Sander lucioperca (pikeperch): 116062839
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Entry
116062839 CDS
T07345
Symbol
nup214
Name
(RefSeq) nuclear pore complex protein Nup214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116062839 (nup214)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116062839 (nup214)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116062839 (nup214)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_NUP159_NUP214
Nup214_FG
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_WDR35_TULP_N
WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
116062839
NCBI-ProteinID:
XP_031173437
Ensembl:
ENSSLUG00000005719
LinkDB
All DBs
Position
14:complement(5167341..5203071)
Genome browser
AA seq
1978 aa
AA seq
DB search
MSDDTDSPPEREMKDFQFRQMKKTRVFDPAEDLPKERTSLLTISNKFGLTFVGLHKTFKV
YLTQDILSDKFDGNANEIVEGTAALAEVNVDLALHHLALSCDELTLSVCGMTEEAGLSLT
FYDVRTFMNKARPQKLPFASLLPAVPPGSLVQDLKWNPVQASMLAVCLSDGCMMILDVTD
SVKVQAELPASNGITCLCWSPKGKQVAAGKMNSTVSQYTPALEEKKVIPCPNFYTSDEPV
KVLDVLWLRTFVFAVVYAAADGSLETPPELVLISLPKKDENVDIKYLNFSESVYGSCTER
QHHYFLSHVEDWDLVFAASAASIEVSVIAAREDKIWELWILEDASRAELPVTETNDDTLP
LGLAIDYTSQQEIYITDEKTLPPAPTMLMLSTEGLLCPFALLNVNPGVKQLVSAPTALAL
DGERQPKPGSLAAQPPKIAASFPSVPATFTNLGLTSAAASTPSAPAAASSAAPFSMVPTA
PVSSASSSFSFSVPTTCSTSAPAFSLEVSTPFGSGSSGFSFVKPPSDTPSAPSAFSFTPS
IKTSGVAAPVPAPTPQSIATASQPTVKLNLNERFSALETAAPQSFPFNPLLPKTVASNSS
SLTTPPLSATKPPAVLTPVRPVQTSTPPTVVQKPAPAAQGRLQTPQAAVSVKALEKQLQQ
KKDSDPIMAGILEEIAHFQKELDDLKARSTRADFKVGTNEEMKELRKESEDLHIFTLEIK
ETTESLHGDIGTLKTTLLEGFAGAEEAKAQSELSRDRNYRQLLYKKPLDPRSEEQLKEIR
RLYQYVMFAVEDVNDVLDVEWEKHLERKKKQKHMVVPGREGLFTTLANNLYIINQQKNRL
DQFIKQLTSLRLYNNTTTPTIHCSSATATTAGLESELESLRDALLKARLDPSPPKTKPKS
PVKISPVKQSQLRNFLSKGQMPPVRSTAPANLSRSAFLSPKYYEDLDDVSSTSSLSLEPH
PADLEEEELQPEPLPVIPPALSTPRHPTVVRTPSILPGFGAIQSTPLTKMNSVQGMGFGL
SPIASPVPTNKINLSGAESTALATKTVKHGAPPTERSIPVTIPAQQAAANAAVRRQMANQ
KTAVVSTSLTESTLKTVPQVVNVQELKDKGPSMQVSNIISSSVPDPAAPVFATVSSNQAK
RNPTQGMQKMSAESTTTPQTSFVFGQSSKPDVSVAPASSAEQNTSKGFSFASGSTGFSFG
SVTQGAGISQVKDVNKFSFGGNGKMMFGQTGEEPFSLTPKSTSPALGTGSPTLPPYPSAD
KPASTTTASRMEPPPLKTIGGETLGCFSGLRVGHGEEAKDSSAKAAAGSFTSGETGLGMG
KGAAQFSFVAGPQKSADDSTGADLSKGAASGSLFKPPEPNPKPAFSVTQSSSTASASPTS
FGSLLAASSDASQEPKVSPQPSEPTPPPDKEPSTGPAVVSTLVVPEPAADAADTETATAA
AAVTAPTPPLPLATTAPTPDPPSSITAPTEAIPPSTASAAATVDATPDSTTTTPLPTSAA
AVAPVSQVAPPAFQVPSSDKPGSIFTQPAPTITDSSSLGLTPIISTVAAAATTTTPAAVN
STTTTDASTVFGQPAAPPASSAPTAPASTGFGSTAFGTSTGTVFGKSVFGQVSGFGQPAS
NTETSGGFSFCQSAFGASSNSATTGGVLFGAATATNASSFSFGTSSANTASSTGSGLFGQ
TTTPAFGQSSGFGQAPVFGSNTTTSSSTGFSFGQPSAFGCSSATPVFGQQASSGSVFGQQ
QPSSGGTLFGSNSANTAGSAAGGGFFSGLGGKPSEDAANKNPFGTSVSTGGFGQPAQTGA
NTLFGSSGAKTFGFGQSSFGEQKPSGTFSTGAGSVASQGFGSFSSPAKSGGFGSAPVFGS
PPSFGSTQAFGSAAAFGSSPSFPNNMVPSAGKVFGEGTAAANMGGFGFASPPSGPSFGAL
ANQSAPSFGGLAQQGSGFGSQPSSFSGFGQQPQTGGFSGNTFGSANQSSPQTFASWRS
NT seq
5937 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgatacagactcccctcctgagagggaaatgaaggactttcagtttcgtcag
atgaagaaaacaagagtctttgaccctgctgaagatttgcccaaagaaagaactagtctg
cttaccatctcaaacaaatttggtttaacttttgtcggactccacaaaacattcaaagtt
