Sander lucioperca (pikeperch): 116063813
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Entry
116063813 CDS
T07345
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
sluc
Sander lucioperca (pikeperch)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SH3_2
Ank_5
SAM_2
PDZ_6
PDZ
SH3_9
FERM_f0
SH3_1
Motif
Other DBs
NCBI-GeneID:
116063813
NCBI-ProteinID:
XP_031174629
LinkDB
All DBs
Position
21:complement(23993954..24090413)
Genome browser
AA seq
2454 aa
AA seq
DB search
MTMPFSPLSSDEEQQRMLGNNRHLYPGAEDEEEEEEEEMEEEERDEDQEEEEENGELEGE
EEDDEEEMVEEVRRGGLSRGGRGEGHRQSGKLAGRPTGDRQVRPGNPGHTTNPYSSNPGP
TNQQPANHIQQQQQQRRLKERSTGTVQSEDTHIAMMVFRIGIPDIKQTKCLRFNPDATVW
KAKQQVLCSLTESLRDVLNYGLFQPATDGHDAKFLEEERLLKEYPQSFEKGVPYLEFRYK
TRVYKQTNLDEKQLAKLHTKASLKKFMDYIQTSAVDKMVKFLDKGLDPNFQDADTGETAL
SLAVQCEPGGGEAIRVLVEGGAHIDFRAKDGLTPLHKAVRGHRHTALLVLLSLGASPDYK
DRRGLTPLYHTVLTGGDTSCCETLLFHRAKLGIRDENGWDETHQACQHGNSQHLEHLLFY
GADSSSQNASGNTALHICALYNKESCSRILLYRGANKDTKNSSGQTPFQVAVMSGHFELG
EIIKNHRDTDVVPFVESPKYAPQRRESTRTLTIPNPHPFLRANSDSSMNLPDWMAVPNAP
GTNIVSVQGYKHTGTLRSSSSPRGARTRSPSRGRIGDKEDRSRQSRRQGPVPASAAGQNA
GQRRRLYSAVPGRVFVATRSNSAQGEREISFSKGDRVKVLSVGEGGYWEGTVRGRTGWFP
SDCVEEVMLRSQDNRSESRGERAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKKDSEG
FGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKV
GHRQVVNMIRQGGNSLMVKVVMVTRNPDMEEGSRKKIPQQSKRLSTPAIALRSKSMTSEL
EEMVERAATPWKKKSEFESSQVTEKKRTVYQMALNKLDEILAAAQQTISTNEAPGTRGQG
PKRDRGRSFYGNEPNYGDHSGMGMMSSGLGLGYDRGQYTSGHGPPHGMLRQKSIGVPEEE
RQYLHPPAMKFARSLSVPGPDEIPPPPTTAPPDPPFSSAPPLGWRAKSSQQPSVSVSQST
STSAHYQPYSQSVHFTHGGRERAGGPSTGPSDGAVDNTTSYAHAAAHTAQSRTASRKVAY
TGESVGAGIGASGGTKAAGLRRGYSTAVPPSSIATVMPQQQQTTQSQPQRADRSAAGAGA
GGPKGGARRGKGPLVKQSKVEDLRMAQGTMGGKGSVEKSSIPIPTIIVKAPSTSSSGRSS
QGSSVEADAPTSGETDEAKTPHGPPSTPAPQPPSPPSIPAPPPPSLPSMRAQDNLDFTSQ
FGAAIVGAARRDRERFHEARRKSASLFMSVEEDVSLGGVSDGITRTQVSQQQLNTQGESS
STRLRPSKSIDEGMFSGDTFIHHTRSMPPAFGLPEYSSPALDYQPKSVPTDLYTAAGRQP
GPSSTTTFIHPLTGKALDPTSPLGLALAARERALRDDSRLRRGTEHHFTRQMSSGMFPSS
TVTSQPVSSTAQSSSSSYLVTSSSLAATTATVGRPPSPRILRGVGSVWSEEGGGGERERE
GGGAREGLRVRFSEDKTVHTHHYQSQPYQPTYKERERDRSRERERELSRERERDKEREGY
MRRAEQAAANAAAADSSAQQASQSQQPRRPTFLRMESQADAYILSLTPPSPPPTSTQQTA
NTTGSTGTGIMVLPPPAPSVDADDEFVYADPLPPPLQFANSFDRGISGYSQHGMRPNSLT
SRQQQVPPPPPPPPPPPPPPPPPQKESFVSGFPAHTPLPSPQAGDSTASSLTSYDSEVAN
LTQSVTSPSQTSPNPPPPHSPSTLQPTSTAGPPPPPSVSPPPPPGSYHRPFSMSHPHHLY
NSSHTPGRSSPTPPPHTVAPPPAYRGHPAPSSIAATSAPLRGTASHATTASCAATTTAAA
TTTNTSTQLYHERTHTTHTTSSTAITGSRRTGEHHRPPPATKKGESQETVVDSGIEELDS
RSSSDHHLDSILASVRGDRLDRGERGGRMGGGTGEPERGGDFLESYMSYLDGQTFEMQNA
TAAASTYPKTNRFREGGRTSDLHRQTSTAPASFHSHRRRDEQEEDEVEEGVDESGRDGYG
VRDVQNLGRPISPYFDRPRTPEMKPLWGEGQMAGDQSGSLLEGKKIYPPASSMKPSIINE
