Sander lucioperca (pikeperch): 116063281
Help
Entry
116063281 CDS
T07345
Symbol
si:dkey-183n20.15
Name
(RefSeq) RING-HC_RNF170 domain-containing protein isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116063281 (si:dkey-183n20.15)
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116063281 (si:dkey-183n20.15)
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116063281 (si:dkey-183n20.15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_5
zf-C3HC4_2
zf-RING_2
TRAF3_RING
Prok-RING_4
zf-4CXXC_R1
Motif
Other DBs
NCBI-GeneID:
116063281
NCBI-ProteinID:
XP_031174042
Ensembl:
ENSSLUG00000005331
LinkDB
All DBs
Position
11:complement(35707830..35715604)
Genome browser
AA seq
259 aa
AA seq
DB search
MHPYHSSQSRLDHLHSEGPVGHGHLGSSTSLLLCTPEHSASMLMSRYKESTQSCPSTSRD
WHCPVCLQTASFPVQTNCGHLFCAPCLIAYWRHGSWLDAISCPLCRQKVSVLCNLFNESR
SDRQSKEVLGEITDYNKRYSGAPRRVTDYLCDTPLLLQLLARGLGTMRGLVWLFFFRVAL
CCVGTVLSISYPPLDTTSSSANLLETDPSLCGLLGVLDDLVVVILLLICIININQQMAPE
SGGHNANATTSQGVLGNSL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcacccctaccacagctctcagtccagactggaccatctccactctgaaggtccagtt
ggtcatggccacctcgggtcatccacatctctgctgctgtgcacgcccgagcattcagca
tcaatgttaatgagccgctacaaggaatctacacagtcatgtccatccacaagccgagac
tggcattgtccagtctgtttgcagacggccagcttcccagtccagacgaactgcggccat
ttgttctgtgctccctgtctgatcgcctactggagacatgggtcctggttggatgcaatc
agctgcccgctctgcagacagaaggtcagcgtgctgtgcaacctatttaacgagagtcgg
tcagaccgccagtcaaaggaagttcttggggaaatcacagactacaacaaacgttattct
ggagccccgcgaagggtaacagactacctatgtgacacgccccttctcctgcagttactg
gcccgcggcctgggcaccatgagaggactcgtgtggttgtttttcttcagggtggccttg
tgctgtgtggggaccgtgctgtccatctcctaccctcctctggacactacctcctcatca
gcaaatctgctggaaacagacccctccctatgtggactgctgggggtcctagatgacctg
gtggtggtcatcctgctccttatctgcattatcaacatcaaccagcaaatggcgccagag
agcggaggacacaatgcaaatgctacaacctcacaaggagtactggggaattcactgtag
DBGET
integrated database retrieval system
