Sander lucioperca (pikeperch): 116062027
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Entry
116062027 CDS
T07345
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sluc01001
]
116062027
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116062027
Enzymes [BR:
sluc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
116062027
Protein kinases [BR:
sluc01001
]
Serine/threonine kinases: Other
Other
116062027
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116062027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
ARM_PUB
EIF3I
LisH
WD40
WD40_Gbeta
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
116062027
NCBI-ProteinID:
XP_031172328
Ensembl:
ENSSLUG00000014032
LinkDB
All DBs
Position
12:complement(26604730..26620675)
Genome browser
AA seq
1555 aa
AA seq
DB search
MASASASVDSKAELTTLLEQWEREQQGSTQELVNIITKISELVEKETEEYHKADPDPFDD
RHPGRADPECVLGHLLKILFKNDDFMNTLVNSYVMTSREFSLNAAACRLLQNIMPGLETA
VVFQEKEGIVERLFKWAQEAEQPLRIYATGLLAGAMENQDIAANYREENSVLVPLMLHRL
RELQDKDAENKREIKRPSPRKTLSEPLLPLDEETVDGGFEEKPFTPGRNGAEREGTGPGE
GGEIPFSTLEPENELSFLLNSPHKTSSRANSAVKTMMKPMSAPGSLTDQGMSDGSSYLKR
KAERESGRTLKQKINFSLPDPDRNFSELSNSSWSEMSPWVIGNNYHLYPLTPEIEQRLIL
QYLTPLGEYQELLAVFMQMGARELLMHYMDLKQTNDVQLTFEALKYLASLLLHKKFAAEF
VAHGGVQKLLEIPRPSMAATGVSLCLYYLAYNQDAMERVCMLPHSILSDVVGYTLWLLEC
SHASGCCHATMFFSISFSFRAVLELFDRQDGLRRLVNLISTLEILNPEDQGALLSDDEIF
SSRQTAKHTCMALRRYFEAHLAIKVEQVKQSLQRTEGGAPIHSQPYYKAVSYTREQVVEM
MEFLIEYGPLRLYWEPAEVFHKLSCVQLLLQLISIACDWRTYYGRSDTVRYALDILSILT
VVPKTQLLLSEAVAVLDEGGSTVSTVGISIVLAVAEGEVFVNDAEIQKSALQVVINCVCA
PDKRMSSIGKFIAGTPRRRLPQQTKASESVLTKMWNVVQSNNGIKVLLSLLTVKMPITDA
DQIRALACKALVGLSRSSSVRQIISKLPLFSSGHIQQLMKEPVLQDKRSEHVKFCKFAAE
LIERISGKPLMIGTDVSLAWLQRASVVAQSRISFPEKELLLLIRNHLVAKGLHDTAITLT
KEADLPMACLSHSTHSTSAFPPVAPPPPASPVATLPRTPRLANGVGSRLGNHPSHSSTPG
SSNLQTRPSTSQPTVSSTAFPSTSVPICSNGSPLIGRIIFSRERLAACGTVSCKKPRVLR
QKSDHGAFSQSPAMKKQFDRHLPSPPALDSIITEYLREQHARCKNPVATCPPFSLFTPHQ
CPEPKQRRQAPINFTSRHTRRVIYPKYGGVDGGCFDRHLIFSRFRPISVFREADEDESGF
MCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHSSAITHLEPSRDGSLLLTSASW
SYPLSALWGMKSVFIMKHSFLGDHYVEFSKLSQDRVIGTKEHIARIYDIQTGQVTLTLNN
PDLANNYKRNCATFNPTDDLVLNDGVLWDVRTAQAIHKFDKFNMNISGVFHPNGLEVIVN
TEIWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQADDEDDMMEMQMKSPFGSSFRT
FNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSVNTDTVCRLYEVGRQRLAEEEE
EDEDDQEDDDQEEDDDDDEDSDDDVDTDPLIAELENENGGEDEDDEEEDDGNDEFSPSDE
EVARILEEDVDVGDEDDEDDNDEDDSDNDDVDLDGDNDSSDNSDLEDDIILSLNE
