Sander lucioperca (pikeperch): 116063268
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Entry
116063268 CDS
T07345
Symbol
hcn2b
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116063268 (hcn2b)
Ion channels [BR:
sluc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
116063268 (hcn2b)
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
116063268
NCBI-ProteinID:
XP_031174017
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Position
11:37058001..37097717
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AA seq
1052 aa
AA seq
DB search
MDEAEDGDEEPKFQQPRPPQVTSLSGRADHMSSGGTKMKRFTPGGGAASIARKNSNINEL
WLLQDEDSAPVRASGNTASALLCRRDATGGDTVPEAGVIAQGAIGMICNKNGDCRRDPAS
SGSLSSLISRQEMQTDGVVAAEDGKGQAASMDGSITSAGSLTQGPGAEFKTAAAMEKKDS
RVSFSNAPAGKGQTPSQQSRNSVTFTKAEDGSQIVPDDEESRGNQTYMQRQFSSMLQPGV
NKFSLRMFGSQKAVEKEQERVKSAGNWIIHPYSDFRFYWDFTMLMFMVGNLIIIPVGITF
FKDETTIPWIIFNVVSDTFFLMDLVLNFRTGIVFEDNTEIILDPKKIKEKYLKSWFVVDF
VSSIPVDYIFLIVERGMDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFH
MTYDLASAVMRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVSLNKMVNDTWTELYS
FALFKAMSHMLCIGYGRQAPESMSDIWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQ
YQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEESILEELNEPLREEIVNFNC
RKLVASMPLFANADPNFVTAMLTKLRFEVFQPVDYIIREGTIGKKMYFIQHGVVSVLTKG
SIGMKLMDGSYFGEICLLTRGRRTASVRSDTYCRLYSLSVDNFNEVLEEYPMMRRAFETV
AIDRLDRIGKKNSVLMHKVQHDLNSGVFNNRENEMIQEIVKYDREMVQQVDVPRSRAMSM
TPPLYSEGVFNPPGSSTHPHNSAIATLQQAVAMNFCAPMQGNLMGVGNLQSPKMVRRFQV
MESVPSPVSASPLQSQFIASGAFAPIQSSPPVQSPLTLGGRSFQYGSSALAGPTSGSQLS
LAQQHIASPAHRPSTYKSTHSLQLGSLSQDARALSASQPSLPHEGGQTGAPSPPQSTRVS
STSIGPPQTPSGHTGIRSAIPPKVVLPHQMSVGAIPVASLPGSVQSFGAGAGMAVGGAGT
GVGDSGRPKKDSIVSLPETDHIRVRSRLSSNL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggcggaggacggcgatgaggagcccaaattccagcagcctcgaccacctcaa
gtaaccagcttgtccggacgcgcggatcatatgagcagcggaggaaccaagatgaagaga
tttacgccaggaggcggagccgcgtccattgcgcgtaaaaactccaacatcaatgagctg
tggctcctgcaagacgaggactccgcacctgtccgtgccagtggcaacacggcctccgct
ctgttgtgccggagggatgctactggaggggacacagtcccagaggcaggcgtgatagca
cagggagccatcggtatgatatgcaacaaaaacggagattgtagaagggacccggccagt
tcagggagcctctcttctctcatctcaaggcaggagatgcagacagatggagtagtagct
gctgaagacggaaaggggcaggctgcaagcatggacggctctatcacttcagcggggtct
ctgacacaggggccgggcgccgagttcaagaccgcggcagcgatggagaaaaaagactcc
agagtttccttctccaacgccccagctggtaaaggacagactccgagtcagcagtcgaga
aattctgtcacatttaccaaagctgaggatggctctcagatagtgccggatgatgaagaa
tccagggggaatcagacatacatgcagcggcagtttagttccatgcttcagcccggagtt
