Sander lucioperca (pikeperch): 116061883
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Entry
116061883 CDS
T07345
Name
(RefSeq) double-stranded RNA-specific editase 1-like isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116061883
Spliceosome [BR:
sluc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116061883
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
RPC5_C
Motif
Other DBs
NCBI-GeneID:
116061883
NCBI-ProteinID:
XP_031172114
Ensembl:
ENSSLUG00000003009
LinkDB
All DBs
Position
24:19420250..19444719
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AA seq
752 aa
AA seq
DB search
MALLPDAAAVCCVIRRRCQGGRRRRRKRRCERRGRVGDRLPPNQQRLLTVDRDEVKSMSS
RRTDVKENRNSDNLFSKEGVAADATRLPNGSAGGGRKRKRPLEEGNNGHTHSKYRPKKCK
KVTGPILPKNALMQLNEIKQGLQYKLLSQTGPVHAPVFAMTVEVNGLLFEGSGPTKKKAK
LNAAEKALCSFVQFPNAPKVHRVMGRTLSGHTDFTSDQADFPDMLFNAFETSSPVDDPFC
LASNSSFGIKYPLLPSPDPPLPPHPMGTPLPLASSDFMSPTSSKNPVMILNELRPGLKYD
FVSEIGVSHGKNFVMSVTVDAQNFQGSGRNKRLAKVRAAQVALFSLFNMQLDQAPSRQPI
PREGLQLHLPQVLADAVSRLVVEKFSELTEDFTAPHAQRKVLAGVVMTIGADVKEAQVIC
VSTGTKCINGEYMSDRGLALNDCHAEVLARRSLVRFLYSQLEHFLSDQEEEQQKSIFTQC
EHRRGFRLKENVQFHLYISTSPCGDARIFSPHEAAMEDQGDRHPNRKARGQLRTKIESGE
GTIPVRSSNTIQTWDGVLQGERLLTMSCSDKIARWNVVGLQGSLMSYFTEAVYFSSIILG
SLYHADHCSRAMYQRITEIQDLPQSFSLNRPLLSGITNVEARQPGKAPNFSMNWTLGDPG
LEVINATTGKDDLGRPSRLCKHALFSRWMRLHCKLSSSLRIRTVRPGSYQEAKAAAAEYH
SAKQTLFRAFHTAGLGTWVKKPVEMDQFALAD
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggctctgctgccggacgctgctgccgtctgctgcgtgatccgccgccgctgccagggg
gggcggcggaggaggaggaagagacgctgcgagcgcagaggtcgagtgggagatcggctt
cctccaaaccaacagaggctcctcaccgtagacagggacgaagttaaaagcatgagttca
cgccgcacagatgttaaggaaaatcggaactctgacaacctcttctccaaagagggggtt
gcagctgacgctactcggctccccaatgggagtgctgggggtgggaggaaaaggaaacgt
cccttagaggagggcaataatgggcatacccattccaagtacaggcccaagaagtgtaag
aaagtcactgggcccattctgcctaagaatgccctaatgcagctaaatgagatcaagcaa
gggctgcagtacaaactgctctctcagaccgggccggtccacgcgcccgtcttcgcgatg
accgtagaggtcaacgggctgctcttcgagggttctggtcctacgaagaagaaggccaag
ctgaacgcagcggagaaggccctgtgctccttcgtgcagttccccaacgcgcccaaagtg
cacagggtcatgggccggactctgtctggtcacacagacttcacctcggaccaggcggac
tttcctgacatgctcttcaacgcctttgagacatccagtcccgtagatgacccgttttgc
ctcgcatccaacagctctttcggaatcaagtacccattgctaccctcccctgacccacct
ttacccccacaccctatggggacacccttacccctagcgtcgtccgacttcatgtcccct
acaagcagcaagaaccctgtcatgatcctgaatgagttgcggccaggcctaaagtatgac
tttgtgtcagagatcggggtgagccacggcaagaactttgtcatgtccgtgaccgtagat
gcgcagaacttccagggttctgggcggaacaaaaggctggccaaggtccgggctgcacag
gtggctctgttttctctgtttaacatgcagctggatcaggctccgtccagacagccgata
cccagagaaggactgcagcttcacctgccacaggtcctggcagacgccgtctctcgcctg
gtcgtcgaaaagttcagcgaactcaccgaggacttcacggctccacacgctcaacggaaa
gttctggctggtgtcgtcatgacaataggcgcggatgtgaaggaggctcaggtgatctgc
gtttccacgggaacaaagtgcatcaacggggaatacatgagcgacagaggtttggccctc
aatgactgccacgctgaggttttggctcgccgctcgctcgtccggttcctgtactcgcag
ctggagcatttcctcagtgaccaggaagaggagcagcagaagtccatcttcacccagtgt
gaacacagacgaggttttagactgaaggaaaacgttcagttccacctttacatcagcaca
tcgccctgcggagatgcccgcatcttctctccgcatgaagccgccatggaggatcagggt
gatagacacccgaacagaaaggcccgcgggcagctgcgcactaagatcgagtctggtgaa
ggaaccatcccagtccgctccagtaacaccattcagacgtgggacggggttctccagggt
gagaggctgctcaccatgtcctgcagtgacaagatagccaggtggaacgtggttggactg
caaggctctctgatgagctacttcaccgaggccgtctacttctccagcatcatcctgggc
agcctgtaccatgcagaccactgctccagagccatgtaccagaggatcaccgagatccag
gacctgccgcagtccttcagcctcaacagaccgctgctcagcggaatcacaaacgtggag
gctcgtcagccaggaaaagctcctaacttcagcatgaactggacgctgggagacccaggc
ttggaggtgatcaatgccaccacggggaaagatgatctgggccgaccctcgcggctctgc
aaacacgctctgttcagccgctggatgcgcctccactgcaagctgtcgtccagcctgcgg
atccgaacagtgcggcctggcagctaccaggaggcgaaggcggcagcggcggagtaccac
agcgccaagcagacgctcttcagagctttccacacagccgggctgggcacctgggtgaag
aaacccgtagagatggaccagtttgctctcgccgactga
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