Sander lucioperca (pikeperch): 116062281
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Entry
116062281 CDS
T07345
Symbol
lama1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04510
Focal adhesion
sluc04512
ECM-receptor interaction
sluc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116062281 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116062281 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116062281 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_II
Laminin_G_3
Laminin_I
REV
Motif
Other DBs
NCBI-GeneID:
116062281
NCBI-ProteinID:
XP_031172794
LinkDB
All DBs
Position
23:complement(4473083..4546636)
Genome browser
AA seq
3081 aa
AA seq
DB search
MMKMKMMKFVVLLLLMERAAAQQRGLFPAILNLASNAVISSNATCGDPEPEVYCKLVEHV
PGRRIKNPHCPKCDANSLLAKERHPITNAIDGTNQWWQSPSIKNGRQFHWITITLDLKQI
FQVAYVIIKAANSPRPGNWILERSLDGVTFDPWQFYAISGAECLSHYNVTPRLGPPTYKR
DTEVICTSYYSRLNPLEHGEIHTSLINGRPGADDLTNELLNFTSARYIRLRLQRIRTLNA
DLMTLSTRDPREIDPIVTRRYYYSIKDISVGGMCICYGHAQSCPLDAVTKKMQCVCEHNT
CGESCNECCPGYHQQPWQPGTLSEGNTCEKCNCHNKASDCVYNQTVSDWSLSLDADGVRR
GGGVCSSCQQNTAGINCENCKDGYYRPSEVSPYSDSPCVECECDLRGSESSVCSRDDTQP
GVSAGQCVCKEGFSGLRCDRCAFGFRDFPLCSRCECNLSGSVNTDPCSACTCKVNVMGAH
CDLCQPGFYNLQAGNPLGCSDCFCFGVSDVCESSEWNTAQVHHTDAWLRPSLALQSLPVV
HGNDLPIPNNSSGHAHQHVLSWAAPDRFLGNKLGSYGGVLTFSLSYDVPLDNEDHSLRAH
SDIIIQGNGRSLRLAPPLLLFLSELAERSVAVAIVPQRFLDDETGVHVTHDALLSALSDV
TSLRVRVHLNASADGPIRLSSVSLDVADPASVSGVQAVAVETCECPWGYSGTSCEACLPG
FYRLGGVLFGGNCLQCECNDHADHCDTNGVCLGCSHNTIGPHCDQCLPGFYGDATEGTAA
DCRVCPCPLTETSNSFSPTCVLEESGQVLCDRCQDGYTGPRCERCASGFHGNPQVLGGAC
ELCECNGNVDVSEAGHCHTVTGECLRCLGNTAGPHCEVCQPGYYGDAVHAKDCQACGCDV
SGALSSVCDVTTGQCSCRENVTGRACDRCQFGFFGLQSGRGCRPCSCSQSGSLSESCDKE
GRCQCVEGVAGDACDRCSHGYFGFPAIGCTACTCEHTRGNCDPESGECICPAHTEGVSCD
RCEDGYWGHDPVTGCKPCSCSAAGSSAPQCELTNGQCLCREGFSGRSCDQCARGYHGYPE
CSACGCDVTGTDEKFCNTTLGVCDCRDNGECVCKVGVSGRRCEECVSGWFGLSAESPAGC
SQCFCSGLSTDCEEQGGLHRVPVTLDGSAAALSLVSQSNLQGVVSGVYQQDGDTLLDTRQ
INSSRLAGPLYWRLPPHFQGPQLLAYGGLLSYIITFYAEDGSGLSNQEPQILMRGGAMRK
LVIYMDMVAPGNGVKTQHDIRMTEHKWKYFNSVSEKPVSHADFMSVLSDVEYIIIKASYG
TLLQQSRISNITMETAVEAGLDEDGGVARLIESCICPPGYTGLSCQECAEGFFRQPVSEL
SSQSQKSLFVRLCVRCRCNDHSERCDPETGACQGCEHHTSGRSCELCAPGYYGKVNGSIS
DCSLCACPLQDNSFSPNCVSDGAFGDFVCSACQMGYEGRYCERCSVGYYGNPSVAGGKCR
