Sander lucioperca (pikeperch): 116062639
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Entry
116062639 CDS
T07345
Symbol
si:dkey-230p4.1
Name
(RefSeq) trichohyalin
KO
K16464
centrosomal protein CEP250
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116062639 (si:dkey-230p4.1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sluc03037
]
116062639 (si:dkey-230p4.1)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
116062639 (si:dkey-230p4.1)
Cilium and associated proteins [BR:
sluc03037
]
Other cilia and associated proteins
Other cilium assembly proteins
116062639 (si:dkey-230p4.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
DUF1664
Motif
Other DBs
NCBI-GeneID:
116062639
NCBI-ProteinID:
XP_035860329
LinkDB
All DBs
Position
8:complement(26181859..26225894)
Genome browser
AA seq
2980 aa
AA seq
DB search
MQSGLLIGWQQEKAELKGEVCRLQEELAESRAEREELESRSRALNDRLCQSVSPSLALSL
QVEGDQREWKRKVREGREREARQALLIHRLQNKVWEYRDRCQHLDVQLQDNRTQLLNTER
RIRDEYSDSLESTLIRLEEEQQRSVGLADTNALLREQLSQSEQANQALREDLQKLTSDWT
RAVEEAERREDDWRRERECRSGLEGQHQARLLSVWRTVVALRRHCHTVKTAADRDLWQLR
AEFSRLSSSLLSSWDSVSSSLRPSAPPQDSTLTLPPLSSTLTLPPLSSTLTLPPQDSSAS
LPPLISSSTLGSFSLGDLEHREEEEDEEEEQEQEQEREISELKRLHEKKVSQLTERIAEL
SLSLQAEDSQREEREREAERHRDTERSLQSVSQAVVKLSRVLSSSRSLCVSPDSVLSLDL
SSLLSVLSLTESALQRRHEELQGAELSVRRLSEEKTTAELRVKQLEDDNQLLHTHSQHTQ
LELTHTVDLLSREQEVSSSLRLQLEEVQKREEEVKRERERLRRDRDRQEERNRHLETQTL
RRVESELLENVQLTEREALHRMEIHTLKGALERQQLDRQRAEDEAADARDALQKSRESVL
CLSSSECVLKREVEERLHALEKMAALNSSLASDKRELNKQLLQLECELSDSQSQLQAVRS
EVSALQREIKTVTVDLSRLRAQREEEADAVRQLRDRETEMERVMEEKERQLVSLLEERGR
DGGQLKELSSQHASVCVQLQEVQQQLQEALEEVRMRRRQQEEQQRDNRKLQEDTDSLQRR
RETLEDELTQLRCVLVSLQQQLSQQQKTLSQSEVDRCQLHTHIHTLQQAKATLQGEIECL
MGELERATARREDDKESRDRSEEEKEDLRRKEEEEKEEAWQSEREALSQELGMRDGEVEA
LRRRLDALMEEDGERQREVERLREEVTQREARIGHMMERIQRAEGEKERLEEETKRLRTK
SPEVEEERREERLREEEDEEERREKERLREEEDGRRRRREEEGARWRERVEGQEEVMKKL
RKEVFDLGEEKREREQLREEEAKRTEEETEALCDRMERLEREKEEREEEVKRWRGRVEEL
EDEIKKLRRETSELEEKMKRRESLRDGGKEERRRREEERTEERRRREEERTEETEKLCNR
IEGLEKEKEELQAETTRLRKERSELEEERSEMERLREEEVKRTEEETEKLCDRIERLERE
KKELQEEIKKLRKETSELFEERRDKERLKEEEEEEEERRNSEEEAGEAELLRVCLSVARE
ECSEMKQEVQRREEQLERQMGAVRQREEEVEQLKEALRQAEEALHEAEREQQEARVALEQ
EEAREEQMEALLRETQQLLQEERSHQGERELTLSTQARALHEARAESEGARRRAREREEA
CERLEEEVKEWRKAAERSDREAARLNLLLKETQEETQQLRAALEEREETEEEHGRDREAA
RRRSLRLEEKLTEAEEEKRRLQERVREVEEELLKRREDVTSLREQVQKERSRRQEEVSAL
REEVQREREEAQVVLRRTREEVSALREEREREQTEREEIQEELAAIKEEAQRRGGEAQEE
GRERGELQEEVQKEKKENERLQETLRKTENEIKSLREEVKKQQKETKEAQEELTALKEEV
QREQTRSNSDGEESALREEVQKEKKEKEQLQETLMKTETEVKFLREEVRKQQRETEEAQE
ELRRTNRDGEVSTLREEELRRSEKEVMALKEEVKKQQWETTKAQEELYERRESLRKEVQE
