Sander lucioperca (pikeperch): 116062210
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Entry
116062210 CDS
T07345
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116062210
Spliceosome [BR:
sluc03041
]
Common components
Common spliceosomal components
General mRNP proteins
116062210
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
116062210
NCBI-ProteinID:
XP_031172697
Ensembl:
ENSSLUG00000020976
LinkDB
All DBs
Position
12:complement(26780484..26788667)
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AA seq
536 aa
AA seq
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MADDFDVEAMLEAPFRKTSLMISHLYSHEFIFDSTVNCEKKDEIKSSHANGHDDQNKKKK
RSRSKSRSPGSRRRRSRSKDKKKGKKRSKSRERKRSRSRERHRSNSRSKERSGRYRARKS
PVRKRSKSRSPLKKEKSPIRNFEDAIGPYNKIREQPIDNLTPEERDARTVFCMQLAARIR
ARDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVESSSVPLAIGLTGQRLLGVPIIV
QASQAEKNRAAAAANNLQKGSSGPMRLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDS
ETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKVGHVTERSDSSTASSFLDNDELE
RTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQMTGSIPFGNISAPTSVPTPAPSQAL
NLPSQPLATHCLQLSNLFNPQSENDPSWAVEIQDDVIEECNKHGGIVHIYVDKNSAQGNV
YVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTYHNLFPDSVTAKQLLMPARR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgacgttgaggccatgctggaggctccattcagaaagacttcccta
atgatatctcacctctactcccatgaattcatctttgattccactgtgaactgtgaaaaa
aaggatgagatcaagtcctctcatgcaaatggacatgacgaccagaacaaaaagaaaaag
aggagccgaagcaagagccgaagcccaggctctaggaggagaagaagcagaagcaaagac
aaaaagaagggtaagaagaggagcaagagcagagaaagaaaacgaagccgcagcagagag
cgccatcgcagcaactcccgaagcaaggagcgctctggccggtacagagcacgcaagagc
ccagtgcggaaacgttccaaaagtcggagccccttgaaaaaagagaagagtcccatcaga
aattttgaggatgctatcgggccgtataacaaaatcagggagcaaccaattgacaattta
acaccagaggagagggatgcccgcacagttttctgtatgcagctcgctgcaagaatcaga
gctcgagacctggaagatttcttctcagctgttggaaaagtaagagatgtgagaatgatc
tcagacagaaactccaggagatcaaagggcatcgcttacatagagtttgtggagtcttct
tctgtaccactagctattggattgactggccagaggcttttaggagtgcccatcatcgtc
caggcctctcaggcagaaaaaaatagagctgcagctgctgccaacaatctacagaagggc
agttcaggtccaatgaggctgtacgtgggctccctgcacttcaacattactgaagaaatg
cttcgagggatctttgagccttttggaaagattgagggaatccagctaatgatggacagt
gagactggacgatccaaaggatatggcttcatatcttttgcagatgcagaatgtgcaaaa
aaggccttggagcagctcaatggctttgagctggccggacgtccgatgaaggtggggcat
gttacagagcgctcggactcatcgacagccagctcattcctggacaacgacgaacttgag
aggactggtatcgacctgggaaccacagggcgtctacagcttatggctcgactagcagaa
ggaactggtctgaaaatccctcctgctgctcagcaggctctacagatgactgggtccata
ccctttggaaacatttctgctccaacatctgttccaactccagcgccaagccaagccttg
aacctcccttcacagccgttggccacacactgccttcagctgtccaatctgttcaaccca
caatcggaaaacgatcccagctgggctgtcgagatccaagatgatgttattgaagagtgc
aacaaacatggaggaattgttcacatttatgttgataagaactctgctcaaggtaatgtg
tatgtgaagtgtccctcaataccagcagcgatggcaactgtaaatgcacttcatggacgc
tggtttgcaggcaaaatgataacggctgcctacgttcccttaccaacctaccacaacctt
ttccctgattctgtaacggcgaagcagctcctaatgccggcacgccgatag
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