RCGCSDWGSLVPLCDALTGRCECKAGVKGHTCDRCEERHVLQEEECVSCDDECTGVLLDD
LEQIHNDFLSVNLSAVAMAPYRQLVLLENATRDIQAAFPENGSVALRLSGLEDELSHVTS
DLSALLQQVSHLSNDLEKVGVSTNQSLSQGALLLQGISSLQENIQELQREAGLLNQSAAE
QLDSANQKALLEEVTAMLETFRAVNMSAAGAAANQELRLSGSLLRSLHEDFLSSRAPVED
RLRPLSAHLSVVMETLQHADTQLSNNAQRNTQTHTLLDATHTQLQHYQCACQNLSVDFLL
LDGEMEESQLLLADTVDLTEEITNSTSMVDQLSEQLARWRPLLRNQVDSLVVGLKMSDAL
EKVYSAESHAHLLQSHAHSVHSSLSSVCNVSQNGSRLVQLDSDITERVDSAQQVAAIAQA
AASLALNTSVQSELPLSEEGGARLKASAAVLKESQRINETAEELQLNVSMVTSRLGLVRD
SVRNSSLLLRQPIRELHSLSNGSSALLQVTVTASDLQAALQRLHRLTLQLQNSSSVVVNT
NNTVRETNKLVTHTHSAANEAQRKLEEAEHRTERLMERIKPLSMLGETLSRNLSDIRELI
DQARRQAASIKVAVQADRDCVRSYRPQILSSNFNTLSLVVKTTSPENLLFFLGSNTTVDF
LAVEMHAGKVSLVWDVGSGSSRLDFPGVDISNNQWTRINATRFGAHVSLSVHQLEAEAAP
LPAVTATSPGPARVLDIDRNSVIHVGGLGAETRREAALRADSFQGCLGEASLNEKNIGLW
NYVRRDGACGGCFSSPQAEETSFHFDGSGFSLVQKSLRATSTSIVLLFKTLSPGGLLLYL
ASNNTRDFLSMELVEGRVHLTFDLGSGALTLTSSRKYNTGVWYKITLQRSKRKGYLSIMA
ADQSSEKEVLEAESPGSASDLNRSDLDPIYIGGLPASRPIRRQVVSRSYVGCIKNVEIAR
SNFDLLRDAYGVRKGCVLEAVRSVSLLAGGFVEIAAPSFGQEAELLFSFSSLNQSGVLLA
AFSEERTQRKHFLSVQLFLGALEAELGEVGGASRRVTVVKPDGGSFSDGTTHSVIINVNR
KSLSLQVDEEQRKSVSLLPGGLSRLSPASFFIGGLPSGEESRLPIRLQEVYRSFRGCIQH
LVLSGALVDLSGAVKYEGAELDSCLLEERAGGVVLPEDQDVEPTADPAPPPGAPPTQQGA
LPPGALTCALEVEPSFLPTAVQFGSSKHSHMTFIITPDAIRKSVSLRLSVRSRALDGLLL
LLSDSKQMDFVVLRLSAGRLMMSADLGRGAASITSSVIVNDGEWHAVSGEVSRRSLSVSV
DGSSPDSASLRGNQLDVDSRLYLGGLPHTHSTRRINASSSLPGCVRSVSLNGAMLDLSKP
ASQHDVTSCFTTDQKGSYFNGSGYATLMRDGYKVGSDVSVSLEFRTSQSDGVFLGISSAK
VDAIGLEMINGQVVFNVNNGAGRVSVRSIGPLLCDGRWHRLLARKSKHSLSLSVNGRSYS
TPNPYPQSTSAETNNPVYLGGFPVGVRQNCLSTISRFRGCLRNVQLVKSHLSDALDLGSA
HFLSGVTPNSCPVARQRPAGL
NT seq
9246 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagatgaagatgatgaagtttgtggtgttgttgctgctgatggagcgagctgca
gctcagcagagagggctgttcccagccatcctgaacctggccagtaacgcggtgattagc
agtaacgctacgtgtggagacccagagccagaggtctactgtaagctggtggagcacgtc
ccaggaagacgcatcaagaaccctcactgccccaaatgtgatgctaactccctgctggct
aaagaacgtcatccaataacaaacgccatcgacgggaccaatcagtggtggcagagtccc
agcatcaagaacggacgccagtttcactggatcacgataacactggacctcaaacagatc
tttcaggtcgcttacgtcatcatcaaggcagctaactcacctcgaccaggtaactggatc
ctggagcggtctctggacggcgtgacctttgacccctggcagttctacgccatcagcggc
gccgagtgcctgtctcactacaacgtgacgccgagactcggaccgccgacctacaagaga