EQRRREEIQEELRRAENELTGAREEVQKEKKEKEQLQDTLMKTETEVKFLREELKKQQRE
TEEAQEELRRTNRDGDLSALREELRQREEAQEEEVKKQQKETKQALEELTALKEEVQTRS
NSDGEESALREEVQKEQREAQKELMKRREDVTSLREEVKKQQREMKEAQEELTALRQEAQ
EKRRQREEIHEELTALREEVQKEQKEKDQLQETFITTENEMISLREEVKKQQRETEAAQE
ELTALKEEQRRTDNEFRVIREEVQKEKKEKEQLQETLMKTETEVKFLREEVRKQQRETEE
AQEELRRTNRDGDLSALREEELRRAENEFRVIREEVQKEKKEKEQLQETLMKTEYEIKSL
REEVKKQQKETKQAQEELTALKEEVQKEKKEKEQLQETLMKTETEVKFLREEVRKQQRET
IEAQEELYERREGLREEAQEEQRRREEIQEELRRAENELTGAREEVQKEKKEKEQLQETL
IKTETEVKSLREEVRKQQRETEEELRRTNRDGDLSALREEVQRQREEAQEEVQKEKEQLQ
ETLMKAENEIKSLREEVKKQQKETKQAQEELTGLKEEVQREQTRSNSDGEESALREEVQK
EQREAQKELMKRREDVTSLREEVQKEQKEKDQLQETFITTENEMISLREEAKKETEEAQE
ELRRTNRDGDLSALREELRQREEAQEEVQKEKKEKEQLQETLIKAENEIKSLREEVKKLQ
REKKEAQEELTALKEEVQREQTRSNSDAEESALREEVQKEQREAQKELMKRREDVTSLRE
EVQEEQREKERLQETLLQTETEVAALREEVQKEQSRKEEAQEELRGVQRSIELMEVSDVS
RSRERAREEKQQMEEEKQQIELRLLLQESQAEGERLREEAEEMERGEVEQLRARAKALEQ
RRSEVTEELQEARRATEKAEEGWRSRVAQMEEELEALRAEVQTLREREEEMQEPEESQVK
ATRGEEMDGPKRRDQLMDGKRKGGEQQQQQQEEEKEEKEEEISSLLQERKEIRRLLRQSE
AEVYTLTQRTDELEKDRDRVRLALERTEAAMIGYRQRAHQQEQSSGAGPNTEQGVGGRLL
VLQRLVAELELEQKRLNKKNSHLENQKDKLKRDRNTLRDTLRQVEAERSRFRQQLTDSSR
SQERAADTTEEEQRLRSRVLELEGQVSQLRLSLAVDQRQRADFIQQSSRNSQWLLSLRQD
LAESLAAVTRQPVPAVLQSETQRLDRSLREEELRLSLSQS
NT seq
8943 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcggggctgctgattggctggcagcaggagaaggcggagcttaagggggaggtg
tgtcgtctgcaggaggagctggctgagagtcgggcagagagagaggagctggagtccagg
agcagagctctgaatgaccggctgtgccagtcagtgtctccctcactcgccctctctctg
caggtggagggggatcagagggagtggaagaggaaggtgagggaggggagagagagggag
gccagacaggctctgctcatccaccgcctgcagaacaaggtgtgggagtacagagaccga
tgtcaacatctggacgtccagctgcaggacaatcgcacacagctgctcaacaccgagcga
cggatcagagatgaatacagtgactctctggagagcaccctcatcaggctggaggaggaa
caacagaggtcagtcggtctggctgacacaaatgctctcctccgagagcagctcagccaa
tcagagcaggccaaccaggccctgagggaggacctccagaagctgacatctgattggacc
agagcggtggaggaggcggagcggagagaggatgattggcggagggagagagagtgtcgg
tcaggtcttgaaggccagcatcaggctcggttgctgtcagtttggaggaccgtggtcgct
ctgaggcgacactgtcacaccgttaaaaccgccgcagacagggatctgtggcagctaagg
gcggagttttctcgtctctcgtcctctctcctctccagttgggactccgtctcgtcctcc
ctgaggcccagcgctcctccccaggactccacccttaccctccctcccctgtcctccacc
ctgaccctccctcccctgtcctccaccctgaccctccctccccaggactcctcagcgtct
ctgcctcctcttatctcctcttccaccctgggaagcttctctctgggagacctggagcac
cgagaggaggaggaggatgaggaggaggagcaggagcaggagcaggagcgagagatttca
gagttgaagcgtctacacgagaaaaaagtttcacagctgacagaacggatagcggagctg
tctctctctctgcaggctgaggacagtcagagggaggagagagagagggaggccgagaga
cacagagacacagagaggagtcttcagtctgtcagtcaggctgtggtcaaactgtccaga
gtcctgagcagcagccggtctctgtgcgtgtccccagacagcgtcctcagtctggatctg
tcctctctgctgtccgtcctgtctctcactgagagcgcactgcagaggagacatgaggaa