tacctaactcaagacattctgtctgataaatttgatggtaacgccaacgaaatagtcgag
gggacagcagcattggcggaggttaatgtggatctggctctgcaccacttggctctcagt
tgtgatgaacttaccttatcagtatgtggcatgactgaggaggcgggtttgtccctcaca
ttctatgatgtccgcaccttcatgaacaaggcaagaccacagaagctaccttttgcatca
ctgctgccagcagtaccccctggcagtttagtgcaagacttgaagtggaatcctgtacag
gcatccatgttggctgtctgtctgtctgacggctgtatgatgattttggatgttactgac
agtgtcaaagtgcaggccgagctacctgcttcaaatggcatcacgtgtctttgctggagt
ccaaaaggaaaacaagttgctgcaggaaaaatgaattccacagtcagtcagtatacacca
gcactagaagaaaagaaagttatcccatgtccaaacttctacacctctgacgaacctgtc
aaagttctggatgtgctgtggctgagaacctttgtgtttgcagtggtatatgctgctgca
gatggctcccttgagactcctcctgagctagtgttgatctcccttcctaagaaggatgag
aatgtggacataaagtatttgaactttagtgaatcagtgtacggaagctgcactgaacga
caacaccactactttcttagccatgtagaagactgggaccttgtgtttgcggcatcagca
gcttccattgaagtcagcgtcatagccgccagagaggacaagatctgggagctttggatc
ctggaagatgcaagtagggctgagcttccagtgaccgagacaaatgacgacactctgccc
cttggcttagccatagactacaccagccagcaggagatctacatcactgatgagaagacc
ttgcccccagcgcccacaatgctgatgctctccacggagggattactatgcccatttgct
ctgctcaacgttaatcctggggttaagcaactggtctcagcccccactgccctcgccttg
gatggggagagacaacccaagccaggttccttggcagcccaaccacccaaaattgctgcc
tccttcccatctgtcccagcaacattcacaaaccttggtcttacttcagcggctgcttct
actccttcagcccctgctgcagcttcctccgctgccccgttcagcatggttcccacagct
cctgtttcgtcggcatcgtcaagcttcagtttctcagtgccaactacgtgctccacctct
gcaccagctttctccctggaggtgtccacaccttttggctcagggtcctcaggcttctcc
tttgtcaaacctccctctgacaccccctcagcaccttcagcgttttctttcaccccttcc
atcaaaacatcaggagtggcagctccagttccagctccaacaccccagagcattgctact
gcctctcaaccaacagtgaaacttaatctaaatgagaggttttcagcactggagaccgca
gcaccacaatctttcccctttaatcccttgctgcccaaaaccgttgcctccaattccagt
agtttgaccacccctccactctcagccactaagccaccagctgtgttgactccagtgcgt
ccagttcaaaccagcacaccacccacagtcgtccagaaacctgctcctgctgcccaaggc
cgtctccaaactccacaggcagctgttagtgtgaaggccctggagaaacagctacagcaa
aagaaagactctgatcccattatggctggtatattagaggagattgcacacttccagaag
gagttagatgacctcaaggcacgaagcacaagagctgacttcaaggttggcacaaatgag
gagatgaaggagttgaggaaggagtcagaggacctccatattttcaccttggagatcaag
gaaacaacagagtctctccatggggacattggtacactgaagaccaccttactggagggt
tttgctggggcagaagaagccaaggctcagagtgagctgagcagagacagaaattacaga
cagctactgtacaaaaaacctctggacccccgcagcgaggaacagctcaaggagattcgc
aggctttaccagtatgtaatgtttgctgtggaagatgtaaatgacgtactggatgtggaa
tgggagaaacacctggagaggaagaaaaagcagaaacacatggtcgtgccagggcgtgag
ggactatttactacactggccaacaacctgtacattatcaaccagcagaagaacagactg
gaccagtttattaagcaactcacttcactgcgcctctacaacaacactaccactccaact
atacactgcagttctgctacagcaacaactgctggcttggaaagcgagcttgagagttta
agggatgcactcctgaaagccagactggacccctcccctcctaagaccaaacccaaatct
ccagtcaagatatcaccagtgaaacagtcccagctgcgtaactttctctcaaaggggcag
atgcctcctgtccgctcaactgcaccagccaacctgtctcgctcagccttcctttcacct
aaatactacgaggacttggatgatgtaagctctacgtcctccctgtccctggagccccac
ccagctgacttggaggaggaggaactgcagccagaaccccttcctgtcattcctccagca
ttgtccaccccccgccatcccacagttgtgaggaccccctctatcctgccaggcttcggg
gccattcagtccacccccttaacaaaaatgaactcagtacagggcatggggtttggactc
