Sander lucioperca (pikeperch): 116062873
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Entry
116062873 CDS
T07345
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X3
KO
K14308
nuclear pore complex protein Nup54
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116062873 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116062873 (nup54)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116062873 (nup54)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
116062873
NCBI-ProteinID:
XP_031173508
Ensembl:
ENSSLUG00000014910
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Position
14:3644452..3653721
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AA seq
578 aa
AA seq
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MAFSFGAATSNPAASTSGFSFGSFGAKTTAASTAAFGFGPAATTTTASSGFGTLTAPGFG
AATTTAAAPATGFSFGSTNTGFGGLGAGNTTAGAFGGFGTNTTTATAPGSTFSFATPSNT
TGSLFGNTQNKGFGFSSGLGAGTTAGTTGFGTGLGTTGLGGFGGFNIQPTQQQPGSLFGQ
QQAQPSQLYQQVTALSAPTLLGDERDSILAKWNQLQAYWGTGKGYYSNNNQPVDFTQENP
FCRFKAVGYSCVPVSKDEDGFVILLLNKKEADVRAQQQQLVECLHKVLGSNQTLTVNVDC
VKALPNDQTEVIIYVVERSPNGTSKRIPATTLFSYLEQANIKIQLTQIGVAMSVTRTELS
PAQLKQLLQNAPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFKELRRRLQIQEQMTKQHQT
RVDIISSDISELQKNQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEH
LRVQLDTIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDADLLREIKQHLKQ
QQDGLSHLISVIKDDLEDIKLIEHGLSDSGHMRGGMLS
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagttttggcgcagccacgagtaatccagcggcaagcacgtccgggttttca
ttcggttcatttggtgccaaaaccacagcagcatcaacagcagcatttggctttggacca
gcagccaccaccaccaccgcctcatccggattcggcactcttaccgcccctggttttggg
gcagccaccaccactgctgctgcaccagccacaggatttagttttggctccaccaacact
ggatttggggggctgggagctggaaacaccacggctggtgcatttggtggatttggaaca
aatacaacaactgctactgcaccagggtccacctttagctttgctactccctctaacacc
acaggaagcctgtttggtaacacgcagaacaaaggctttgggttctcctctgggcttggc
gctgggaccactgctgggacaacaggatttggtactggattaggaacaactggcctgggt
gggtttggaggctttaatatccagccaactcagcagcagccaggaagcttgtttggccag
caacaggctcagcccagccagctttaccagcaggtcactgctctgtcagctcccaccttg
ttaggagatgagcgtgactccatcttagccaaatggaaccaattgcaggcttactggggc
actgggaagggctactacagcaacaacaaccaaccggttgacttcacccaggagaaccca
ttctgcaggttcaaggcggtgggctatagctgcgtcccagtgagtaaggatgaggatggt
ttcgtgatcttgcttctcaataaaaaggaagctgatgtgcgagctcagcagcagcagctg
gtggagtgcctccacaaagtcctgggaagcaaccagacactcactgtcaatgtggactgt
gtcaaagccttgcccaatgaccagacagaggtgatcatttacgtggtggagcgttctccc
aatggcacctccaagcggatccccgccaccacactcttcagttatctagagcaggccaac
atcaagatccagctcacacagattggagtggccatgtctgtcacgcgcacagagctgtct
ccagcacagctcaaacagctgctgcaaaatgcacctgcaggagtggaccctatcatttgg
gagcaggccaaggtggacaaccctgacccagagaaattaataccagtgcccatggtgggt
tttaaggagctgcgtcgcaggctgcagatccaggagcaaatgaccaaacagcaccagacc
agagtggatattatttccagtgatatcagtgaactgcagaagaaccaggcgaccactgtg
gccaagattgcccagtacaagaggaagctgatggatctctctcacagggtgctgcaggtg
ctgataaaacaggagattcaaaggaaaagtggttatgctatccaagtggatgaggagcat
ctcagggtgcagctggacaccattcagtctgaactaaatgctcccacacagttcaagggt
cggttgaatgaattaatgtcccaaatccgcatgcagaatcactttggagctgtgagatca
gaagaacgctacagtgttgatgcagaccttctcagggaaatcaaacaacacttgaaacag
cagcaggatggtttaagtcatttgatcagcgtcatcaaagatgacttggaagacatcaaa
ctcatagagcacggcctgagtgacagtggacacatgagaggaggcatgctgagctga
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integrated database retrieval system