ctgcagggggcggagctctctgtgcgccggctcagcgaggagaaaacgaccgcggagctc
cgagttaaacagctggaggacgacaaccagctgctgcacacacactcccaacacacacag
ctggagctcacacacactgtggacttactgagcagggagcaggaggtgtcgtcctcgctg
cgtctgcagctggaggaggtgcagaagagagaagaggaggtgaagagagagagagagcgg
ctgaggagagacagagaccgacaggaggagagaaacagacacctggagactcaaacactc
agacgagtggagagcgaactgttggagaacgtccagctgacggagagagaagctctgcac
cggatggagatccacactctgaagggggcgctggagaggcagcagttggacagacagaga
gcagaagacgaggctgctgacgccagagatgctctgcagaagtccagggagagtgtgttg
tgtctctcgtcctcagagtgtgtgttgaagcgggaggtggaggagcgactccacgccctg
gagaagatggccgccctgaactcgtctctggcgtcagacaagagagagctgaacaaacag
ctgctgcagctggaatgtgagctgtcagacagccaatcccagctgcaggctgtgaggtca
gaggtcagcgctctgcagagggagattaaaactgtgaccgtggacctcagccggctcaga
gcgcagagagaggaggaggccgacgctgtccgtcagctgagagacagagagacagagatg
gagagagtgatggaggagaaggagagacagctggtgtccctgctggaggagagagggaga
gacggaggacagctgaaggagctgtcctcccagcatgcctctgtgtgcgtgcagctgcag
gaggtgcagcagcagctgcaggaggcgctggaggaggtgaggatgaggaggcgccagcag
gaggagcagcagagggacaacaggaagctgcaggaggacacagacagcctgcagagacgc
agggagacgctggaggacgagctgacccaactcagatgtgtgttggtgtctctgcagcag
cagctcagtcagcagcagaagacgctctcacagtcggaggtggacagatgccagctgcac
acacacattcacactctgcagcaggccaaggcaacgctacagggcgagattgagtgtctg
atgggagagctggagagagcgacggcccggagagaagacgataaagagagcagagaccgg
agcgaggaggagaaggaggatctgaggaggaaggaggaagaggagaaggaggaggcctgg
cagagtgagagagaggctctgagccaggagttggggatgagagacggagaggtggaggcg
ctccggaggcgtttagacgccctgatggaggaggacggggagagacagagggaggtggag
aggctgagggaggaggtgacgcagagggaggcgcgtatcggccacatgatggagagaata
cagcgggcggagggagagaaggagagacttgaggaggagacgaagagactgagaacaaaa
agccctgaagtagaggaagagaggagagaggagagactgcgagaggaagaagacgaggag
gagaggagagaaaaggagagactgcgagaggaagaagatgggaggaggagaagaagggaa
gaggagggagccagatggagggagagggtggaagggcaggaggaggtaatgaagaaactg
agaaaagaagttttcgacctgggagaagagaagagagagagggagcaactgagagaggag
gaggcgaagaggacggaggaggagacggaggcgctctgcgaccggatggagagattagaa
agagaaaaggaggagcgggaggaggaggtgaagagatggagggggagggtggaggagctg
gaggacgagataaagaaactaagaagagaaacttctgaactagaagagaaaatgaaaagg
agggaaagcctgcgagatggaggaaaggaggagaggaggagaagggaggaggagaggacg
gaggagaggaggagaagggaggaggagaggacggaggagacggagaagctctgcaaccgg
atagagggattagaaaaggagaaagaagaactgcaggcggagactacaagactgagaaaa
gaaaggtctgaactggaagaagagaggagcgagatggagaggctgagggaggaggaggtg
aagaggacggaggaggagacggagaagctctgcgaccggatagagagattagaaagagag
aaaaaagaactgcaggaagaaataaagaaactgagaaaagagacctccgaactcttcgaa
gagaggagagataaggagagactgaaggaggaagaagaagaggaggaggagaggaggaat
agcgaggaggaggctggggaggcggagctactgcgtgtctgtctgagcgtggcgagggag
gagtgctctgagatgaagcaggaggtgcagcggagggaggagcagctggagcgccagatg
ggcgccgtgaggcagcgggaggaggaggtggagcagctgaaggaggctctgcggcaggcg