LSSKLQQRTKDSWSSQRPLGRHRSRNRFSEDSASALSPPSARSLSPSPISLSQPSLAPSP
TPASQYPNWGRSPSPQPQPPAACQPPRSHSPLSPTSYAPYPTSPKHRPVYRTKALEFQFI
PSRDSRKAESHMLQRRRAPSPLISPSERPKLGPPRPSSLPLLPTTPLYSAMYDLRGSITP
PSPGNPLGDPYFSPSPPLFAPSGAPPPPNSTLVVSRSLSPTHFLSGTSSPPLHPHPPPTC
LSYPHLPPPSPTKPFASKPLPYWTKYDVADWLGYLNLGEHRERFLDNEIDGTHLPSLTKD
DYLDLGVTRVGHRMNIERALRAVMDRMSSSPFPISVLSPRDGQTERRRDDGSRS
NT seq
7365 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccattcagccccctgtccagcgacgaggagcaacaaaggatgctgggaaac
aatcgacatctctatccaggggcagaggacgaggaagaagaggaagaggaagaaatggaa
gaagaggagcgtgatgaggaccaggaggaggaggaagagaatggcgagctggagggggaa
gaggaagacgatgaggaggagatggtggaggaggtcaggcgaggaggcctgtcgcggggg
ggcaggggtgagggacacaggcagtcaggtaaactggccggaagacccactggggacaga
caggtccgtccagggaaccctggacataccacaaacccctattcgtccaatcctggaccc
acgaaccaacagccagccaatcacatacagcagcagcagcagcagcggaggctgaaggag
cgcagcacaggcactgtgcaatctgaggacacccacattgccatgatggtgtttcgcatc
ggtatcccagacataaagcaaacgaaatgtttgcggtttaacccagatgccactgtgtgg
aaggccaagcagcaggtgctctgctccctgaccgaatctcttcgggacgtcctgaactac
ggtctgttccagcccgccacggacggccatgatgccaagttcctggaggaggagaggctg
ctcaaagagtacccacagtcctttgagaaaggggtaccgtatttagagtttcgatacaag
accagggtatacaaacagaccaatctggatgagaagcaactggccaaactgcacactaag
gctagcctgaagaaattcatggattatatccaaaccagcgctgtggacaagatggtcaag
ttcttagacaaaggcctcgatcccaactttcaggacgctgacaccggtgagactgctctg
tcgctggcggtgcagtgtgagccgggtggaggtgaggccatccgggtcctggtggaggga
ggggctcacattgacttccgcgccaaagatggactcacaccgttacacaaagctgtgcga
ggccaccgccatacagccctgctggtcctgctgtctctgggtgcatctccggactacaag
gaccggcgagggctgacgccgctctatcacactgtgctgacagggggggacacctcctgc
tgtgaaacactgcttttccatcgcgccaaactgggcatcagggacgagaatggctgggac
gagacacatcaggcctgtcagcatggtaactcgcagcatctggagcacctccttttctac
ggggctgattcttcctcccagaatgcctctggaaacactgccttgcacatctgtgcttta
tacaacaaggaaagctgttcacgaattctgctctaccggggagcaaataaagacacaaag
aacagcagtgggcaaaccccctttcaggtggctgttatgtctggccattttgagctggga
gaaattatcaaaaaccaccgggatacagatgtggttccctttgtggagtctccaaagtat
gccccccagaggcgggagagcacccggacactgacgatacccaaccctcatcccttcctc
cgggccaacagtgacagcagcatgaacctgccagactggatggcggtgcccaacgcccca
gggaccaatattgtctctgtgcagggatacaaacatacaggaaccctgcgcagctccagc
agtcccagaggggcaaggacgcgttccccgtcccgtggaaggatcggagacaaggaggac
aggagccggcagagtcggagacaggggcccgtccctgccagtgcagctggacaaaacgca
ggccagcggagacgcctctacagcgctgtcccgggacgagtctttgtagctactcgatca
aactctgcccaaggagagcgagaaatcagcttcagtaaaggagacagggtcaaagtgttg
agtgttggcgagggcgggtactgggaggggacggtcagaggtcgcacaggctggttcccc
tctgactgtgtggaggaagtaatgcttcgaagccaagacaaccgatcagagagtcgggga
gaacgagccaaaaggctgttccgccattacactgtgggatcctatgacagctttgacgct
cctagtgactatataatcaaggagaagacagtgcttctgcagaaaaaagacagtgagggt
tttggctttgtgctgagaggagccaaagctcagactcctatcgaggagtttacccccacc
