Sander lucioperca (pikeperch): 116062486
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Entry
116062486 CDS
T07345
Symbol
rapgef2
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04010
MAPK signaling pathway
sluc04517
IgSF CAM signaling
sluc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116062486 (rapgef2)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116062486 (rapgef2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116062486 (rapgef2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
PDZ_6
RA
cNMP_binding
RA_2
ABhydrolase-like_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116062486
NCBI-ProteinID:
XP_031173032
Ensembl:
ENSSLUG00000004024
LinkDB
All DBs
Position
1:41223906..41345616
Genome browser
AA seq
1657 aa
AA seq
DB search
MASYVDNSFRQAVMMNPAERTQQDLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEA
NEVLYYPDDIGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPTGKPPIARGYHTECNKP
QLPADFSRLHLADALHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATENEPGDMDLSGLP
ETAVDSEEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPEGRTEILCMGNSF
GVSPTMEKEYMKGVMKTKVDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTSERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGKKLLEW
FHDPSLRDKVTRVVLLWVNNHFNDFEGDPPMTHFLEEFENNLEKEKMCGHLRLLNIACAA
KAKPRLVTLTKPSRDSPLAFSLLGGQEKGFRIFIDAVEPGSKAAEVGLKRGDQILEVNGQ
NFENVQLNKANEILKNNTHLSITVKTNLLVFKELLTRPEQDHDLDGEEEHDRKNGAPHLP
KIGDIKKASRYSIPDLAVDVEQVMGLEKVSKKAKANSVGGRNKLKKIFDKTLTSILPPKP
YNDVCVGQSQDDIIVGMKQSKQIAPALPVSGNLSSSNPDLLQSHHRILDFNNQPVPVILN
MSDQVLRVFKADQQSRYIMIGKDTTAKEVVAQAIREFALTAAAEAYSLCEVSVTPEGVIK
QRRLPDQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQDLLREGQISLLQLSTVEVATQ
LSMRAFELFCAIEPTEYIDDLYKLRSKTGSASLKRFEEAINHETFWVATEVTREPNQLKR
MKTVKHFIKIALHCRECKNFNSMFAIISGLNLAPVSRMRGTWEKLPSKYEKLFGDLQDLF
DPSRNMAKYRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEI
RHVGRMASVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVNQTGGHKKRVRRSSFLNA
KKLYEDAQMARKVKQYLSNLSLETNEESLQTLSVQCEPSISTLPKNAGGKRPDTSPVVSR
AASQQRGQLAKGNQALQVPAVALYPSRKKVPVKDLPPFGTSSPQSLKKILSLSEEGNERH
RRQPEDTVSNASSQLSSPPISPQSSPKKGYNRMGDAYSDSGHSEISSRSSLVSNSSFDMA
QEERRLRHSGGVGESHIGGQRLERRATTDPDQYSLGSYSSMQDCRGIYTGCPTVLSSPSS
EELTQDQGDRVSLDAADSGRGSWTSCSSGSHDNIQTMQQGRSWETLAFGGGGGGGGIGGL
PPGGPEALLGGPAALWAAQARGSWASASSSSSSAAYWGEDSEGDTGTIKRRGGKDVNADP
ETSSITSTGSEEAKQLGRPSPSPITAGGKGLLSRKESRYREPPPTPPGYTALTISDLAEV
QHPAAPSVTTSTATHSGRRPPDYTTALQRSRMVTQSPDSHLAHQGAKQRTGGLHRTRSPA
EEQEAEEEEEGESLSSKLIALRKPKPLAQHTPETPRP
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttatgtggataacagctttcggcaagctgtgatgatgaatccggctgaaagg