gaggaggcgctgcacgaggctgaacgggagcagcaggaggcacgggtcgccctggagcag
gaggaggcgcgggaggagcagatggaggcgctgctcagagaaacacagcagctcctgcag
gaagagaggagccatcagggagaaagagagctcacgctctccacacaggcacgggcgctg
catgaggcgcgggcggagagcgagggagcgaggaggagagccagagagagggaggaggcg
tgcgagcggctggaggaggaggtgaaggagtggaggaaggcggcagagcggagcgacagg
gaggcggccaggctgaacctcctcctgaaggagacacaggaagaaacgcagcagctgaga
gccgcgctggaggagagggaggagacggaggaggagcatgggagagacagggaggcagcc
aggaggaggagcctgaggctggaggagaagctgactgaggcggaggaggagaagaggagg
ctgcaggagagagtgagagaggtggaggaagagcttctgaagagaagagaagatgtgacg
tctctcagagagcaggtgcagaaggagcggagcaggaggcaggaggaggtgtctgctctc
agggaggaggtgcagagggagagggaggaagcgcaggtggtgctgaggaggacgagagag
gaggtgtctgctctcagggaggagagagagagagaacaaacggagagagaggagatacag
gaggagctggcggctataaaggaggaggcgcagaggagagggggggaggctcaggaggag
gggagggagaggggggagttacaggaggaggtgcagaaggaaaagaaggaaaatgagcgg
ctacaggagacgttaaggaagacagaaaatgagataaaatctctcagagaggaagtgaaa
aagcaacaaaaggagacgaaggaggcgcaggaggagctgacagccctaaaggaggaggtg
cagagggagcagacgaggagcaacagcgatggggaggagtctgctctcagagaggaggtg
cagaaggaaaagaaggagaaggagcagctacaggagacgttaatgaagacagagacagag
gtgaaatttctccgagaggaagtgagaaagcaacaaagggagacggaggaggcgcaggaa
gagctgaggagaaccaatagagacggggaggtgtctacacttagagaggaggagttgagg
aggtccgagaaggaggtgatggctctaaaagaggaggtgaaaaagcaacaatgggagacg
accaaggcgcaggaagagctctatgaaaggagagaaagtctcagaaaggaggtgcaagag
gagcagaggaggagggaggagatacaggaggagctgaggagggctgagaatgagttaacg
ggcgccagagaggaggtgcagaaggaaaagaaggagaaggagcagctacaggatacgtta
atgaagacagagacagaggtgaaatttctccgagaggaattgaaaaagcaacaaagggag
acggaggaggcacaggaggagctgaggagaaccaatagagacggggatttgtctgcactt
agagaggagctgaggcagagggaggaggcccaggaggaggaagtgaaaaagcaacaaaag
gagacaaagcaggcactggaggagctgacagccctgaaggaggaggtgcagacgaggagc
aacagcgacggggaggagtctgctctcagagaggaggtgcagaaggaacaaagggaggct
cagaaagagctgatgaagaggagagaagatgtgacatctctcagagaggaggtgaaaaag
caacaaagggagatgaaggaggcacaggaggagctgacagccttaagacaggaggctcag
gagaagaggaggcagagagaagagatacatgaggagctgacagcgctcagagaggaggtg
cagaaggagcagaaggagaaagatcagctacaagagacctttataacgacagaaaatgag
atgatttctctcagagaggaggtgaaaaagcaacaaagggagacggaggcggcacaggag
gagctgacagccctaaaggaggagcagaggaggactgacaatgagtttagggtcatcaga
gaggaggtgcagaaggaaaagaaggagaaggagcagctacaggagacgttaatgaagaca
gagacagaggtgaaatttctccgagaggaagtgagaaagcaacaaagggagacggaggag
gcgcaggaggagctgaggagaaccaatagagacggggatttgtctgcacttagagaggag
gagctgaggagggctgagaatgagtttagggtcatccgagaggaggtgcagaaggaaaag
aaggagaaggagcagctacaggagacgttaatgaagacagaatatgagataaaatctctc
agagaggaggtgaaaaagcaacaaaaggagacgaagcaggcgcaggaggagctgacagcc
ctaaaggaggaggtgcagaaggaaaagaaggagaaggagcagctacaggagacgttaatg
aagacagagacagaggtgaaatttctccgagaagaggtgagaaagcaacaacgggagacg
