Sander lucioperca (pikeperch): 116062081
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Entry
116062081 CDS
T07345
Symbol
sin3aa
Name
(RefSeq) SIN3 transcription regulator family member Aa isoform X2
KO
K11644
paired amphipathic helix protein Sin3a
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116062081 (sin3aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116062081 (sin3aa)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
116062081 (sin3aa)
REST complex
116062081 (sin3aa)
Heterochromatin formation proteins
Other heterochromatin formation proteins
116062081 (sin3aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
116062081
NCBI-ProteinID:
XP_031172450
Ensembl:
ENSSLUG00000019802
LinkDB
All DBs
Position
7:17955293..17977134
Genome browser
AA seq
1272 aa
AA seq
DB search
MKRRLEDQETVFASQQRRLAGNAEAFQHRVLAPAPAPAVYEAVSDNMQPTAGVQYSVPQG
YQVPTVAQNSGGHGHTPSPAVHGGSHHHSPAVQSHGPSVMSGHSHTAPPQASAQGQQFQR
LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDLVNVTTPGQIHHITPHGISVQNIPITVAATQHPPQLPSAATT
TAPPLLTQPTPAKMSKPLQPQALTPSSQSNPSIPAYTSPRSPPMQLHPPLSGTPTGPPMQ
NNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQE
VYAQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKAESVRNDHGGTAKKLQLNNKQ
RPNQNGCQIRRHPTPGTTPPVKKKPKLLNLKDPSVAEASKHGVGTESLFFEKVRKALRSA
EAYDNFLRCLVIFNQEVISRAELVQLVLPFLGKFPELFNWFKNFLGYREMSHIETYPKER
ATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTF
VSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLETVQRKLSRMSAEEQAKFRLDSTL
GGSSEVVHRKAIQRIYGDKAPDIIDGLKKNPAVSVPIVLKRLKTKEEEWREAQRGFNKIW
REQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDEHQEQASEENTTPPTGPHL
ALAYEDSQILEDAAALIIHHVKRQTSIQKEDKYKIKQIIYHFIPDMLFSQRGELSDVEEE
EEEEEMDLEEGASKKHNGVPGSGSPSKSKLLFSNTAAQKLRGSDDAYNLYYVNNNWYIFL
RLHQTLCSRLLRLYGQAERQIEEEVRERDWEREVLGLKKEKSDNPAIQLRLKEPMDIEVE
DYYSAFLEMVRNLLDGNMEASQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEI
CVQVTDLYLSESANGASGGTMSTQSSRSSAEALYQRKAEQLMSDENCFKVMFSRHRGQVQ
LTVELLDTEEENSDEPMEAERWSDYVGRYLNPDSTTPELREHLAQKPVFLPRNLRRIRKY
QKGREQLDKEACEGGKKSLEKEKMECMFKLNSYKMVYVFKSEDYMYRRTALLRAHQSHER
VSIRLHKRFQAWVDVWAKEHVSHDMNAETNKWLMGDAREGLLPCTTSRNPEILHFVNINK
YRVKYGPPSKAP
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgactggaggatcaggaaacggtttttgcgtcccagcagcggcgcctcgct
ggcaacgcggaggctttccagcatcgcgtcctggcccctgccccagccccagctgtgtat
gaggccgtgtcagacaacatgcagcccacagcaggcgtccagtactccgtcccccaggga
taccaggttcccaccgtggcccaaaacagtggcgggcatgggcacactccaagcccagcc
gtccatggtgggtcccaccaccatagcccagcagtccagtcccacgggccctcagtgatg
tcagggcacagccatacagcgcctcctcaagcctctgcacagggccagcagttccagagg
ctcaaggtggaagatgctctgtcctacttggatcaagtgaaactgcagtttggcaaccag
cctcaggtctacaatgactttctggacataatgaaagagttcaagtctcaaagtattgac
acccctggagtcatcagcagagtgtcacagcttttcaaaggccaccccgacctcatcatg
ggcttcaacaccttcctgccacctggctacaagatcgaggtccagaccaacgacctagtc
aacgtgaccacgcctggtcagatccaccacatcaccccgcatggcatctcagtccagaac
atccccataacagtagcagctacccagcatccgccccagctcccgtctgctgcaaccacc
accgctccgccccttctgacgcagcccacccccgccaagatgagcaagcctcttcagccc
caggcgttgacaccgagcagtcagagcaatccgtccatccctgcgtacacctctcctcgc
