KEGG   Sander lucioperca (pikeperch): 116062121
Entry
116062121         CDS       T07345                                 
Symbol
zgc:158828
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
  KO
K13117  ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
Organism
sluc  Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sluc03041]
    116062121 (zgc:158828)
Enzymes [BR:sluc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     116062121 (zgc:158828)
Spliceosome [BR:sluc03041]
 Complex C
  Other components
   Complex C specific factors
    116062121 (zgc:158828)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C DEAD HA2_N ABC_tran AAA_22 Cas3-like_C_2 AAA_19 nSTAND3 AAA_30 AAA_23
Other DBs
NCBI-GeneID: 116062121
NCBI-ProteinID: XP_031172538
Ensembl: ENSSLUG00000004014
LinkDB
Position
12:25239099..25247652
AA seq 716 aa
MTSSTRKEKKICDVETKMAAPLSTMKFWKPGSEAPGISEERELNTETTGSPIIFNPHTAL
SIEKQRQKLPVFKHRNNILYLVESFQTVIIVGETGCGKTTQLPQYLLEAGWATEGKVIGV
TQPRRVAAISVANRVAEERGALVGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMADP
LLKKYSVLMLDEAHERTMYTDIAIGLLKKIQKKRQDLRLIVASATLDAKKFHDFFNLNES
GDPNKDTCGILTVEGRTFPVDVFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQE
EVEKVVSLLQDQARSLSRYGMKKHLRILPMYSGLPYAEQMKVFERTPNSVRKVVVATNIA
ETSITINGVVFVIDCAFVKLRAYNPRTAIESLVVTPISKASASQRAGRAGRNRPGKCFRL
YTEEDFEKLPASTVPEMQRTNLAPVILQLKALGIDNVLRFSFLSPPPAQTMVQALELLYA
LGGLDHYGRLTDPMGVRMAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVVPS
NQKKAAAREHRKFAVAEGDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLLRAVTVREQL
RRLMNKFKVPRTSSEGDPDVILKCIVYGFFANAARIHHSGSYRTLRDDRELHIHPNSVLF
GEKPPKWVVFNEVVQTAKYYMRDVTAVESSWLVELAPHFYKQAKHGSLASKRSRVL
NT seq 2151 nt   +upstreamnt  +downstreamnt
atgacgtcgtctacgcggaaagaaaaaaaaatatgtgacgtagaaaccaagatggcggct
cccctttccacgatgaaattttggaagccggggtctgaggctccgggaatctcagaggag
cgggagctcaacacagagacaaccggctcccccatcatcttcaacccgcacacagccctc
tccatagagaaacaacgacagaaactccctgttttcaagcacagaaacaatatcttgtac
ttggtggagagcttccagactgtcatcatagttggtgagacaggatgtgggaaaacaacg
cagttacctcagtacctgctggaggctggctgggcgacggaggggaaggtgattggagtg
acacagcctcgccgtgtggctgccatctctgtagctaaccgtgtagcagaggagcggggg
gccctggtgggacatgaggtgggctacaccatccgatttgatgactgctctgatccccac
gccacaaggatcaagttccttacagatggcatgctggtgcgggagatgatggctgatcct
cttttgaaaaaatacagtgtgttgatgctggacgaagcacatgagagaaccatgtataca
gacatagccattggtctactaaagaagattcagaaaaagcggcaagacctgaggctgatt
gtggcctctgccactctggatgccaagaaattccacgacttcttcaacctgaacgagtcc
ggagatcctaacaaggacacgtgtggaattctgacagtggagggacgtacctttccagtg
gatgtcttctacactgtcagtcctgtcccagactatgtgaaggctacagtggagacagtg
ctgaagatccatgagacggaggatgacggagacgtcctggcttttcttactgggcaggaa
gaggtggagaaagtggtgtcccttctgcaggaccaggccaggtctctgtcacgatacggc
atgaagaaacacctgagaattttgcccatgtactctggtctaccttacgctgagcagatg
aaggtctttgagaggacgcccaactctgttcgcaaggttgtggtggccacgaacatagct
gagacctccatcaccataaatggagttgtatttgtcattgactgtgcatttgtgaagctg
cgagcctataaccctcgcactgccattgaatcactggtggttactcccatctccaaggct
tcagccagccagagggctgggagagccggacgaaaccgacctgggaaatgctttagacta
tacacagaggaggactttgagaaactgcctgcctctactgtgccggagatgcagcgcacc
aatttggcccctgtcattctgcagctcaaagcattaggcattgacaacgtgctgcggttc
agcttcctttctcctcctccagctcagaccatggttcaagctctagagctgctctacgct
ctgggaggtctggaccattacggacgtttgactgatcccatgggtgtgcggatggcagag
tttcctctcagtcccatgtttgccaagatgctcctcgagtcaggaaactttggctgctcc
aaagagattgttaccattgcagcaatgatgcagattcagaatatatttgttgtgccgtcc
aatcagaagaaagctgctgcccgagagcacaggaagtttgcagttgctgagggagaccat
ctcaccatgctgaatgtgtacgaagcattcattaagcaccagaaaagctcccagtggtgt
caggaacacttcctcaattataagggtctgctgcgggctgtgactgtacgagagcagctc
cggcgtctcatgaacaagtttaaggtgccacggacttcaagtgaaggtgaccctgatgtg
atcttgaagtgcattgtatatgggtttttcgctaatgcagcccgcatccaccattctggt
tcctaccggactttacgagacgatcgcgagcttcacatccaccccaactctgtgctgttt
ggagagaaacctccaaaatgggttgttttcaatgaagtggtgcagacggcaaaatactac
atgcgcgatgtgaccgctgtggagtcgtcctggttggtcgagttggcccctcacttttac
aagcaggccaagcatggttcactggctagcaagaggtcccgggtcctctga

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