atcgaggcgcaggaagagctgtatgaaaggagagaaggtctcagagaggaggcccaggag
gagcagaggaggagggaggagatacaggaggagctgaggagggctgagaatgagttaacg
ggcgccagagaggaggtgcagaaggaaaagaaggagaaggagcagctacaggagacgtta
attaagacagagacggaggtgaaatctctcagagaggaagtgagaaagcaacagagggag
acggaggaggagctgaggaggaccaatagagacggggacttgtctgcacttagagaggag
gtgcagaggcagagggaggaggcccaggaggaggtgcagaaggaaaaggagcagctacag
gagacattaatgaaggcagaaaatgagataaaatctctcagagaggaagtgaaaaagcaa
caaaaggagactaagcaggcacaggaggagttgacaggcctaaaggaggaggtgcagagg
gagcagacgaggagcaacagcgacggggaggagtctgctctcagagaggaggtgcagaag
gaacaaagggaggctcagaaagagctgatgaagaggagagaagatgtgacatctctcaga
gaggaggtgcagaaggagcagaaggagaaagatcagctacaagagacctttataacgaca
gaaaatgagatgatttctctcagagaggaggcgaaaaaggagacggaggaggcgcaggag
gagctgaggagaaccaatagagacggggatttgtctgcacttagagaggagctgaggcaa
agggaggaggcccaggaggaggtgcagaaggaaaagaaggagaaggagcagctacaggag
acattaataaaggcagaaaatgagataaaatctctcagagaggaggtgaaaaagctacaa
agggagaagaaggaggctcaggaggagctgacagccctaaaggaggaggtgcagagggag
cagacgaggagcaacagcgacgcagaggagtctgctctcagagaggaggtgcagaaggaa
caaagggaggctcagaaagagctgatgaagaggagagaagacgtgacatctctcagagag
gaggtgcaggaggagcagagagagaaggagcggctacaggagacgctattgcagacagag
acggaggtggcagctctcagagaggaggtgcagaaggagcagagcaggaaggaggaggcg
caggaggagctgagaggagtgcagcggagcattgaactgatggaggtgtctgatgtgagt
cgcagcagggagcgagcgagggaggagaagcagcagatggaggaggagaagcagcagatc
gagctgaggctcctcctgcaggagagccaggcagagggggagcgtctgagggaggaggcc
gaggagatggagagaggagaggtggagcagctgagagccagagccaaggccctggagcag
aggaggagcgaggtgacagaggagctccaggaggcgcggcgggcgacggagaaggctgag
gaggggtggaggagcagagtagcacagatggaggaggagctggaggctctgagagcagaa
gtgcagacgctgcgggagagagaggaggagatgcaggagccggaggagagccaggtcaaa
gccacgcggggagaggagatggacggaccaaagaggagagaccaactgatggacggcaag
aggaaaggaggagagcagcagcagcagcagcaggaggaggagaaggaggagaaggaggag
gagatctcctctctgttgcaggagaggaaggagatccggagactgttgaggcaaagtgaa
gctgaggtgtacactctgactcagaggacagacgagctggagaaggacagggatcgtgtc
cgattggctctggagaggaccgaggcagctatgattggctacaggcagagagcccaccaa
caggagcagagctcgggggcggggcctaacacagagcagggtgtggggggcagactgctg
gtgctgcagcgtctggtggctgaactggagctggaacagaaacgactgaacaagaaaaac
tctcatctagaaaatcagaaagacaaactgaagagagacagaaacacactgagagacact
ctgagacaggtggaggcggagcgttcgaggttcagacagcagctgactgacagcagcaga
tctcaggagcgtgccgcagacaccacagaagaagaacagcgcctgcggagcagagtgctg
gagttggagggccaggtgagtcagctccgcctctcattggctgtggatcagcgccagagg
gccgacttcatccagcagtcgtccaggaatagccaatggctgctctccctgagacaggac
ctggcggagtcgctggccgccgtcactcgccagcccgtcccggccgtcctgcagtccgag
acgcagcgattggaccgcagcctcagggaggaggagctccggctgtccctcagccaatcg
taa
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integrated database retrieval system
