Sander lucioperca (pikeperch): 116062907
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Entry
116062907 CDS
T07345
Symbol
csgalnact1a
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
sluc01100
Metabolic pathways
Module
sluc_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
116062907 (csgalnact1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sluc01003
]
116062907 (csgalnact1a)
Enzymes [BR:
sluc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
116062907 (csgalnact1a)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
116062907 (csgalnact1a)
Glycosyltransferases [BR:
sluc01003
]
Glycan extension
O-Glycan
116062907 (csgalnact1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
DUF5320
ATG14
Motif
Other DBs
NCBI-GeneID:
116062907
NCBI-ProteinID:
XP_031173542
Ensembl:
ENSSLUG00000015121
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All DBs
Position
14:complement(3498829..3527854)
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AA seq
593 aa
AA seq
DB search
MLHAAMLRRGLLAWVSRVGGVLVLLCCSLSLLYVMTCSPPHSDGPPLSHALPRAGPNHPG
LGGTGPGIGAGVGGTGGARAPQSGGQPGVQSYQVLLQEREEQHRLHISSLKKQIAQLKEA
LQERSQQLKGVQESLKRAAGGPAEGQEAGAVSQGGGLGEAQGAKSQQADLQEFLRSQLSK
AEVTAGTRLPSEYAVVPFESFTLQRVYQLEMGLTRHPEEKPVRKDKREALGEVLEMALHS
LNTPSSQQDSRDAAEKTQTSKVYTPSDFIEGITRTEKDKGTLYELSFRGESRNEFRRLVL
FRPFGPLMKVKNERVDTANVPINIIVPLSRRTDKFKHFMHNFREVCVRQDGRVHLTVVYF
GKEQMSEVRSILENTSREVHFKNYTLLQLDEEFSRGRGLDVGARAWKGGNVLLFFCDVDI
YFTVDFLNTCRLNTQPGKKVFYPVLFSQYNPTLIYGSPEHVPPVEQQLVIKKDTGFWRDF
GFGMTCQYRSDFINIGGFDIDIKGWGGEDVHLYRKYLHSNLLVVRAPSRGLFHLWHEKHC
ADELPPDQYRMCMQSKAMNEASHGQLGMLFFRHEIEAHLRKQKQQQNSNPKKT
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgctacatgcagcaatgttgcggcgtggactgctagcctgggtctcccgtgttggaggc
gtgctggtgctcctctgctgctccctgtcgctcctctatgtgatgacctgcagccccccc
cactctgatggccctccactgagccatgctctcccccgtgctggacccaaccaccccggc
ctagggggcacggggccggggattggagcaggcgtaggtgggacgggaggagcacgagct
cctcaaagcggtggacagccgggtgttcaatcttatcaggtgctcctccaagagcgcgag
gagcagcatcgcctccacatctcctccttgaagaagcagatagctcagctcaaggaggct
ttgcaggagcgtagccagcagctaaaaggagtgcaggagagcctgaagagggctgctggg
ggcccagcagagggacaggaagccggggctgtgtcccagggaggcggtctcggggaggct
cagggagccaagagccagcaggcggacctccaggagttcctgcggagccagctgtcgaag
gccgaggtgaccgcaggcaccaggctgcccagcgaatatgcggtggtgccctttgagagt
ttcaccctgcagagggtgtaccagctggagatggggctgacgcgtcaccccgaggagaag
ccagtgagaaaggacaagagagaggcgctgggggaggtgctggagatggccctgcacagc
ctcaacacgccatcatcccagcaagacagcagggacgcagcagaaaaaactcaaacaagc
aaagtgtacacaccatctgacttcatagaaggtatcacccgcacagagaaggacaaaggg
acgctgtatgagctgagcttcagaggggagtccagaaatgaattcaggcgcctggtcctc
ttccgtccctttggaccactgatgaaggtgaaaaatgagagggtggacacagcaaatgtc
ccgattaacatcatcgtcccgctgtccagacgcacggacaagttcaaacacttcatgcac
aacttcagggaagtctgtgtgcgtcaggacggccgggtccatctgacggtggtgtatttt
gggaaagagcagatgagcgaagtccgcagcattctggagaacacatccagggaagtacat
tttaagaactacactctgctgcagctggacgaggagttttctcggggacggggtctagac
gtcggggcccgagcctggaagggaggcaatgtactgcttttcttctgcgacgtggacatc
tacttcaccgttgacttcctcaacacctgccgactcaacacgcagcccggtaaaaaggtg
ttctacccggtgttattcagccagtacaacccaactctgatctatggaagtcctgaacac
gtcccacctgtggagcaacagctggtgatcaagaaagacacagggttctggagggatttc
ggtttcggcatgacctgccaatacaggtccgacttcatcaacataggaggttttgacatc
gacatcaaaggctggggcggggaagatgtccacctgtacaggaagtacctccatagcaac
ctccttgtggtccgagcaccgtcacgaggcttgttccacctgtggcacgagaaacactgc
gctgatgagctccctccagaccagtaccgcatgtgcatgcagtctaaggccatgaacgag
gcctcgcacggccagctggggatgctgttcttcaggcacgaaatcgaagctcacctccgc
aaacagaaacaacagcaaaactcaaaccccaagaagacatga
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