gacacggaggtcatctgcacgtcgtactactcccgcctcaacccactggagcacggggag
atccacacgtccctgattaacggccgccccggcgctgatgatctgaccaatgagctgctg
aacttcacgtcggctcgttacatcagactccggctgcagcgaatcagaacgctcaacgcc
gacctgatgacgctgagcacccgcgacccccgagagatagaccccatcgtcaccaggagg
tactattactccatcaaagacatctctgtgggcggcatgtgcatctgttatggccacgcc
cagagctgcccgctggacgccgttaccaagaaaatgcagtgtgtgtgtgaacacaacacc
tgtggagagagctgtaacgagtgttgccccggttaccaccagcagccatggcaaccaggg
accctctcagagggaaacacctgtgagaagtgtaactgtcacaacaaggcgtctgactgt
gtgtataaccagaccgtctctgattggtcactgagtctcgacgctgacggcgtgcgtcgg
gggggcggagtctgttccagctgtcagcaaaacacggccgggatcaactgtgagaactgc
aaggacgggtactacaggccctcagaggtgtctccatactctgactctccgtgtgtggag
tgtgagtgtgatctgagaggatcagagtcttcagtctgcagcagagacgacacacagcca
ggagtgtcagcaggccagtgtgtgtgtaaagaaggcttctcaggtctccgctgtgaccgc
tgtgcgtttggcttcagagatttcccgctctgttctcgctgtgagtgcaacctgtcgggc
agcgtcaacaccgacccctgcagcgcctgcacctgcaaggtgaacgtgatgggagctcac
tgtgatctgtgtcagccgggcttctacaacctgcaggccggaaaccctctcggctgctcc
gactgcttctgcttcggagtctctgacgtctgtgagagttcagagtggaacacagcacag
gtgcatcatacagacgcttggctccgcccctctctggccctccaatcactgcctgttgtc
cacggcaacgacctccccatccccaacaactcctctggccacgcccaccaacacgtgctg
tcgtgggcggcgcctgaccgtttcctcggcaacaagctggggtcttatggaggggtcctg
accttctctctgagttatgacgtcccattggataatgaagaccactctctccgcgcccac
tctgacatcatcatccagggaaacggacgatccctccgtctcgccccccctctcctcctc
ttcctctccgagctggccgagcgatcggttgccgtggcgatcgtcccgcagcgtttcctg
gacgatgagacgggtgtccacgttacccacgatgcactgctgtcggcgctcagcgacgtg
acatcactgagggtcagagttcatctcaacgcctccgccgacgggcccatacgtctcagc
tctgtgtctctggacgttgccgacccagcttcagtttctggcgtccaggcggttgccgtg
gagacgtgtgaatgtccgtggggttacagcggcacttcctgtgaggcgtgtcttccaggc
ttctaccggctggggggggtcctgtttggggggaactgtctgcagtgtgagtgtaacgac
cacgcagatcactgtgacaccaacggagtctgtttgggatgttcccacaacaccattggt
cctcactgtgaccagtgtcttcctggtttctacggcgacgccaccgaggggactgcggcc
gactgtcgggtgtgtccgtgtcctctgacggagacgtccaacagcttcagtcctacctgt
gtgttggaggagtctggtcaggtgttgtgtgacagatgtcaggacggttacaccggacct
cgctgtgagaggtgtgccagtggtttccatggtaacccccaggtgctgggcggggcctgt
gagctgtgtgagtgtaacgggaatgtggacgtcagcgaggcggggcactgccacaccgtc
accggggagtgtctgcgttgcctcggcaacacggccggaccacactgcgaggtctgtcag
ccgggttactatggagacgctgtgcacgccaaggactgtcaggcgtgcggctgtgatgtc
agcggcgccctgtccagtgtgtgtgatgtcacgacgggtcagtgttcatgcagagaaaac