aacaaattctccctgcgcatgtttggcagccagaaggcagtggagaaagaacaagagcgc
gtaaagtcagcgggtaattggattatccacccatacagcgacttcaggttctactgggac
ttcaccatgctgatgttcatggtgggcaacctgatcatcatccccgtgggcatcaccttc
ttcaaggacgagaccaccattccctggatcatcttcaacgtggtttctgacaccttcttc
ctcatggacctggtgctgaacttcaggaccggcatcgtgttcgaggacaacaccgagatc
atcctcgatcccaagaagattaaggagaagtacttgaagagctggttcgtggtggacttc
gtctcttccatacctgtggattatatcttcctcatcgtggagagagggatggactcggag
gtgtacaaaacagcccgggcgctccgcattgtccgcttcaccaagatcctcagtctgctg
cggctgttgaggctgtccagactcatccgttacatccaccaatgggaggagatcttccac
atgacctatgacctggccagtgctgtgatgcgaatattcaacctgattggtatgatgctg
ctgctctgtcactgggatggctgtctccagttccttgttcccatgctgcaggactttccg
tctgactgctgggtttccctcaacaagatggtgaacgacacatggaccgagctctactcc
ttcgccctctttaaggccatgagccacatgctgtgcattggatatggtagacaagcccca
gagagcatgtcggacatctggctgaccatgctcagtatgatcgtcggagccacctgttac
gccatgttcatcggccacgcaaccgcactcatccagtctctggactcgtccagacggcaa
taccaagaaaagtataaacaagtggagcagtacatgtcgttccacaaactaccggccgac
ttccgacagaaaatccatgactactacgagcacagataccagggaaagatgtttgacgaa
gagagcatcctggaggagcttaatgagcctctgcgcgaggaaatcgtcaacttcaactgc
cgtaagctggtggcctccatgccgctgtttgccaacgctgatcccaactttgtgacagcc
atgctgaccaaactgaggtttgaagtcttccagcctgtagactacatcatcagagaggga
accatcggcaagaagatgtacttcatccagcacggggtggtcagcgtcctgaccaaagga
agcattggcatgaagctgatggacggctcctactttggagagatctgcctactgacccgt
ggcagacggacggccagtgtgcggtcagacacctactgtcgcctgtactctctctctgtg
gacaactttaatgaggtgctggaggagtatcccatgatgaggagggcctttgagacggta
gccattgacagattggacaggataggcaagaagaactccgtcctgatgcacaaagttcag
catgatctgaactcgggtgttttcaacaaccgggagaacgagatgatccaggagatagtt
aaatatgatcgagaaatggttcaacaggtcgatgtaccacgttcgcgggccatgtccatg
acacctcctctatacagtgaaggagtctttaatcctccaggttcctccacccatccccat
aattccgcaattgccactctgcagcaggctgtagccatgaacttttgtgcccccatgcaa
gggaacttgatgggagtagggaacctgcagtccccaaagatggtgaggagattccaggtg
atggaaagtgtgcccagccctgtttcagcttctccactgcagtctcagttcattgcttct
ggtgcctttgctcccatccagtcgagcccccctgtccagagcccgctgacacttggagga
cgatcattccagtatggatccagtgccctggctggtcccacctcaggctcccagctttct
ctagcccagcagcacatagccagccccgcacaccggcccagcacatataagagtactcat
tccttgcaattgggtagtttgagccaagacgccagggcactgtcagcctctcagccctca
ctgcctcatgagggggggcaaacaggtgcccctagtcccccccagtctacaagagtctcc
tctacttccattggaccccctcagaccccatcaggtcacacaggcatccggagcgctata
ccacctaaggtggtactgccccaccagatgtctgtgggggccatccctgtagcatccctg
cctggttctgtgcagagttttggggctggtgcagggatggcagtagggggtgcaggaaca
ggtgtgggggactcgggacgacccaagaaggactctatagtgagccttcctgagacagac
cacatcagagtcagatccaggctatcctcaaacttgtga
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