Sander lucioperca (pikeperch): 116061999
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Entry
116061999 CDS
T07345
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116061999 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116061999 (mbd4)
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116061999 (mbd4)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
116061999 (mbd4)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
116061999 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
116061999
NCBI-ProteinID:
XP_031172270
Ensembl:
ENSSLUG00000023164
UniProt:
A0A8D0ADB7
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All DBs
Position
12:27416043..27419745
Genome browser
AA seq
465 aa
AA seq
DB search
MDTSCDIHQSHKDMDDSCHASTLPLGWIREVRQRKEGKTAGKMDIYITSPQGQKFRSRAS
LHAFLLKDGEGNLDINLFDFTTFKDNVVTTSQLLPSQVKQRRRKKRHADGQQMTTEDATT
PPNKSKRPPSSLRSETKAGKVKSATVKCCIQAAPTTTEDDVKLQKSPQRAGQSLREKVLR
LAPSSNQQNTLIVHKDEEADSQPSVPTLNVEPATESENEGEDERGGDEIQIHSKGDNKSN
SELEAVAESHRDEEGEVLLPDITCGSCTPVRDSQNDDLHCLTAYESSSSKSKSVEDKRKT
SPYFSRKSTRDGLSPPRRKAFKKWTPPRSPYNLVQETLFHDPWKLLVATIFLNKTSGKMA
IPVLWQFFERYPSAEVTREADWKPLSELMKPLGLYELRAKTLTRFSDDYLTKQWRYPIEL
HGIGKYGNDSYRIFCVGEWRDVKPEDHMLNKYHAWLWENHETFGI
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggatactagctgtgatatccaccaaagtcacaaggacatggatgactcatgccacgcc
tccacattgccccttggctggatcagagaggttaggcagcggaaagaagggaagacagca
ggcaaaatggacatctacattacaagtccccaagggcagaagttccgttcaagagcatcc
ctgcatgctttcctcttaaaagatggagaagggaacttagacataaacctctttgatttc
accacattcaaggacaatgttgtcaccacttcacaattactcccctcccaagtaaaacag
aggagaagaaagaaaagacatgcagatggacagcagatgacaacagaagatgcaacaaca
cctccaaataaatctaaaagacccccttcctccctcagaagtgaaactaaagctggaaaa
gtaaagagtgcaactgtaaagtgttgcatacaagctgcacctacaaccactgaggatgat
gtcaaactgcagaagagccctcagagggcgggtcagagtctgagagagaaggtactcaga
ctggctccttccagtaaccaacaaaacactctcattgttcacaaggacgaagaggcagac
tcgcagccttctgtcccgactctgaatgttgagcctgccactgagagtgagaacgagggt
gaggatgaacgaggcggagatgagatacagattcacagcaaaggtgacaacaagtctaat
tctgaactggaggctgtcgctgaaagtcaccgggatgaggaaggcgaggtgttgttacct
gacatcacgtgtgggagctgcacaccagtgagagattcccagaatgatgatctacactgt
ctgacagcttatgaaagtagcagttcaaagtccaagagtgtggaagacaagcgaaaaaca
agcccttatttcagcaggaaatccaccagagatggccttagcccacccagaaggaaggcc
ttcaagaagtggacaccccctcgctcaccttacaacctcgtacaggaaacccttttccac
gacccttggaagctcctggtggccaccatttttctgaataagaccagtggcaagatggcc
ataccagtactgtggcagttctttgaacgttacccgtctgcagaggtgacccgcgaggcc
gactggaagcccctctccgaacttatgaagccactaggcctgtatgagcttagagccaaa
acactcactcgattctcagatgactatctaactaaacagtggcgttaccccattgagttg
catggtattgggaagtacggcaacgactcctataggatcttctgtgtgggcgagtggaga
gatgtgaaacctgaggatcacatgttaaacaaataccacgcctggctgtgggagaaccat
gaaacatttggaatctga
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