLSAQDVLMKSNRTKQK
VQQSNEELRGLIRQIRDFLTEDAADLESIELVANEVLAMQMPSTPAQLQNLTEEIRQKLG
ELGHVENILQQSAADIQRAQNLLDQARTASEEAAYVKDSAEKVKKSLEEAQRAQSAASSA
IQQAAADIQNTNTLLSSVEMETADAELKLSNATQRLQRLEQDVTLLRDKGLNVSASAEQT
NQDAASIRQMADELKKDLDLELKDKYTTAEKLIGQKAGGVAEAKKRAESLQQEAKQLLLK
ASDKLQLLKDLEKSYEDNQRTLDLKAEQLVQLEAAVKKLLQDISNQVSVYSTCLF
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgttggagctcgcgctgctgctcgccctgcaggtgtgctcaggaggcgcccaggggggc
ggggcctcggtcgatgatgtcagcctccccgagctcagtgatgtgtgcacagagggcagc
tgttacccggcaacaggagaccttctgattggccgagcccaccaactgtcgtccacctct
acctgcggactgaaccgccccgaaccgttctgcatcgtgagccacctgcaggaggagaag
aagtgcttcctgtgcgactcggcgactctgtacgatcagctgagcgaacagaccagcggc
catcgcatcgagaacgttgtcacaacgttcgctcccaacagactgaagacctggtggcag
tctgagaatggtgtggagaacgtcacagtgcagctgaagctggaggccgagtttcacttc
acacatctcatcatgacctttaagacgtttcgaccagctgccatggtgatcgagcggtca
gctgactttgggaagacgtggaaggtttaccgttactttgcctatgattgtgagacctcg
ttcccaacggtttcccacggtccaatgcagaaggtcgatgatgtcatctgtgactcgcgt
tactcggacatcgagccgtccactgaaggagaggtgattttccgagtcctggacccggcg
ttcaggatcgatgacccctacagcccccgaatccagaacatgttgaagatcacggacctg
cgggtgaagttcaccaaactgcacacacttggagacaacctgctggactcccgcgtggag
atcaaggagaagtattactacgccgtcttcgacatggtggtccgaggaaactgcttctgc
tacggacacgcctccgagtgcgccccggtccagggaaccggccaggccgccgagggcatg
gtccacggtcactgcatgtgtaaccacaacactaaaggtctgaactgtgagcaatgtcag
gacttctaccacgacctgccgtggagacccgccgagggacgcaacaccaacgcctgcaaa
aagtgtaactgtaaccagcactcagactcgtgtcacttcgacatggccatgttcgtggct
tcaggaaacgtcagcggaggagtctgtgacgactgtcagcacaacacagccggacccaac
tgtcagcagtgtcaaccgtttttctaccaacaccccgagagagacgtccgagaccccaac
atctgccagctgtgtaactgtgaccctctgggctctctgaacggaggaatctgtgacggc
ctgacggacgttcgagccggtctgatcgctggtcagtgtcgctgtaaagtcaacgtggaa
ggagaacactgcgagcgctgcaaactggcgcactacgggctgagtgacacgcctgaaggc
tgcatggcgtgcagctgcagcccggtgggaactcttcctggaggaaatccctgcgacagt
gaaacaggaagctgcttctgtaaacgtctggtgacgggacgagactgtgaccagtgtgtg
gctgaacactggggtctcagtaacgatatggacggctgcagaccatgtgactgtgaccta
ggaggagccatcaacaaccagtgtgatcaggtgagcggtcagtgcgtctgcagagatcac
atgttcggtcgacgttgtgatcaggtccagtctggattctacttcatcgctctggatcac
tacacctacgaggccgaggacgccaagtttggacctggagtgacggtggtgccgcggccc
caccctctggaccgcagtcccacctggacaggtatcggcctggtcaacgtcccagagggg
gccttcctggagttctccgtggacaacatcccccactccatggagtacgacatcatcatc
cgctatgaacctcagctgcccgaccaatgggaggaggttctgatgacagtgatgagacct
ggacctatcagagcagacagtcgctgtgtcaacacggttcctgacgacgaccaccagatg
atctcacttcatcccggctcacgatacgtggctcttcccagaccggtttgttttgaatct
ggtctgaactacacggtccgcctcagtctgccgctctactcggccgtcagcgacgtccag
tctccgtacacactcattgactcgatcgtgttgatgcctcactgtaagaacctggagatc
ttcacgggatcttcagaagaaggagagtccagcgggaacagcggttgggaaatttttcag
cgttatcgttgtctggagaacagccagggcgttatcaagtcgcagatgaccgacatctgc
agaaacttcatctttagcatctctgccatgctgcaccagggagccaaagaatgccagtgt
gatcctcagggctccctgagcacggtgtgtgatcccagcggcggtcagtgtcggtgtcgg
cccaacgtggtcggcaggaactgtgacagatgttctccggacaccttccagttcggaccc
aacggctgcagagcctgtgcgtgcgatcctcagggctctcagagttcgttctgcgatcag
ctgagtggtcagtgcgtctgtgtttccggagcgtacggtcggcagtgtgagcgctgtctg