gtgacgggacgagcctgtgaccgctgccagtttgggtttttcgggctgcagagcggccgg
ggatgtcggccctgtagctgcagccaatcaggatctctctctgagtcatgtgacaaggag
gggcggtgccagtgtgtggagggcgtggccggagacgcgtgtgaccgctgtagccatggt
tacttcggtttccccgccatcggctgcacagcatgcacctgtgaacacaccagagggaac
tgtgacccggagagcggcgagtgcatctgccccgcccatacggagggagtctcctgcgac
aggtgtgaggacggttactggggtcacgaccccgtcacaggctgcaagccgtgcagctgc
agcgcagcgggaagctccgcccctcagtgtgagttgaccaatggtcagtgtctctgcaga
gagggcttctctggcaggtcatgtgaccagtgcgcccgcggttaccacggttacccagaa
tgctcggcgtgcggctgcgacgtgacgggaacggacgagaagttctgcaacacgacgctg
ggagtgtgtgactgtcgagacaacggggagtgtgtgtgcaaggtgggcgtgtctgggcgg
cgctgtgaggagtgcgtctctggttggttcggcctatcagcagagagtcctgccggctgc
tctcagtgtttctgttcaggactcagcacggactgtgaggagcagggaggactgcacaga
gtacctgtgaccctggatggctctgctgctgccctgtcattggtcagccagtctaacctg
cagggcgtagtgtctggagtctaccagcaggacggggacacgctgctggacacccggcag
atcaacagcagccggctggccggcccgctctactggaggctccccccccacttccaaggc
ccgcagctgctggcgtacggcggcctgctgtcttacatcatcactttctacgctgaggat
ggctcggggctgtccaatcaggagcctcagatcctgatgaggggaggggccatgaggaag
ctggtcatatacatggacatggtcgcccctggcaacggcgtcaagactcagcatgacatt
aggatgacagagcacaagtggaagtattttaactcagtgtctgagaagccggtgagtcac
gctgacttcatgtccgttctcagtgacgtggagtacatcatcattaaggcttcttatggg
actctactgcagcagagcaggatctctaacatcaccatggagacagcagtggaggcgggg
ctagatgaggatggaggcgtggccagactgattgagtcctgcatctgtccgccgggatac
acgggactgtcctgtcaggagtgtgctgaaggattcttccggcagcctgtgtctgagttg
tcgtctcagagtcagaagtctctgtttgttcgtctgtgtgttcgatgccgctgcaatgac
cacagcgagcgctgcgacccggagactggagcctgtcagggctgtgagcaccacaccagc
gggcggagctgcgagctctgtgccccggggtattatgggaaagtcaacggctccatcagc
gactgctcgctgtgtgcctgccccctgcaggacaacagtttcagtcccaactgtgtgtca
gacggagcgtttggggatttcgtctgctcagcctgtcagatgggatacgaggggagatac
tgtgagaggtgttcagttggttactatggaaacccgtcagtggcaggcggcaagtgtcgg
cgctgcggctgcagtgattggggctcgctggtcccgctgtgtgacgctctgactggacgg
tgtgagtgtaaggccggggtcaaaggtcacacatgtgaccgctgtgaggagagacacgtc
ctgcaggaagaggagtgtgtgtcgtgtgatgacgagtgtaccggcgttctattggacgat
ctggaacaaatacacaacgacttcctgtctgtcaacctgagcgccgttgccatggcgccg
taccgccagctggtgctgctggagaacgcgacaagagacatccaggcggcgttcccagag
aacggctcggtcgctctgcgtctgtccggattggaggatgaactcagtcatgtgacctct
gacctcagcgctctgctgcagcaggtctcccatctgtctaacgacctggagaaagtgggc
