Sander lucioperca (pikeperch): 116062610
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Entry
116062610 CDS
T07345
Symbol
pcif1
Name
(RefSeq) mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase
KO
K17584
phosphorylated CTD-interacting factor 1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sluc01009
]
116062610 (pcif1)
Protein phosphatases and associated proteins [BR:
sluc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116062610 (pcif1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PCIF1_WW
WW
PRC2_EED_ins
Motif
Other DBs
NCBI-GeneID:
116062610
NCBI-ProteinID:
XP_031173161
Ensembl:
ENSSLUG00000022423
LinkDB
All DBs
Position
6:27871265..27890195
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AA seq
736 aa
AA seq
DB search
MSNDSQGSVKGEAAITASPSGSASSQDPPLSPSTTAKPPELPDELVQAGWSKCWSRRENR
PYYFNRFTNQSLWEVPVLGQHDVISDPLGLNAAPAEGGAGEGNLGNGQRKRRISEEQGAG
LNSIKRVKAEPTTPISPSTPGAKHWSSAPEDKPTLPATPTTPSPAPAPYRPAVIYWDLDT
QTNAVIREHPPAHHLPPHPEIELQRAQLVTKLRQHYHELCHQREGIDPPRESFNRWLLER
KVVDKGQDPLLPSDCDPVISPSMFREVMNDIPIRLSRIKYKEEARKLLFKYAEAAKKMID
SRNASPESRKVVKWNAEDTMSWLRRDHSASKEDYMDRLEHLRQQCGPHVTAVAKDSVEGI
CSKIYQLSAEYSRRLRQTHLSLLQDPPTTEVCASSQQSRLVYCYPVRLAIPSPPLPRVEL
HFENDMACLRFKGEMVKLNRGHFSKLELLYRYSCIDDPRFEKFLPRVWCLLKRYQVMFGS
GANEGTGLQGALPVAVFEALVRQFGVSFECFASPLNCYFKQFSSAFPDTDGFFGSRGPFL
SFCPVSGSFEANPPFCEELMDAMVTHFEGLLEKSSEPLSFIVFVPEWRDPVTPALTRMEA
SRFLRHQLTVPAYEHEYRSGSQHICKREEMYYRAVHGTAVLFLQNDAGFVKWAPTTERLA
ELTAAYRPSPSRPSTLSSPGPAPVAPGDKDSAPKAADMTQSAVTSPGGHDDNNNNNNNSS
SSSSSSSSPRDKMAAV
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatgacagccagggatcggtgaagggggaggcggccataacagcgtctccctct
ggctccgcctcctctcaggacccacccctttccccttccaccaccgccaaaccaccggag
ctcccagatgagctggtccaggctggatggtctaagtgttggtcccggagggagaaccga
ccgtattacttcaacaggttcaccaatcagagcctgtgggaggtgccggtgctgggccag
catgatgtcatctctgatcctttaggtctgaacgcggcaccagcagagggcggagccgga
gaaggtaaccttggtaacggtcagaggaagaggaggatctctgaggaacagggggcgggg
cttaacagcatcaaacgagtcaaggcggagccgacaacaccaatttcccccagcacgcct
ggtgccaaacactggagctccgcccccgaggacaaaccgaccctgccggccacgcccaca
accccaagccctgcccccgcaccctacagaccagctgtgatttactgggatctggacacc
cagaccaacgctgtgatcagagagcacccccccgcccaccacctgcccccccaccccgag
atcgagctgcagagagcacagctcgtcaccaaactccgccagcactaccacgagctgtgc
caccagagagaaggtatcgatcctccgcgggagtcgtttaaccgctggctgctggagagg
aaggtggtggacaaaggtcaggacccgttactgcccagcgactgtgaccccgtcatctca
ccgtccatgttcagagaggtcatgaacgacattcccatcagattgtctcgtatcaagtac
aaagaagaagcccggaagctgctctttaaatacgctgaagctgccaagaagatgattgac
tccaggaatgcgagtccagagagcaggaaggtggtgaagtggaacgctgaggacaccatg
agctggctgcgcagagatcactccgccagcaaagaggactacatggaccgtctggagcac
ctgaggcagcagtgcggtcctcacgtcaccgccgtggccaaagactcggtggagggaatc
tgctctaagatctaccagctgtctgcagagtacagtcgccggctgaggcagacgcacctg
agtctgctgcaggacccgcccactacagaggtgtgtgcgtcctcccagcagtcccggctt
gtctactgttacccggtgcgtctggccatcccgtcgccgccgctgcctcgagtcgagctg
cactttgagaacgacatggcgtgtctgcgcttcaaaggagagatggtcaaactcaacaga
ggacacttcagcaaactggagttgttgtacaggtacagctgtatagacgacccacgcttt
gagaagttcctacccagagtctggtgcctcctcaagagataccaggtgatgtttggcagc
ggcgctaacgaggggactggtctgcagggggcgctgccagtggcggtgttcgaggcgttg
gtccgacagtttggagtttccttcgagtgttttgcttcgccgctcaactgctacttcaaa
cagttcagctccgccttcccagacacagacggcttcttcggatccagagggccgttcctg
tctttctgtccagtcagcggctcgtttgaagcaaaccctccgttctgtgaagagctgatg
gatgccatggtgacgcactttgagggcctgttggagaagtcctctgaacctctgtccttc
atcgtcttcgtccctgagtggcgtgaccccgtgaccccggctctcacccgcatggaggcc
agtcgcttcctccggcaccagctgaccgtcccggcctacgagcacgagtaccgctcgggc
agccagcacatctgcaagagagaggagatgtactacagggcggtccacggtactgcggtc
ctcttcctccagaacgatgctggttttgtgaagtgggctccgaccaccgagcgtctggct
gagctgacggccgcgtaccgcccctccccctcccgcccctccaccttgtcttctcctggc
cccgcccccgtcgctcctggagacaaagactccgcccccaaggcagctgacatgacgcag
agcgctgtgacgtcaccaggtggccatgacgacaacaacaacaacaacaacaacagcagc
agtagtagtagtagtagcagcagtccccgagacaagatggctgctgtgtag
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