Sander lucioperca (pikeperch): 116063449
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Entry
116063449 CDS
T07345
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116063449 (lingo3a)
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
116063449 (lingo3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_9
LRRNT
V-set
Cupin_1
LRR_RPS2
Ig_C17orf99
LRR_6
Motif
Other DBs
NCBI-GeneID:
116063449
NCBI-ProteinID:
XP_031174303
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Position
11:complement(37914396..37961343)
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AA seq
610 aa
AA seq
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MGLSLGQDVDWLLPFLFLLLMVTVLPTQGQGCPQRCECISKVKTVSCYGRRLSALPDDIP
LDTKTLDLSGNKLRWVEHGDLLPYSRLEKLDLSENIISVLEPNAFSSLQNLQSLSLRGNQ
LKLVPMGAFSRLANLTSLDLSGNKIVILLDFTFQDLKSLKNLEVGDNDLVYISNKAFLGL
VGLRELTIERCNLTSVSSQSLSYLHNLVALRLRYLSISTLEDQNFRKLGNLRGLEIDHWP
FLEHISPHSLQGLNLSWLSITHTNITSVPTSALRSLAHLTSLNLSYNPISVLESWALRDL
VRLKELHLVNTNLVAVQPYALGGLRQISLLNLSTNNLVSLEEGAFQSVNTLETLRLDGNP
LACDCRLLWILQRRKTLNFESASPVCMTPVEVQGRALNAFSDSALFDHFTCQKPKIRNRK
LQQVTAREGQVVSFICKAEGEPTPVIFWISPQRRRITTKSSGRLTVLPEGTLEIRYAQVT
DSGTYICIASNAGGNDTYFATLTVSGLPLDAALMANRTYYAGDLNDTNLNDTRVFLKFTL
DLKTILISTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQG
GARKFNMKMI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggggttgagcctgggccaggatgtagactggctcctgcctttcctgttcttgctactg
atggtcacagtgttacccacgcagggtcaaggatgtccacagcgttgtgagtgcatttca
aaagtcaagactgtgtcctgttatggtagacgcctgtccgcactgccagatgacatccca
ctggacaccaagaccctggacctaagtgggaataaacttcgctgggtagagcatggggac
cttcttccatattcacgtcttgaaaagctggacctgagtgagaacattatcagtgtcctg
gaaccgaatgctttttctagtctccagaacctgcagtcgctttcactgaggggtaaccaa
ttgaaactggtccccatgggtgctttctcacgtctcgccaatctaacttcattggacctc
agtgggaataagattgtaattcttttggactttactttccaagacctgaaaagtctgaaa
aacctggaagttggagacaatgatttagtttacatttccaacaaggcctttctgggtctg
gttgggctgagggagctgaccattgagaggtgcaacctgacttctgtgtccagccagtct
ttgtcttacctgcataatctggtggctctgcgtctccgctacctcagtatctccacctta
gaggaccagaacttccgtaagctgggaaacctgaggggtctcgagatcgatcactggccc
tttttggagcacatttcccctcacagcctgcagggtctaaacttgtcttggctgtcgatt
actcacactaacatcacctctgtgcccacctctgccctacgcagtctggctcacctcacc
agcctcaacctctcctacaaccctatctcagtgttggagtcctgggcgctgcgggacctt
gtaaggctgaaggagctgcatctggtcaacacaaatctggtggcagtgcagccatatgcg
ctgggtggcctgaggcaaatcagcctccttaacctctccactaacaacctggtgtccctg
gaagagggagcgtttcagtctgtcaacactctggagacgctgcgtttggacgggaaccct
ctggcctgcgattgccgcttgctgtggatccttcagcgcaggaagaccctcaatttcgaa
agcgcctccccagtgtgtatgacgcccgtcgaggtgcagggacgggctctgaatgctttc
tctgactcagctctctttgatcactttacttgccagaagcccaaaatccgcaacaggaag
ctacagcaggtaactgcccgcgaggggcaggttgtgtcattcatttgcaaagcagaaggt
gagccgacgccggtgatattctggatctctcctcaacgccgccgcatcacaacaaagagt
agcggccgcctaactgtgttaccagagggcacattagaaatacggtacgcccaggtaaca
gacagtggaacctacatctgcatagccagcaatgctggtggaaatgacacctattttgcc
acacttacagtcagtgggctgccactagatgcagccctaatggcaaaccgcacatactat
gctggagaccttaatgacacgaatctgaacgacaccagagtcttcctaaaatttactctg
gacctcaagaccatccttatatccacagctatgggctgtatcatgttcctgggggtggtt
ctcttctgtttcattctgctctttgtgtggagtcgagggagagggcagcacaagaacaat
ttctcagtggagtattccttcagaaaggtggatggacccgctgccagtggaggacagggt
ggggcccgcaagttcaacatgaaaatgatttga
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