agccctattgccagccctgttccaaccaataagatcaacctcagcggggctgaaagcact
gctcttgccacaaagacagtaaaacatggagccccaccaactgagaggagcatccctgtc
accatcccggcccagcaagctgcagccaatgccgctgtacgcaggcagatggccaatcag
aagacagctgtcgtcagtacttccttgacagagtccactttgaagactgttcctcaggtg
gtcaatgtccaggagctcaaggacaaagggccttcaatgcaggtttccaatatcatcagc
tcatcggtaccagatccagcagctccggtctttgcaacagtttcttccaaccaggccaaa
cgaaaccctacccaaggtatgcagaagatgtctgctgaaagtacaaccaccccacagaca
agctttgtgtttggtcaatcatccaaaccggatgtttcagtggctccagctagctcagca
gagcaaaacaccagcaaaggtttctccttcgcatcagggtccacaggcttcagttttggt
tctgttacacagggagctggaatctcacaagtgaaggatgtgaataaattctccttcggt
ggaaatggcaagatgatgtttggccagactggagaggagccattctccctcaccccaaag
tccacctcccctgctcttggcactgggtctcccaccctgcctccctacccgtcagctgac
aaacccgcctctaccacaactgcctccaggatggagcctccaccccttaagacaattgga
ggagaaactctgggttgtttctctggactacgtgtgggccacggagaagaagcgaaagat
tcatccgcaaaagcagctgctggctcatttacctctggagaaactggacttggtatgggc
aagggtgcagcacagtttagctttgttgcaggtccccaaaagtctgcagatgattctaca
ggagcagacttgtccaagggggcagcgtcaggcagtttgttcaagcctcctgaaccgaac
cccaagccggccttctctgttacccagtctagctcaactgcctcagcttcacctacgtct
ttcggtagtcttcttgcagcttcttcagacgcctcacaggaaccaaaggtttccccacag
ccttcagaacccacaccaccccctgataaagaacctagtactggaccagctgtagtgagc
acccttgtagtacctgagcccgcagcggatgcagccgacacagaaacagcaacagcagca
gctgcagttacagcaccaacacccccacttcctttggccacaacggcccctaccccagac
cctccctcctccatcaccgcaccaactgaagcaatccctccaagtacagccagtgcagct
gccacagttgatgccaccccagacagcaccaccaccactcctctgcctacttccgctgct
gctgtagctcccgtctcccaggtagctccaccagcgttccaggtgcccagttctgacaaa
ccaggttccatttttactcaacctgcccctacaataacagacagcagttcccttggactt
acacccattatcagcacagttgctgctgcagccaccactaccacccctgctgctgttaac
agtacaactacaactgatgctagcactgtgtttggacaacccgctgcacctccagcttcc
tcggcccctacagccccagcatccacaggatttggctcaacagcgtttggtacatcaact
ggaacagtttttggcaaatctgtgtttggccaggtgagtggctttggccagcctgccagc
aacacggaaacatccggtggcttttctttttgccaatcagcatttggagcaagttctaac
agcgcgactactggaggagttctgtttggtgctgctactgctaccaatgccagttccttc
tcctttggcacgagcagtgccaacacagccagcagcactggctcagggctgtttggacaa
accacaacaccagcatttggccagagctctggatttggccaagcgcctgtgtttgggagt
aacaccaccacatcctcatctacagggttcagctttggacagccctcagcttttggctgc
tcttctgccacccctgtgtttggccaacaagctagcagcggaagtgtatttggacagcag
cagccatcatctggtgggactctgtttggctcaaattcagccaatacagcaggctcagct
gctggtggagggttcttctctggccttggaggcaaaccaagcgaagatgctgccaacaag
aacccatttggcaccagtgtctccaccggagggtttgggcagcctgctcagacaggtgcc
aacactctgtttgggagtagcggtgccaagacctttggatttggacagtcgtcctttggt
gagcagaaacctagtgggaccttcagcaccggtgcagggagtgtcgcatcccagggattt
ggctccttctcttctccagcaaaatcaggtggttttggcagtgctccagtgtttgggagc
cccccttcctttggtagtacccaagcatttggttctgcagcagcatttggctcaagccct
tccttccccaacaacatggttccctcagctggtaaagtctttggagagggaacagcagct
gccaacatgggaggatttgggtttgcctcacctcccagcggcccgtcctttggtgctcta
gccaatcagagtgcaccgtcattcgggggcctggcccagcagggctctgggtttggaagt
cagcccagcagcttctcaggctttggacaacagccacagacaggaggattctctggaaac
acctttggttccgcaaaccaatcaagtccacaaacatttgccagttggagaagctag
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integrated database retrieval system