ccaggtcactggggcttcccaacctgccgaccctgctcctgcaacggacacgccgacgac
tgccaggccgacacgggacgctgcttcaactgcagggaccacagcaccggacacacctgt
gacaggtgtctggatggttactatggcgacccggtgttggggtcaggtgaccactgtcgc
ccctgcatgtgtcccgacggccccggcagcctgcggcagtttgcaggaagctgttaccgt
ggcgacgactcccagcaggccgtctgtgtctgcaacaccggattcagaggtgctcgctgt
gacgagtgctcccctggttactatggaaaccccggggaggtgggagggcagtgtcagccc
tgtcagtgcaacaacaacatcgacatgttggaccctgagtcctgcgacgcccagactggc
gagtgtctgcgctgcctttaccacagcgagggcgccgcctgccagagctgcaagctgggt
tactacggcaacgccctgctgcaggactgtagcaagtgcgtctgtaaccggctgggcagc
gagccctccagctgcccgccgtccggagactgtgactgcgatcgccgcagcggtcagtgt
cgctgcctccccaacgtgacgggccagcactgcgaccgctgcgccgctgacacctggaac
atggcgagcggccacggctgtcaggcctgcgactgcgacgccaaacactcatacgagacg
tcctgcaacgaaatcagcggtcagtgctcctgtcagcccggcttcggaggaagaacatgc
agcgagtgtagagagctgttctggggagacccggaggtcaaatgtcacgcgtgtgactgc
gaccctcgcggcacggcagcgccgcagtgtaaccatggcagcggtcactgcgtgtgtgtg
gatggcgtgtctggcccacgctgcgacgtctgcgcccgcggcttctccgggacgttcccc
gactgccagcgctgccaccagtgcttttccgagtgggacaccgtcattggccagctgtcc
aatcagacgcaccgcctggtcaacaaggtgaacgccatcagagctagcggagtcagcggg
ccgtacaggaagtccatcgacagcctggagaggagcgccgccgacatccgactcatcctg
aaccagaacccggcggagcaaccgctgatccatgtccaggaccttctgcagcaggccagt
gacctgatgggggccctgagccagacgttgaaccacactgagcagacgctggtccggctg
caggaagaagactcggctgcaggaaataaactggactctgtgacagcggacgctcagaaa
ctggagcgcacagttctggagctgctggaccaggtccagttcatcaagaactccaacatc
aggggggcgacggacagcgtcactaagtacttcctgcagtctcaggcgtctgaagctcga
gccaacgcctccaccattgaggccggcagcgccgtggaaacctcaggcgctctacggcaa
ctcacagaggacaaactgaaccgaaccagagaggagttcctgaggagacatactgagcat
gctcagaagctcgatgacctggcaggagagctgcagactctggaccaatcagagataagc
cataagacctgtggcagaccatcctcggatcaggactcgtgctcgtcctctccctgtggc
ggtctggggtgcatggactcagagggtaagacccggtgtggcggcaaagggtgtgatggc
gttgtgacgaaggccgacagcgtctggaggcaggcccgagactctgaacaggaaatcatc
agcgccatggaggaagtggagaaactctccaagatggtgtcagaggcaaaactgaaagca
gacgaagcgaagctcagcgctcaggacgtcctaatgaagtccaacagaaccaaacagaaa
gtccagcagagcaacgaggagctgagaggcctcatcagacagatccgagacttcctcaca
gaggacgctgcagacctggagagcatcgagctagttgctaacgaggttctggccatgcag
atgccgagcacgccggctcagctgcagaacctgaccgaggagatccggcagaagctggga
gagctgggacacgtggagaacatcctgcagcagagcgccgctgacatccagagagcccag
aacctgctggaccaggcccgcacagccagcgaggaggcggcgtatgtgaaggactctgca
gagaaggtgaagaaatctctggaagaagctcagagagctcagagcgctgccagcagcgcc
atccagcaggctgccgccgacatccagaacaccaacaccctgctgtcctccgtggagatg
gagacagcagatgcagagctaaagctctctaacgccacccagaggctgcagagactggag
caagacgtgacgctgctgagagacaagggtctgaacgtctctgcaagcgccgagcagacc
aatcaggacgcagcgagcatcagacagatggcagacgagctgaagaaggatctggacttg
gagctgaaggataagtacaccacagcggagaagctaattggtcagaaggcagggggtgtg
gccgaggccaagaagagggcggagtctctgcagcaggaagccaaacagctgctgctgaag
gccagcgacaagctgcagctgctcaaagatctggagaagtcttacgaagacaaccagcgg
actctggatctgaaggcggagcagctggtgcagctggaggccgccgtcaagaaactgctg
caggacatcagcaaccaggtgtccgtctacagcacctgtctgttctag
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integrated database retrieval system