ccggctttccctgccctgcagtacctggagtcagtggacgagggaggcgtcgcctggaga
gccggtctcaggatgggggatttcctgatagaggtcaatggtcagaatgtggtgaaggtt
ggtcaccgacaggtcgtcaacatgatccgccaaggtggcaacagcctcatggtcaaggtt
gtcatggtaacccgcaaccctgacatggaggagggttcgaggaagaaaatcccccagcag
agtaagaggctgagcactccggctattgccctacgatccaaatccatgacttcagaactg
gaggagatggtggagagagctgctaccccttggaaaaaaaaatcagaatttgaatcctca
caagttacagagaagaagaggacagtctatcagatggctttgaataaactagatgaaatt
cttgcagcagctcagcagacaatcagcaccaacgaggcgccggggacacggggacagggg
ccaaaaagagacagggggcgaagtttctatggcaatgagccaaactacggggatcattcc
gggatggggatgatgtcgtctgggttgggcctcggctacgaccgtggccagtacacctca
ggtcacggtccaccgcacggtatgctgcggcagaaatccatcggggtgcctgaggaggag
aggcagtacctgcatcctccagccatgaagtttgctcgcagtctgtcggtgcctggccca
gacgaaatccctcctcctcccaccacagctccaccagaccctccattctcctctgctccg
ccactaggttggagagcaaagtcatcccagcagccctctgtctccgtgtcacagtccaca
tccacctctgcacactaccagccctactcccagtcagtgcacttcacacatgggggcagg
gaaagggccggtggtcccagcactggccccagtgatggagcggtggacaacacaacctcg
tatgcacacgcagctgcccatactgctcaaagcaggactgcttcacggaaggttgcgtat
actggggagtctgttggagctggcataggggctagtggagggaccaaggctgcaggtcta
aggagaggctacagcaccgctgtccccccatccagcattgccactgtaatgccccagcaa
caacagactacccagagtcaaccccagcgagcagaccgcagtgcagctggggctggagca
ggcggtcctaaaggaggggcccggagaggcaaaggccccctggtgaagcaatccaaggta
gaggacctgcgcatggcccagggtacaatggggggtaaaggctcggtggagaaaagctcc
attcccataccaaccattatcgtcaaggccccttcaaccagcagcagtggacgcagcagc
cagggcagcagtgtagaggccgacgctcctacatcaggggagacagatgaagccaaaacg
cctcatggtcctccctccactcctgctccacagcccccttctcccccttccatcccagcg
ccgccacctccgtccttgccttctatgcgagcccaggataatctggactttaccagccag
tttggggctgccattgttggcgcagctcgcagagacagggaacggtttcatgaagcccgc
agaaagagtgcctcattgttcatgtctgttgaggaggatgtaagtcttgggggagtgagt
gatggaataacaaggactcaagtgtcacagcaacagcttaacacacagggtgaaagttca
tcaacacggctgcgcccgtccaagtctattgacgagggcatgttctctggggatactttt
atccatcacacccgcagtatgcctccagcctttggcctacctgagtactcctcacctgcc
ctggactatcagcctaagtctgtgcctactgacttgtacacagcagcaggcaggcagcca
ggaccctccagtaccaccacattcattcaccctctaacaggaaaggctcttgaccccacg
tcgccactaggcctcgccctggctgccagagagcgtgctctgagggatgacagcaggtta
aggaggggaacagagcaccactttacccgacagatgtcaagtgggatgtttccttcgtct
actgtcacttctcagcctgtgtcgtcaaccgcccagtcctccagctcttcttacctggtc
acctcgtcttctctggctgctaccacagccactgttggacgcccaccctcacccagaatc
ctcagaggagttgggagtgtgtggagtgaggaaggcggtggaggagagagggagcgggaa
ggaggaggggctcgtgaggggctaagagttcgcttctctgaggacaaaacggtccacaca
caccactaccagtctcagccgtatcagccaacctacaaggagagggagcgggacaggtcg
agggaacgggagagggagctgtcaagagaaagagagagggacaaagagagagagggttac
atgaggagggcagagcaggctgctgccaatgcggcagccgctgatagctctgctcagcag
gcgtcccagtctcagcagcctcggaggcccacttttctcaggatggaaagtcaagctgat
gcctatatcttgtccctcacccctccctctcctccacctaccagtactcagcagacagcg