tccccgcccatgcagctccacccgccactcagcgggacccccactgggccacccatgcag
aacaaccagcctgtggagttcaaccacgccatcaactacgtcaacaagatcaagaaccgc
ttccagggccagcctgacatctacaaagccttcctggagatcctccacacataccagaag
gagcagcgtaacgctaaggaggctggtgggaactacacaccggctctgacggagcaggag
gtgtacgctcaagtggccagactcttcaagaaccaagaagacctgctctcagagtttggg
caatttctccctgatgccaacagttcagtgctgttaagtaagaccacagctgagaaggca
gagtctgtacggaacgaccacggtggtactgccaaaaagctgcagctcaacaacaaacag
aggcccaatcagaacggctgccagatccgtcgtcatccaactcccgggaccacaccccct
gtcaagaagaagcccaagttactgaatttgaaagatccctcggtggcagaggccagcaag
catggagtcggaacagaatctctgttctttgagaaggtgcgcaaagccttgcgaagtgca
gaggcctacgacaacttcttgcggtgtctggtcatctttaatcaggaggtgatctccagg
gctgaactagtgcagctggtgttgccctttttaggaaaattcccagaactcttcaactgg
ttcaaaaacttcctgggatatcgggaaatgtcccacatcgaaacataccctaaggaacgg
gccaccgaaggcatcgccatggagattgattatgcctcctgtaagagactaggctccagt
tacagagctctgcccaaaagctaccaacagcccaagtgcaccggcagaactccactttgt
aaagaggtcttaaatgacacctgggtctccttcccctcctggtctgaggactccacgttt
gtcagctccaagaagacccagtacgaggagcacatctacagatgtgaggacgaacgcttt
gagttggatgtagtcctggagaccaacctggcgaccatcagagtcctggagacggtacag
cggaagttgtcccgcatgtctgcggaggagcaggccaagttccgcttggacagcacactg
ggcggctcttcggaggtcgtacaccgtaaggccatccagaggatatacggagacaaggcg
cccgacatcatcgatggcctaaagaaaaaccctgccgtttctgtccccatcgtgttaaaa
agattaaagaccaaggaggaagagtggcgggaagcccaacgaggcttcaacaagatctgg
agggagcagaacgagaagtattacctcaagtctctggaccatcaaggcatcaacttcaaa
cagaatgacaccaaagtgcttcgatccaagtccctgctaaatgaaatcgaaagcatttac
gatgagcaccaggagcaggcgtctgaggagaacaccactccgcccacgggtcctcatctg
gcgctggcgtacgaggacagccagatcctggaggatgcagcggcgctcatcatccaccat
gtcaagcggcagaccagcattcagaaggaggacaaatacaagatcaaacagatcatctac
cacttcatccccgacatgctgttctcgcagcggggcgagctctccgacgtggaggaggag
gaggaggaagaggagatggacctggaggaaggcgcctccaaaaagcacaacggcgttccc
ggcagcgggagcccctccaagtcaaagctgctgttcagcaacacggcggcgcagaagctg
cgcggctctgacgacgcctacaacctctactacgtcaacaacaactggtacatcttcctg
cggctgcaccagacgctgtgctcgcgtctgctgcggctctacgggcaggcggagcgacag
atcgaagaagaggtccgagaacgagactgggagagggaagtcctgggactgaagaaggag
aagagcgacaatccagccatccagctgagactgaaggagcccatggacattgaggtggaa
gattactactcagccttcttggagatggttaggaatttgcttgatggaaatatggaggct
tcccagtacgaggactcgctgagggaaatgttcactattcacgcctacattgccttcacg
atggacaagctcatccaaagcatcgtccggcagctccagcacatcgtgagtgatgagatc
tgtgtccaagtaacggacctctacctctcagagagcgctaacggcgccagcggaggaacc
atgtccacccagtcttcgaggagctctgcggaggccttgtatcagcggaaagccgagcag
ctcatgtctgatgagaactgcttcaaggtgatgttttcaagacacagagggcaggtgcag
ctcacggtggagctgctcgacacagaggaggagaactcagacgagcccatggaggctgag
cgttggtctgattatgttggacgctacttaaacccagattccaccacacctgagttgagg
gagcacctcgctcagaagccagtttttcttcccaggaatctgaggcggatcaggaagtac
cagaagggccgagagcagttggacaaagaggcctgcgagggtggcaagaaatccctggaa
aaggagaaaatggagtgcatgttcaaactaaactcttacaagatggtgtacgtctttaag
tctgaggactacatgtacagacgcactgccctgctgcgagctcaccagtcacacgagagg
gtgagcatacggctgcacaaacgcttccaagcctgggtggacgtgtgggccaaggagcac
gtctctcacgacatgaacgccgagaccaataagtggctgatgggcgacgcgcgtgaaggc
ctattaccctgcaccaccagccgcaatccagaaatccttcactttgtgaacatcaacaag
taccgcgtcaaatacggcccacccagcaaggcgccgtag
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