gtgtccaccaaccagagtctttcccagggtgcattgctgctgcaaggaatcagcagcctt
caggaaaacatccaggagcttcagagggaggcagggcttctgaaccagagcgccgcggag
cagctggattcagccaatcagaaggctctgctggaggaggtgactgccatgttggaaacc
ttccgcgccgtcaacatgtcggccgctggggcagcggccaatcaggagctccgtctgtcg
gggtcgctactccgctcgctgcacgaggacttcctgtccagcagagcgccggttgaggac
aggctccgccccctctccgcacacctctctgtcgtcatggaaacactgcaacacgcagac
acacagctgagcaacaacgcacagcgaaacacacaaacacacacactgctggacgccaca
cacacacagctgcaacactaccagtgtgcgtgtcagaacctgagtgtggacttcctgttg
ttggacggagagatggaggagagtcagctgctgctggccgacaccgtcgacctcacggag
gaaatcaccaacagcacctcaatggtggatcagctgagtgagcagctggctcggtggcgc
cccctgctgaggaaccaggttgactctctggttgtgggactgaagatgagcgacgctctg
gagaaggtttacagcgcagaaagccacgcccacctgctgcagagccacgcccactctgtg
cacagctctctgtcgtcggtgtgtaacgtgtctcagaacggcagccgattggttcagctg
gacagtgacatcacagaacgagtggactcggcgcagcaggtcgccgccatcgcccaagcc
gccgcatcgctggctctcaacacgagcgtccaatcagagctgccgctgtcagaagagggc
ggagccagacttaaagccagcgccgcagttttaaaagaaagtcaacgaatcaacgagacc
gctgaagagctgcagctgaatgtttccatggtaaccagccggctgggattggtcagagat
agcgtgcgtaactccagcctactcctacgtcagccaatcagagagctgcacagcctgtct
aacggctcctctgcgttgctacaggtgaccgtgactgcgtctgacctgcaggcggcgctg
cagcggctccaccgcctcaccctgcagctgcagaactcttcttctgtggtggtaaacacc
aacaacaccgtcagggagaccaacaagctggtgacacacacacactctgcagccaatgag
gcgcagcgtaaactggaagaggcggagcatcgtacggagcgtctgatggagcggatcaag
ccgctgagcatgctgggagaaacgctgagcaggaatctgtctgacatcagagagctgatt
gaccaggccagacgccaggccgcctcgattaaggtggcggtccaggcggacagagactgc
gttcggtcctaccggccgcagatcctctccagtaacttcaacactctgagtctggtcgtc
aagacaaccagcccagaaaacctgctcttcttcctgggcagcaacaccacggtggacttc
ctggccgtagagatgcatgctgggaaggtgtctctggtttgggacgtgggttcaggcagc
agcagactggactttcctggagtggacatcagcaacaaccagtggaccagaatcaacgcc
acacggttcggggcccacgtctctctgtcggtccatcagctggaggcagaggcggcgccg
ttgcccgcggtgacggcgacgtcaccgggcccagcccgagttttagacatcgacaggaac
tctgtgatccatgtcggaggactcggagcagagacccggcgggaggcggcgctgagggcc
gacagcttccagggctgtctgggggaagcctcgctcaacgagaagaacatcggactctgg
aactacgtacgcagggacggagcctgtggaggctgtttcagcagtccccaggcggaggag
acctccttccactttgatggatctggcttctcattggttcagaagtctctgcgagcgacc
tccacctccatcgtgctgctgttcaaaacgctgtcgccgggcggattactgctctacctg
gcctccaacaacactagggacttcctgtccatggagctggtggaggggcgtgtgcatctg
acctttgaccttggctctggcgctctgaccttgacctccagcaggaagtacaacaccggc
