Sander lucioperca (pikeperch): 116061976
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Entry
116061976 CDS
T07345
Name
(RefSeq) cadherin-4-like
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116061976
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sluc04515
]
116061976
Cell adhesion molecules [BR:
sluc04515
]
Cadherins
Major cadherins
116061976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_FAT4_N
DUF2254
DUF5527
Motif
Other DBs
NCBI-GeneID:
116061976
NCBI-ProteinID:
XP_031172215
Ensembl:
ENSSLUG00000003193
LinkDB
All DBs
Position
12:complement(28268186..28523987)
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AA seq
934 aa
AA seq
DB search
MRTDFALVLTAALLLDTFWRNNGEHASKDPCRPGFSQSFYSVLISRDVLQSQGILKDTTV
SSQKVKFNDCMGNEAVVFQSSDPFFSVQTDGSIFAQGEGASLDEPVQFKLTASGPHTRVW
ETVVQLALIDSPSPQQNENEVTKEEGKVAERKERKEESQAPPPVIMFSGSGLNSSKGLRR
QKRDWVIPPINVAENSRGPFPQMLVSIRSDQDKDISIRYSITGVGADQPPNEVFNIDPVL
GKMFVTKPLDREHRSSYHLRAHAVDMNGNQVENPIDLYIFVIDMNDNRPEFKNQVYNGSV
DEGSKPGTYVMHVSAFDGDDNTTANGMVRYRILSQMPHTPIPNMFTINSETGDIVTVAPG
LDREKVSQYTIIVQATDMEGNLNFGLSNTATAIITVTDINDNPPMLTSRTFSGEVPENRV
DLVVANLTVIDADQPHSPNWNTIYRIISGDPSGHFTIRTDPVTNDGMVTVVKPVDFEMNR
AFMLTVVVSNQAHLASGIQSSLESTAGVTISVQDVNEPPYFPTNPKHIRFEEGVPAGTSL
TTFSASDPDRLQMQQTIRYSKLNDPADWLSINRTNGQIVTTAMLDRESIYVKNNIYEATF
LATDNGSPAASGTGTLQIYLIDINDNPPALIPRESQICERVNKNVHGVNITAADADTDPN
AGPFVFELPNFPTSIRRNWTISRISGDYARLGLRYQIYLEPGVYEVPVIVSDSGNPPLSN
RSVIKVKVCPCDEHGDCTTLGAVAAAGLGTGAIISILICIIILLSMVLLFVVWIKRREKE
RHTKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDSLEHIISKPPGVRRVDER
PIIPESQYPIRPVVPHPGDIGDFIHEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSS
LNSSSTGDQDYDYLNDWGPRFKKLADMYGGGDDD
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagaactgacttcgctctggtcctgacagcagcccttcttcttgacacattctggagg
aataatggggagcatgcttccaaagatccctgccgacctggcttctcacaaagcttctac
tctgtgctgatttcaagggatgtactgcaaagccagggcatacttaaagataccacggtg
tcatcacaaaaagtgaagttcaatgactgcatggggaatgaagctgtggttttccagagc
agtgaccctttcttcagcgtgcagacagatgggtccatctttgcccagggagagggagcc
agcctggacgaacctgtccagtttaaactgacagcaagtggtccacacacacgtgtctgg
gagaccgttgtccaactggccctaattgactcaccatcacctcaacaaaatgaaaacgag
gtcacaaaggaagaggggaaagtcgctgagagaaaagaaaggaaggaggagtcccaagca
ccacctccagtcatcatgttctcagggtccggtctgaacagctccaagggtctacggagg
cagaagagggactgggtgatcccaccaattaacgtggcagaaaattctcgaggaccgttc
cctcagatgctcgtcagcattcgttcagaccaggacaaggacatctcgatccgatacagc
atcactggggtgggggcagatcaaccacccaatgaggtgttcaatatcgaccccgtgctt
ggaaagatgtttgtcaccaaacctcttgatcgagaacatcgctcttcttaccatctgcga
gcccatgcggtggacatgaatgggaaccaggttgagaaccccatcgatctgtacatcttt
gtcatcgacatgaatgacaacagacctgagttcaaaaaccaggtctacaatggctctgtg
gatgaaggctctaaaccaggaacgtatgtgatgcacgtgtcagcgttcgacggtgacgac
aacaccacagctaatggaatggtgcgctatcgaatcctgtcccagatgccacacaccccc
atcccgaacatgttcaccatcaacagtgaaactggagatattgtgactgtggcacctggt
ctcgatcgagagaaagtgtcccagtatacaatcattgtgcaggccacggacatggagggc
aacctgaactttgggctttccaacacagccactgccataatcactgtcaccgacatcaac
gacaaccctcccatgctgacatccagaactttttccggtgaggtcccagagaaccgagtg
gatcttgtggtggctaatctgacggtgatagatgctgaccagcctcactcgccaaactgg
aacaccatctacaggatcatcagtggagacccatctgggcatttcactatccgcactgac
cctgtcaccaacgatggcatggtcaccgtggtgaagccagtagactttgagatgaatcgt
gccttcatgctgacggtggtggtgtccaaccaggcccacctagccagtggcatccagtcc
tctctcgagtccacagctggggtcaccatatctgtccaggatgtcaacgaacccccttac
ttccccacgaacccaaaacacatccgctttgaggagggcgtccctgctggcaccagcctg
accaccttctcagcctccgatcccgaccgactacagatgcagcagacaatcaggtattca
aagctgaacgatcctgcagactggttgtccatcaacagaaccaatggtcagattgtaacc
actgcaatgctcgaccgggagtctatctatgtcaaaaacaatatatatgaagccacattc
ctggcaacagacaatggctctcctgcagccagtggcacaggcacgctgcagatttatctg
atagatattaatgacaaccctccagcgctcatacccagggagtctcagatctgtgagcgg
gtgaacaagaatgtccacggtgttaacatcactgccgctgatgctgacacagaccccaac
gctggaccctttgtctttgagctgcccaactttcccaccagcatccgacgcaactggaca
atttctcggatcagtggtgattacgcccgtctagggctgcggtaccagatatatttagag
ccgggggtgtatgaggtccctgtaattgtgtcagactctgggaaccctccgttgtccaac
aggtcggtcatcaaagtcaaggtgtgtccctgcgatgaacacggagactgcaccactctc
ggggccgttgcggctgctggcctgggaaccggagccatcatctccatcctcatctgcatc
atcattctgctcagcatggtgctattgtttgtggtgtggatcaagcgcagagagaaggag
agacacaccaagcagctgcttattgaccctgaagacgatgtcagagacaacatcctcaaa
tacgatgaagagggaggaggagaggaggaccaggactacgacctaagccagctgcagcag
cctgactccttggagcacatcattagcaagccgcctggtgtccgcagggtggatgaacgt
cccatcatccctgagtcccagtacccaatcaggcctgtcgtgccccaccctggagacatc
ggggacttcatccacgagggtctgcgagcagcagacaatgaccccacagctcctccatat
gactccctgctggtgtttgactatgagggcagtggctctaccgccggctccgtcagctcc
ctcaactcatccagcacgggggaccaggactatgactacctcaacgactggggcccccgc
ttcaagaagctggccgacatgtacggaggaggggatgatgattaa
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