KEGG   Sander lucioperca (pikeperch): 116062873
Entry
116062873         CDS       T07345                                 
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X3
  KO
K14308  nuclear pore complex protein Nup54
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116062873 (nup54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sluc03019]
    116062873 (nup54)
Messenger RNA biogenesis [BR:sluc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     116062873 (nup54)
SSDB
Motif
Pfam: Nup54 Nup54_C
Other DBs
NCBI-GeneID: 116062873
NCBI-ProteinID: XP_031173508
Ensembl: ENSSLUG00000014910
LinkDB
Position
14:3644452..3653721
AA seq 578 aa
MAFSFGAATSNPAASTSGFSFGSFGAKTTAASTAAFGFGPAATTTTASSGFGTLTAPGFG
AATTTAAAPATGFSFGSTNTGFGGLGAGNTTAGAFGGFGTNTTTATAPGSTFSFATPSNT
TGSLFGNTQNKGFGFSSGLGAGTTAGTTGFGTGLGTTGLGGFGGFNIQPTQQQPGSLFGQ
QQAQPSQLYQQVTALSAPTLLGDERDSILAKWNQLQAYWGTGKGYYSNNNQPVDFTQENP
FCRFKAVGYSCVPVSKDEDGFVILLLNKKEADVRAQQQQLVECLHKVLGSNQTLTVNVDC
VKALPNDQTEVIIYVVERSPNGTSKRIPATTLFSYLEQANIKIQLTQIGVAMSVTRTELS
PAQLKQLLQNAPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFKELRRRLQIQEQMTKQHQT
RVDIISSDISELQKNQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEH
LRVQLDTIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDADLLREIKQHLKQ
QQDGLSHLISVIKDDLEDIKLIEHGLSDSGHMRGGMLS
NT seq 1737 nt   +upstreamnt  +downstreamnt
atggcgttcagttttggcgcagccacgagtaatccagcggcaagcacgtccgggttttca
ttcggttcatttggtgccaaaaccacagcagcatcaacagcagcatttggctttggacca
gcagccaccaccaccaccgcctcatccggattcggcactcttaccgcccctggttttggg
gcagccaccaccactgctgctgcaccagccacaggatttagttttggctccaccaacact
ggatttggggggctgggagctggaaacaccacggctggtgcatttggtggatttggaaca
aatacaacaactgctactgcaccagggtccacctttagctttgctactccctctaacacc
acaggaagcctgtttggtaacacgcagaacaaaggctttgggttctcctctgggcttggc
gctgggaccactgctgggacaacaggatttggtactggattaggaacaactggcctgggt
gggtttggaggctttaatatccagccaactcagcagcagccaggaagcttgtttggccag
caacaggctcagcccagccagctttaccagcaggtcactgctctgtcagctcccaccttg
ttaggagatgagcgtgactccatcttagccaaatggaaccaattgcaggcttactggggc
actgggaagggctactacagcaacaacaaccaaccggttgacttcacccaggagaaccca
ttctgcaggttcaaggcggtgggctatagctgcgtcccagtgagtaaggatgaggatggt
ttcgtgatcttgcttctcaataaaaaggaagctgatgtgcgagctcagcagcagcagctg
gtggagtgcctccacaaagtcctgggaagcaaccagacactcactgtcaatgtggactgt
gtcaaagccttgcccaatgaccagacagaggtgatcatttacgtggtggagcgttctccc
aatggcacctccaagcggatccccgccaccacactcttcagttatctagagcaggccaac
atcaagatccagctcacacagattggagtggccatgtctgtcacgcgcacagagctgtct
ccagcacagctcaaacagctgctgcaaaatgcacctgcaggagtggaccctatcatttgg
gagcaggccaaggtggacaaccctgacccagagaaattaataccagtgcccatggtgggt
tttaaggagctgcgtcgcaggctgcagatccaggagcaaatgaccaaacagcaccagacc
agagtggatattatttccagtgatatcagtgaactgcagaagaaccaggcgaccactgtg
gccaagattgcccagtacaagaggaagctgatggatctctctcacagggtgctgcaggtg
ctgataaaacaggagattcaaaggaaaagtggttatgctatccaagtggatgaggagcat
ctcagggtgcagctggacaccattcagtctgaactaaatgctcccacacagttcaagggt
cggttgaatgaattaatgtcccaaatccgcatgcagaatcactttggagctgtgagatca
gaagaacgctacagtgttgatgcagaccttctcagggaaatcaaacaacacttgaaacag
cagcaggatggtttaagtcatttgatcagcgtcatcaaagatgacttggaagacatcaaa
ctcatagagcacggcctgagtgacagtggacacatgagaggaggcatgctgagctga

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