acgcaacaggacctggagattgtctactcgtatctccacgggatggaggccttgtcgaac
ctgcgagagcaccagctgaggataatgtgtgagacggtgcgttatgagagacatgaggcc
aatgaagtgctatactaccctgacgacatcggaagctgctggtacatcctgttgtctggc
tcagtcttcatcaaggagtccatgttccttcccagaagcagttttgggaagcgatcagca
ggcagcttgcggcgtggatgtgagtgcatcgtcctggaaccctcagagatgattgtggtg
gactatatggatgaaaatgaggagtactttcagcggcaagcctcgcacagacagtcccgt
cggcgctttcggaagatcaaccagaaaggggagcggcagacaatcatcgacaccgtggat
ccgtaccccaccggaaagccgcccatagcccggggataccacacggaatgcaataaacct
cagctccctgcagacttcagcagacttcacctggccgacgccttgcacccacaggtgacc
cacgtctcctccagccactcaggatgtagtatcaccagcgactctggaagcagcagcctg
tcagacatttatcaggccacagaaaacgaaccaggtgacatggacctgagtggcttgcca
gagaccgccgttgactccgaggaggacgacgatgaggaggacatcgagcgagcgtctgac
cccctcatgagccgtgacattgtgcgagactgcctggagaaggaccccatggacagaacc
gacgatgacatagagcaattactggagttcatgcatcagctgccagcatttgccaacatg
accatgtcagtgaggagggaactctgcgccgtcatggttttcgctgtggtggaacgtgcc
ggcaccatcgttctcaatgatggagaggagcttgactcgtggtcggtgattctgaacggt
tcggtggaggtgacgtaccctgagggccggacagaaatcctatgtatgggaaacagtttt
ggggtgtcaccaaccatggagaaggaatacatgaagggcgtgatgaagaccaaggtggat
gactgccagtttgtgtgcatagcccagcaggactactgctgcatcctcaaccaggtggag
aagaacatgcagaaggtagaagaggaaggggagatcgttatggtgaaggaacaccgcgaa
ctggatcgcactggcaccaggaaaggacacatcgtcattaagggcacatcggagcgtctc
accatgcacctggtggaggaacactcagtggtggatcccacctacatcgaggacttcctg
ttgacctacaggaccttcctctccagccccatggtcgtgggcaagaagctcctggagtgg
ttccacgaccccagtctcagggacaaggttacacgggtagtcttgctgtgggtaaacaat
cactttaatgactttgagggtgaccctcccatgactcactttctggaagagtttgaaaac
aatctggagaaagaaaaaatgtgtgggcacctcagactgttaaatatagcatgtgctgct
aaagccaagccacggctggtgacgctaaccaagccttctagggactctccactggccttc
agccttctcggaggtcaggagaaaggtttccgcatcttcattgatgccgtggagcctggg
agcaaggcagcagaagttggccttaagcgtggagatcagatcttggaggtcaatgggcag
aactttgagaatgtccagctcaacaaagccaacgagattctgaagaacaacacccacttg
tccataactgtgaaaactaaccttttagtgtttaaagagctgctaaccaggccagaacaa
gaccacgatttggatggtgaggaggaacatgacagaaagaacggtgcgccccaccttcca
aagatcggagacatcaagaaggccagtcgctactccatccccgacctggcagtggacgtg
gagcaggtgatgggcctggagaaggtcagcaagaaagcaaaggccaactcggtgggagga
cgcaacaaactgaagaagatcttcgacaagacgctcaccagcatcctgcctcctaaacca
tacaatgacgtttgcgtgggccaatcacaggacgacatcattgtggggatgaagcagtcc
aaacagatcgcaccagctctgcccgttagtggaaacctctcgtcttcaaacccagacctt
ctgcagtctcaccaccgcatcctcgatttcaacaaccagcctgtcccagtcatactgaat
atgtcggaccaggtattacgagtcttcaaggcagaccagcagtctcgatacattatgatc
gggaaggacacgacggcgaaggaggttgtggctcaggctatcagggagtttgccctgact
gcagcagcagaggcttattcactgtgtgaagtatccgtcacacctgagggcgtcatcaaa