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcatctgccagtgtggactccaaggcagagctgactactctactggaacag
tgggagagggagcaacaaggcagcacacaggagctagttaacatcatcaccaaaatttca
gagcttgttgagaaagagacagaggaataccacaaagcggacccagacccttttgatgac
cgacaccctgggagagctgatccagaatgcgtgttagggcaccttctcaagatcctgttc
aagaatgatgactttatgaacaccctggtgaatagctatgtgatgaccagcagagaattt
tccctcaatgcagcagcttgtcgcctgcttcagaacataatgcctggattggagacagct
gtggtctttcaggaaaaggagggcatagttgaaaggctgtttaagtgggctcaggaggcc
gagcagcccctcagaatatatgccacaggcttgttggccggtgctatggagaaccaggac
attgcagcaaactacagggaggagaactctgttttggtgcctttgatgctgcataggttg
cgtgagcttcaggataaggatgctgagaataaaagggaaatcaaacggcccagccccagg
aagactttgagtgagcctttgctacctttagatgaggagactgttgacggaggctttgaa
gagaagcccttcacaccggggagaaacggcgctgaaagggaagggacagggccaggggag
ggtggtgaaattcccttctcaaccctcgagcctgaaaacgagctttcgttccttctcaac
tcccctcataagaccagcagccgtgccaactcggctgttaaaaccatgatgaagcccatg
tctgccccaggttcactgacagaccaaggcatgtctgatggcagcagttacctaaaaagg
aaggcagagagggagagcggcaggaccttaaaacaaaagataaatttctctttgccagac
ccagacaggaactttagtgagctttccaacagcagctggtctgagatgagcccctgggtg
attggcaacaactatcatctgtaccctctgaccccagaaatcgaacagaggctcatcctg
cagtatctcacacctctgggagagtatcaggagctgctggcagtgttcatgcagatggga
gctcgtgagctgctcatgcattatatggatctaaagcagaccaatgatgtgcagctcacc
tttgaggctctcaagtacctggcttctctgttgctgcacaagaagtttgctgcagagttt
gtggctcatggaggagttcagaagttgctggaaatccccaggccatctatggctgctact
ggagtttctctgtgcctctactaccttgcctataaccaggacgccatggaaagggtgtgc
atgttgccccactccatcctgtcagatgtggttggttacacgctgtggctgctggaatgc
tcacatgcatccggctgctgccacgccaccatgttcttctccatctccttctctttccgt
gccgtcctggagctcttcgacaggcaggacgggctccgacgcctcgtcaatctgattagc
acactggagatcctgaaccctgaggaccagggagcactgctgagtgatgatgagattttc
tccagcaggcagacggccaagcacacctgcatggccctgcgccggtactttgaggcccac
ctggcgatcaaggtagagcaggtgaagcaatccctgcagcgcacagaggggggtgccccc
attcactcccaaccatactataaggcagtcagctatacccgtgaacaggtggtggaaatg
atggagtttctgatagagtatggtccactcagactgtactgggaaccagcagaggtcttt
cacaagctgtcatgtgttcagctcctcctgcagctcatttccattgcctgtgactggaga
acctactatggcaggagcgatacagtgcgttatgctctcgacatcttgagcatcctcaca
gtagtcccaaagacccagctgttgttgtctgaggctgttgctgtgcttgatgagggagga
tccactgtttcgactgttggaattagtatagtcctggcagtggcagagggagaggtcttt
gtaaatgatgccgagattcagaagtcagctctgcaggtcgtcatcaactgcgtctgtgct
ccagacaaacgcatgtccagcattggcaagttcatcgcaggcaccccccgtcgccgcctg
cctcagcagaccaaagccagcgagagtgtgctcactaagatgtggaatgtggtgcagtcc
aacaatggcatcaaggtgctgttgtccctgctgacggtaaagatgcccattacagatgca
