Sander lucioperca (pikeperch): 116062464
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Entry
116062464 CDS
T07345
Symbol
prom1a
Name
(RefSeq) prominin-1-A isoform X1
KO
K06532
prominin 1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sluc04147
]
116062464 (prom1a)
04090 CD molecules [BR:
sluc04090
]
116062464 (prom1a)
Exosome [BR:
sluc04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
116062464 (prom1a)
CD molecules [BR:
sluc04090
]
Proteins
116062464 (prom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
Cyt_bd_oxida_II
DUF3587
Motif
Other DBs
NCBI-GeneID:
116062464
NCBI-ProteinID:
XP_031173003
Ensembl:
ENSSLUG00000005400
LinkDB
All DBs
Position
1:41890481..41980378
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AA seq
905 aa
AA seq
DB search
MWKTGILLLLWVFLASGELQQETEPRRLPPPGKLDFGYVPAGVYETLAHYEPGPIGILFH
MVHVFLHVVQPNPFPQDLIVKLAKDKFGAIQTEYQKPENIVLTLQAIYYEIGFLVCAAVG
LLFAVLVPIAGLFFCMCRCCDNCGGEMHQRQRKNADCRRGLLGTLLFATSLVITIGVLCA
YAANQNLSSQVKNIRRLVNSNMRDLHTFANDTPMQIDYLISQYATAKNKVIYDLDNIGPL
LGGRIHDQLDKEVHPALDRVLNMAGVKIERAIKAMGETKEALENVSAGLEVLQVGTGKLN
FNLSLVRTSINRTLNDPGCHDEESDATSAQLCRNIRQSLFQLQISANFTRLPNVNAQLEK
VNHVMKTDLSAIVQRGYSSLNDTPHTVIEQTKSVVESVQSLVDDIGKNISSYSKVFPVQS
SLSNFTIFVSHAHAKIEDYYPEIDRMDFYRWIGCIALCCMVVLVLAFNYLGLLCGTLGYD
KHASPTTRGCISNTGGTMLVAGVGFSIIFSWVLMGVVTTIFLAGGNMEKLVCDPFQTKEV
FKVVDTPYLVNSDWRNFIPGYIYNDSDLELTAESLYSTCKENKGIYSAMRLDKVFNISLF
LNTTVFTKDVVSHLDSVKIDLRGIILLETEGKQNLLDFSEAGLSEINYADYLEEVNKGVT
VIDLLTFTRELEAQTDLMPRGALQTALKGHVGTLRQIHSQQIIPMEQAMKYVRARSALNQ
GIRFLERTASDLPNKVLAIIDAIEAAQYLISQNATHLINRETEKYTATIVGYFHQYIEWV
KTSLAMDVAPCKPFSNMVDTAEIIACSFLVDSMNAFWMGMGCSTIFLLPSIILAVKLAKY
YRRMDTEDVYDDIETIPMKTMEIGNNGYHSDSSQGIPNPMMTSIPTYDTMNRFPRASAPP
RHIDW
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagaccgggatcctcctgctgctgtgggtgtttttggcgtccggcgaactccaa
caagagacggagccgcggagactcccacccccgggaaagttggatttcggttatgtgcct
gcgggagtttacgagactctggcccattacgaaccgggacccatagggatcttgttccat
atggtgcacgtttttctgcatgtcgtgcaacccaaccctttcccacaagatcttattgtc
aaactggcaaaggacaagtttggagccattcagactgaataccaaaagccagagaacata
gtgctgacccttcaggccatctactacgagataggcttcctagtatgtgcggcagttggg
ctgctgttcgcagttttggtgccgatagccggcctcttcttctgcatgtgccgctgctgt
gacaactgcggcggcgagatgcaccaacgccagaggaagaacgcagactgccggcgtggc
cttctgggaacactactctttgccacctcactggtcatcacgatcggagtgctgtgtgca
tatgctgccaatcaaaacctgagctctcaggtgaagaacatacggagattggtcaacagc
aacatgagggacctgcacaccttcgctaatgatacaccaatgcaaattgattacctaata
tcccaatacgccacagccaagaacaaagtcatctatgacctagataatataggtccatta
ttaggtggaaggatacacgatcagttggataaggaggtccatcctgccttggacagagtg
ctcaatatggctggagtgaaaatcgagagagccatcaaagccatgggagaaaccaaggag
gccctggagaacgtcagtgcaggtctagaggtcctgcaggtaggaacagggaaactcaac
ttcaacctgagcctggtccggaccagtatcaaccgcaccctcaacgacccgggctgtcat
gacgaggagtcagacgccacctctgcccagctgtgccgcaacatacgccagtctctgttc
cagctgcagatcagcgccaacttcacacggctaccaaacgtgaatgctcagctggaaaag
gtgaaccatgtcatgaaaacggacctcagtgctatcgtccagaggggctactcttcttta
aacgacacgccacatacggtgattgaacagaccaaaagtgttgtggagagtgtacagagt
ttggtggacgacattggcaaaaacatcagcagctattccaaggtattccctgtgcagagt
tccctgtccaacttcactatcttcgttagccatgcccatgccaagattgaggactactac
cctgaaattgacagaatggacttctacaggtggattggctgtattgctctttgctgcatg
gtcgtcctggtcctggcctttaactacctgggcctgctgtgtggcaccctgggatacgac
aagcacgcctcacctacgacacgaggctgcatctccaacacaggaggaacgatgctcgtg
gccggcgttggatttagcatcatcttctcctgggtgctgatgggagtggtgaccaccatc
ttcctggctggaggtaacatggagaaacttgtttgtgatcccttccaaaccaaagaagtc
ttcaaggttgtggacaccccatatctggtcaactcagattggaggaactttatccctggc
tacatttacaacgactccgacctagagctgacggcagagagcttgtacagtacctgcaaa
gagaacaaaggcatctactcagccatgcgtctggacaaagtcttcaacatctccttgttc
ctgaacactacagtgtttactaaggatgtggtcagtcatctggacagtgttaagatcgat
ctcaggggaataatcctgttagagacagaggggaagcagaaccttctggatttctctgaa
gcagggctgtcagaaatcaactatgcagactacctggaagaggttaacaaaggggtcact
gtgattgacctgctcacgttcaccagagagctggaggcccagacagaccttatgcccaga
ggcgctctgcagactgctctgaaaggccacgtcggtactctgcggcagatccacagtcaa
cagatcatccccatggaacaggccatgaaatatgttagagcaaggagcgcactgaaccag
ggtataaggttcctggaaagaacagcctcagacttgccaaacaaagttttagcaattatc
gatgccattgaagctgcccagtacctcatctcccagaatgctacacatttaatcaatcgg
gaaacagaaaaatacacagcgaccattgttggctacttccatcaatacatagaatgggtc
aaaacatctttggcgatggatgtcgcaccgtgcaagcccttcagcaacatggtggacacg
gcagagatcattgcttgcagttttttggtcgactccatgaacgcattctggatgggtatg
ggctgcagcactatcttcctgctcccgagcatcattctcgcagtaaaactagccaagtac
taccgcaggatggacacagaggatgtttacgatgacattgagacaattcccatgaaaact
atggaaattggtaataatggttatcatagtgacagctcacaaggtatcccaaatcctatg
atgacaagcatccctacctatgacactatgaacaggttcccgcgggcctcggctcctccg
aggcacattgactggtga
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