cagaggcggttgccagaccagctgtctaaactagccgacaggattcaactaagtggcaga
tactacctaaagagcaacatggagacagagacgctatgttcagacgaggacgctcaggac
ctcctgcgagaaggccagatctctttgttacagctcagcacagtggaggttgccactcag
ctctccatgcgggcctttgaacttttctgtgccatcgagcccactgaatacatcgacgac
ttgtacaagctgcgctccaagacgggctcggccagcctgaagcgcttcgaggaggccatc
aaccacgagaccttctgggtggccacggaggtgacgcgggagcccaaccagctcaaacgc
atgaagaccgttaagcacttcatcaagatcgccctgcactgccgcgagtgcaagaacttc
aactccatgttcgccatcatcagtggtctgaacctggctccagtctccagaatgagggga
acatgggagaagctgcccagcaagtacgaaaagctgttcggggacctgcaggacctcttc
gacccctcaagaaatatggccaagtacaggaatgtcctcaacaatcagaacctccagcca
ccaatcatccccctgttccccgtcatcaagaaggacctcaccttcctacatgaaggtaac
gactccaaagtggacggcctggtgaactttgagaagctgaggatgattgccaaagaaatt
cgccatgttggtcgcatggcctccgtcaacatggacccggccctcatgttccggaccagg
aagaagaaatggagaagtttaggctccctaagccagggtagcgctaatgcggcagtgctc
gacgtcaaccagacaggcgggcacaagaagagggtgcgacgcagctccttcctgaacgct
aaaaagctttacgaggacgcccagatggccaggaaggtcaaacagtacctgtccaacctc
agcctggaaacgaacgaggagagtctgcagacgctctcggtgcagtgtgaaccctccatc
agtacattgcccaagaatgccggtgggaaacggccagacacctccccagtcgtgtccaga
gctgccagccaacagaggggccagttggccaaaggaaaccaggccctgcaggtccccgct
gtggccctttacccatcccgaaagaaagtgccagtcaaggatctcccaccttttggcacc
agttcccctcagtctctgaagaagatcctgtctctgtcagaggaggggaacgaaaggcac
cggaggcagccagaggacactgtgtccaacgcctcctcccagctctcctcccctcccatc
tccccccagagctcacccaagaagggttacaacagaatgggagacgcctactcggactcc
ggtcacagtgagatctcctctcgctccagcctcgtcagcaactcctctttcgacatggcg
caggaggagaggaggctccgtcactctggaggagtcggggaatcacacatcggaggacag
cggctggaacgaagagccaccaccgaccccgaccagtacagcctcgggtcatattcatcg
atgcaggactgtcgaggcatttacaccggctgccctacagtgctctcctcccccagttcg
gaggagctgacccaggatcagggcgatcgtgtttccctcgatgctgcagacagcggccgc
ggctcctggacttcctgctcttctggttcccacgacaacattcagaccatgcagcagggg
cgtagctgggagactctggcctttggtggaggtggaggcggagggggcattggaggactc
cctcctggcggaccagaggccttattaggagggcctgctgctctgtgggcagcccaggcc
agggggagctgggcatccgccagctcctcctcatcctccgctgcgtactggggagaggac
tctgagggagacactggcaccattaagaggagaggagggaaggacgtcaatgccgaccca
gaaacaagtagcatcacatccaccgggtcagaggaggccaagcagctcggccggccctca
ccatcacctatcaccgctgggggtaaaggcctcctttcgcggaaagaaagccgttaccgg
gagcctcccccaactccccccggctacaccgccctgaccatctccgacctcgctgaagtg
cagcacccggccgccccatctgttaccacgtccacggcgacccactcaggccgccggcca
ccagactacaccacggctctgcagcgctcgcgcatggtcacccagtcgcccgactcccac
ctggcccaccagggggccaaacagcgaacgggcggcctccaccgcacacgctcaccggcc
gaggaacaagaagctgaggaggaagaggagggtgagtccttgtcttccaaactaatcgct
ctgaggaagccaaagccactggcacagcatacacctgagactcccagaccatga
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