gatcagatccgagctctggcctgtaaggctctggtgggtctgtctcgctccagctccgtc
agacagattatcagcaagctgcctttgttcagcagcggacacatccagcagctcatgaag
gagcctgtgcttcaggacaaacgcagcgaacatgtcaagttctgtaagtttgcagctgag
ctgatagaaaggatctctgggaaaccgttgatgatcggtacggacgtgtctttggcgtgg
ctacaaagggccagtgtggtagctcagtccaggatctcctttcctgagaaagagctactg
ctgcttatcaggaaccatcttgtggccaaaggccttcatgacaccgccatcacactcacc
aaggaggcagatctcccgatggcatgtctgtctcattctacacattcaacttctgctttc
cctcctgtcgctcctcccccacctgcctcccctgttgctactctaccccgcaccccacgg
ctggccaatggtgttgggtcaagactcggaaaccatccctctcattcatccaccccagga
tctagcaatttacaaacacgtccctctacatcacaacccactgtgtcttctactgctttc
ccctcaacgtctgtcccaatctgtagcaatggctcaccactaattggacgaatcattttc
tctcgtgaacggctagcggcgtgtggtacggtgagttgcaagaaacctcgggtgctgagg
cagaagtctgaccatggggcctttagccagagtccagccatgaagaagcagtttgacagg
caccttccctccccccctgcattagacagcatcatcacagagtacctgagggaacagcat
gcacgctgtaagaaccctgtggcaacatgcccgcctttctctctcttcaccccccatcaa
tgccctgagcccaaacagagacgccaagcacccatcaacttcacatcccgacacacacgg
agggttatatatcctaaatatggaggagtggatggaggctgctttgacagacatctcatc
ttcagcaggttccgtcccatctccgtgttcagggaggcagacgaggatgagagtgggttc
atgtgttgtgccttctcagctcgcgagcggttcctgatgctcgggacgtgcacagggcag
ctcaaactctacaatgtgtttacaggccaggaggaagccagctacagctgtcacagttca
gccatcactcacctggagccctcacgggatggctctttgctcttaacgtcagcctcttgg
agttaccctctgtctgcactgtggggcatgaagtcagtcttcatcatgaagcattctttt
ctgggtgaccattatgtggaattcagtaagctttcacaagatcgtgtcattgggactaag
gaacatatagcaaggatttatgacatccagacaggtcaggtaactctgactctaaacaac
ccagacctggctaataactacaagaggaactgtgccaccttcaacccaacagatgacctg
gtgctgaatgacggcgtgctgtgggatgtgcgcacggctcaagccatccacaagtttgac
aagttcaatatgaacatcagcggtgtgttccatcccaacggcctggaggtcattgtaaac
acagaaatttgggatctgcgtaccttccacctcctccacaccgttcccgctctggaccag
tgcagaatagtcttcaacaacaacggcactgtcatctatggagcaatgttgcaggctgac
gatgaagacgacatgatggagatgcagatgaaaagtccatttggttcatcgttcaggacc
tttaatgccacggactacaaaccaatcgccactattgatgtcaagaggaatatatttgac
ctttgcactgataccaaagactgctacctagctgtgattgagaaccaagactctgtaaac
actgacacagtgtgcagactatatgaagttggccggcagagacttgcagaggaagaggag
gaggatgaggatgatcaggaggatgacgatcaggaggaagatgatgacgatgatgaagat
tcagacgacgacgtcgatacagatccccttatcgctgagctagagaatgagaacggcgga
gaggatgaggacgacgaagaggaggatgatggaaatgatgaattctctccctctgatgaa
gaggtggcacgcattctcgaagaggatgttgacgttggggacgaggatgacgaggatgac
aatgacgaggatgactctgataatgacgacgtcgatctggatggcgacaatgacagctcc
gacaactctgacctggaggatgacatcatcttatccctgaatgagtga
DBGET
integrated database retrieval system
