Sander lucioperca (pikeperch): 116063313
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Entry
116063313 CDS
T07345
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03320
PPAR signaling pathway
sluc04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
116063313 (rxrgb)
03320 PPAR signaling pathway
116063313 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116063313 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sluc03310
]
116063313 (rxrgb)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
116063313 (rxrgb)
Nuclear receptors [BR:
sluc03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
116063313 (rxrgb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
116063313
NCBI-ProteinID:
XP_031174098
Ensembl:
ENSSLUG00000016849
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All DBs
Position
2:2445891..2481448
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AA seq
467 aa
AA seq
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MWHPMSSPATGGSPAREIGYGHYSGPMTHTHSPPMGGMVGHPSVISTSRPLLSPMSGLGS
PMNGLASPYPVITSSLGSPSISLPSTPNMNFGPLGSPQMNSMNSVSSSEDIKPPPGLQNL
GNINYQCTSPGGMSKHICSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDMKEC
LIDKRQRNRCQYCRYQKCLAMGMKREGVCAAVQEERQRGRERGENEVESTSSFNEEMPVD
KILDAELAVEPKTETSYSDGSPSNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVS
KMKDMQMDKTELGCLRAIVLFNPDAKGLSSPPEVEALREKVYASLESYTKQKYPDQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaccccatgtcatcacctgcaactggaggcagccctgcgagggagataggttat
ggccactactcggggccaatgacccacactcactctcctcccatgggcggcatggtcggc
cacccgtcagtcatcagcacctccaggcccttactgtcccccatgtccggcttgggctcg
ccaatgaatggcctggcctcaccctaccctgtcattacatcttctctgggctcgccctct
atatcattgccgtccacacccaacatgaactttggaccactcggcagtccacagatgaac
tctatgaacagtgttagcagctcggaggacatcaagcctccgccgggcctacagaacctg
ggaaacatcaactaccagtgtacgagccccgggggaatgtcaaagcacatctgctccatt
tgtggggaccgctcctcaggaaagcactacggtgtgtacagctgtgagggatgcaaaggc
ttcttcaagaggactgtacgtaaagatcttacctacacgtgtcgagacatgaaggagtgc
ctgattgacaagcgccagcgaaaccgctgccaatactgtcgctaccagaagtgcctggcc
atgggcatgaagagagaaggtgtgtgtgcagcggtacaggaagagaggcagcgtggaagg
gagcgaggggagaacgaggtggaatctaccagcagtttcaacgaggaaatgcccgtggac
aagatcctggatgctgagctggctgtggagcccaaaacagagacgtcgtacagcgacggc
agccccagcaactcaaccaacgaccctgttaccaatatctgccaagcagcagacaagcag
ctcttcaccttggtggagtgggccaaaaggatcccacacttctccgaactccccctggat
gaccaggtcatcctactacgagcaggctggaacgagcttcttattgcatcattctcgcat
cgctcagtcacggtaaaagatggcatcctgttggcgacaggcctccacgtccacagaagc
agcgcccatagtgctggagtgggctccatctttgatagagtcctgacagagttggtatcc
aaaatgaaagatatgcaaatggataagacagagcttggctgcctgcgagccatcgtcctc
ttcaacccagatgcaaaaggtctttcaagcccacccgaggtcgaggcgctgagggaaaaa
gtttacgcctcattggagtcgtacacaaaacagaaatacccagaccagcctggcaggttt
gccaagctgctgctccgcctgcccgccctgcgctccatcggcctcaagtgtctggagcat
ctgttcttcttcaagctgatcggggacacgcctatcgacaccttcctgatggagatgctg
gaggctccacatcagattacatga
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