gtgtggtacaagatcacgctgcagaggagcaaacgcaaaggttacctgtccatcatggct
gccgaccagtcatcagagaaggaggtgttggaggcggagtctcccggctcggcctcggac
ctgaaccgctccgacctggaccccatctacatcggaggacttcctgcctcccgcccaatc
aggcgacaggtggtgtccaggtcgtacgtgggctgcataaagaacgtggagatcgcccgg
tccaacttcgacctgctgagagacgcgtacggcgtccgcaagggctgcgtcctcgaggcg
gtgcgcagcgtgtcgctgttggccggcggcttcgttgagatcgcggcgccatcattcggt
caggaggcggagcttctcttctcgttctcctccctcaaccaatcaggagtcctgctggct
gccttcagtgaggagcggacacagagaaagcacttcctgtcggtgcagctgttcttggga
gcgctggaggcggagcttggcgaggtgggcggggcttctcggagggtgacggtggtgaaa
cctgacggaggatccttcagcgacggaacaacacactctgtcattatcaacgtcaacagg
aagtctctgtctctgcaggtggacgaggaacaaaggaagtctgtctctctgttgccgggt
ggattatctcgtctgtctccagcctctttcttcattggtgggctgccatcaggggaggag
tctcgtcttccaatcagattacaggaagtgtaccggagtttcagaggctgcatccaacac
ctggtgctgtccggagcactggtggacctatcaggggctgtgaagtatgagggggcggag
ctcgacagctgcctattggaggagagggccggaggggtagtgcttcctgaagaccaggat
gtagagccaactgctgaccccgcccccccacctggagccccgcccacccagcagggcgcc
ctcccacccggagcgctcacgtgtgcgttggaggtggagcctagcttcctgccgacggcg
gttcagtttggttcgtccaaacacagtcacatgaccttcatcatcaccccggacgccatc
aggaagagtgtctctctgaggttgtcggtgcgaagccgggcgttggacggtttgcttctc
ctcctctcagactccaaacagatggacttcgtcgtcctcagactgagcgccggacgcctg
atgatgtcagcagatctgggcagaggcgccgcctccatcacctcctcggtcatcgttaac
gatggagagtggcacgctgtgagcggcgaggtgagccggcggtccctgtcggtgtcggtg
gacgggtcgagtccagactctgcgtctctcagaggcaaccagctggacgtagacagcaga
ctctatctgggaggactgccacacacacactccacccgcaggatcaatgccagcagcagt
ctcccaggatgtgttcgctccgtcagtctcaacggtgccatgttggatctgtccaagccg
gcctcgcaacatgatgtcacttcctgtttcaccaccgaccagaaaggaagttacttcaat
ggcagcggatacgccactctcatgcgtgatggttataaggtcggctccgacgtgtcggtg
tctctggagtttcgaacgagccaatcagacggagtgtttctgggaatcagcagcgccaag
gtggacgccatcggactggagatgatcaacggacaggtggtgttcaacgtgaataacggc
gctggccgcgtgtcggtgcgttccattggtccgttgctctgtgacggccgctggcaccgc
ctgctggccaggaagagcaaacacagcctgagtctgagcgtcaacgggcggagctactcc
acccccaacccttacccacaatccacctctgccgagaccaacaaccccgtctacctggga
ggctttccagtgggggtgagacagaactgcctgtctaccatctcgaggttcagaggatgt
ctgaggaacgtgcagctcgttaagtctcacctgtctgacgctctggacctaggctccgcc
cacttcctgtcgggcgtcactcccaactcatgtcctgttgccaggcaacggccagccggc
ctctga
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