Sander lucioperca (pikeperch): 116063499
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Entry
116063499 CDS
T07345
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116063499 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sluc03310
]
116063499 (rorca)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116063499 (rorca)
Nuclear receptors [BR:
sluc03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
116063499 (rorca)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116063499
NCBI-ProteinID:
XP_031174354
Ensembl:
ENSSLUG00000007521
LinkDB
All DBs
Position
11:38734581..38752384
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AA seq
474 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQECAGLSVREENGNMAD
HCRTYRRGSSTKLSDLDDISLLPEGLLLDLPLTPEDGCSEYCNLDMMGGSGGSSSSSQSS
PEQTNFDFVDAHHSIKHEYQLLHDSGLFSHAILNPLPEGCSLLEIERITQSVLKSHIETS
QYSTEELKRMAWTLYSPEETSSYQTKTAEVMWQQCAVHITNAIQYVVEFAKPITGFMDLC
QNDQIILLKAGCMNVLLIRMCRAYNPINNTLLFDGKFATADLFKALGCDDLVNAVFDLAK
SLSRIQMSEEEMALFSAVVLLSPDRPWLTDVQKIQKLQEKVYLALQRCLQKEGASEEKLA
KMVSKLPILKSICNLHIDKLEFFRLVHPETAYTFPPLYREVFGSEISFPDSTEG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaggtgattccgtgtaaaatctgtggggacaaatcatcagggatt
cactatggtgtcatcacctgtgaaggctgcaagggtttcttccgacgcagccagcagaac
aatgctatgtattcctgctcacgacagaggaattgtttaatcgaccggaccaaccgtaac
cgttgtcagcactgcaggctgcagaagtgtctcgcgctgggcatgagccgtgatgcggtc
aagtttggtcgaatgtccaaaaagcagcgcgacagcctgtatgcagaggtccagaagcac
cagcagtcccaagagtgtgcggggctcagtgtccgcgaggagaatggcaacatggccgac
cactgccgcacttacagaagaggctccagcaccaagctcagcgacctggatgacatcagc
ttgctgccagaaggcttgcttttagatctgccgctgaccccagaggatggatgtagcgag
tactgtaacctggacatgatgggtggcagtggaggcagcagctcatcctctcagagttca
ccagaacagaccaacttcgactttgtagacgcccaccacagcatcaagcatgagtaccag
ctgttgcacgactctggactcttctcacatgctatcctcaacccgctgcccgagggctgc
tccctgcttgagatagagcgtataactcagagtgtgctgaagtcccatatagagacgagc
cagtacagcacagaggagctaaagagaatggcgtggaccttgtatagcccggaggagaca
agctcataccagaccaagacagctgaggtgatgtggcaacaatgtgccgttcacatcacc
aatgcaatccagtatgtggtagagtttgccaagcccatcactggcttcatggacctctgc
cagaatgatcagattatcctcctcaaagcaggttgcatgaatgttcttctgatccgtatg
tgtcgggcctataaccccatcaataatacattgctctttgatggaaagtttgccactgct
gatcttttcaaagcccttggctgtgacgatcttgtgaatgcagtgtttgacttagctaaa
agcctgagccgtatacagatgtccgaggaagagatggctctcttcagtgctgttgtgctg
ctttcaccagaccgaccctggctgacagatgttcagaagatacagaagttgcaggagaaa
gtctacttggctctgcagcgctgcctacaaaaagagggagcatcagaagagaaactagcc
aagatggtgtctaagcttcccatcctgaagtccatttgcaaccttcacatcgacaaactg
gagtttttccgtctggtccaccctgagacagcatatacctttcctcctctgtatcgggag
gtttttggcagtgaaatctccttcccagactccacagagggctaa
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