aacactactgggagcactgggactggtataatggttcttcctccccctgccccctcagtt
gatgcggacgatgagtttgtctacgcagaccctctcccacctccattacagtttgctaac
agcttcgacaggggaatatcagggtactcacaacacgggatgcgccccaacagcctgaca
tcccgccaacagcaggtcccaccccctccacctccacctcctcctccaccaccacccccc
ccaccccctcaaaaagaatcatttgtaagtgggtttcctgctcatacacccctgccctca
cctcaggcaggggactccactgcctccagccttacatcttacgacagtgaggtggctaac
ctgactcagtccgttacctccccctcccaaacgtcgcccaacccccctccccctcactct
ccctctactttgcagcccacctcgacagctggacctccgcctcccccgtcagtctcacca
ccgcctcctcccggatcttatcacagacccttttctatgtcccacccccaccacctctac
aacagctctcacactcctgggcgctcttcccccacgcctcccccgcacacagtcgcacct
cccccggcctaccgtggtcacccagcgccctcctccattgctgccacctctgctccactt
aggggcactgcctcacatgccacgaccgctagctgtgccgctacaaccactgctgctgcc
accacaacaaacacctccactcagctctaccacgagcgcacacataccacacatacaaca
tcctccaccgccatcaccggcagtcgcaggacaggggagcaccatcgtcctccccccgct
actaagaaaggagagtcccaagagacggtggtggactctgggattgaggaactggacagc
cgcagcagcagtgaccaccacctcgacagcatcctggccagtgtccgtggagacaggctg
gaccgaggggagagaggaggacggatgggaggcggaacaggggaaccagaaaggggagga
gattttctggagtcttacatgagctacctggacggacaaacttttgagatgcagaatgcc
acagcagcagcctccacctatccaaaaaccaacaggttcagagaaggaggtcgcaccagt
gatctacacagacagaccagcactgctcctgcatccttccactcacacagacgaagagac
gagcaggaagaggatgaggtcgaggaaggagtggatgaaagtggccgggatgggtatgga
gtgagggacgtgcaaaatttgggacgtcctatttcaccgtactttgatcgccctcgcact
cctgagatgaagcctctatggggcgaggggcagatggccggtgaccagtctgggtcactt
ttagaggggaaaaagatttaccctcctgcatccagtatgaagcccagcatcataaatgag
ctgagcagcaaactgcagcaaagaaccaaggacagctggagcagccagagacctctaggc
agacacagaagcagaaacagattttcagaagactcagcctcagctttgagccccccctca
gctcgatccttgtcaccgtcgccgatttcattatcacaaccatcgttagccccgtccccc
acccctgcctcccagtaccccaactggggacgatccccatctcctcaacctcaacctcca
gctgcttgccagcctccacgttcacattccccactgtctccgacatcttatgccccttac
cccacttcccccaaacacagacctgtctaccggaccaaagccctagaattccagttcatc
cccagtcgcgactcccgtaaagcagaatcacacatgttacagcgtaggcgagcacccagc
cccctcatctccccgtcagagaggccaaagctgggtcccccccggccatcatcccttccg
ctcctccccaccacacctctatacagtgccatgtatgacctccgaggttcaatcaccccg
ccatcacctgggaaccctcttggagatccttacttctcgccctctcctcccctgtttgcc
ccctctggtgcccctcctcctccaaactctactttagttgtctctcgatccctctctcca
actcacttcctgtccgggacctcttctccgcccctgcaccctcaccctccgcctacatgc
ctgagttatccccatctaccgcccccttcccctacaaagccttttgcttccaagccgctg
ccctactggaccaagtatgacgttgcagactggctaggatacctgaacttgggtgagcac
agagagcgtttcctggacaacgagattgacggcacccacctgccctccctaaccaaggac
gactatctggatttgggtgtgacacgtgtaggccaccgcatgaacatagaacgggccctg
agggccgttatggacaggatgtccagcagtccattccccatctctgttctctcacctcgg
gatggacagactgagaggaggagggacgacgggagtcggagctga
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integrated database retrieval system
