KEGG   Sander lucioperca (pikeperch): 116063958
Entry
116063958         CDS       T07345                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116063958
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sluc03041]
    116063958
Spliceosome [BR:sluc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    116063958
 Complex B
    116063958
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Transformer
Other DBs
NCBI-GeneID: 116063958
NCBI-ProteinID: XP_031174855
Ensembl: ENSSLUG00000007858
LinkDB
Position
21:22993437..23014125
AA seq 466 aa
MSDFEEFEKQLSENRQERERERHKKKSRSASPGRGDKHRSWSKDRGSRSREKRSRSRDRK
SRDRRSSSRDHKKHSHSPRRTRKKRTCKYWDVPPPGFEHITPMQYKAMQAAGQIPTIALL
ATSTTTGVAAAPTQVPVVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSQAP
SNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQP
AFHVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGY
AFCEYVDISATDQAVAGLNGMQLGDKKLIVQRASVGAKNTNPTSIIETPVTLQVPGLQRL
QNSGIPTEVLCLLNMVMPEELVDDDDYEEILEDIREECCKYGSVRSIEIPRPVDGVEVPG
CGKIFVEYVSAADCQKAMQALTGRKFANRVVVTKYYDPDMYHRHEF
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgtcggatttcgaggaatttgagaaacagctcagcgagaatcgacaggagagagaaaga
gagagacacaaaaagaagagtcgcagtgcatctcctggccgaggcgacaagcaccgcagc
tggagcaaagaccgaggcagtcgcagccgagagaagagaagccgcagcagggaccggaaa
agccgggaccgccggagctcctcgcgggaccacaagaagcacagccactctccgaggcga
acaaggaagaaaaggacctgcaaatattgggatgtgcctcctcctggttttgaacacatc
acaccaatgcaatataaagctatgcaagcggccgggcagataccaacgatagctctgctg
gcgacgtccaccaccaccggagtggctgcagctccaacacaagtgcccgtagttggcagt
cagatgacgagacaagccagacgcctctatgttggaaatattccctttggagtaactgag
gagtccatggcagagttcttcaacgctcagatgaggcttgcaggactttcacaagcccca
agcaaccctgtactcgctgtgcagattaatcaggataaaaactttgctttcctagagttt
cggtctgtagatgagacgacgcaggcgatggccttcgatggaatcatttttcagggtcaa
tcactgaaaattagacgacctcatgactatcggcctttacctggcatctcagagcagccg
gctttccacgtcccaggcgtcgtctccacagtcgttcccgattccccccacaaactgttt
ataggaggcctgccaaactaccttaacgatgaccaggtaaaggagctcttgacatcgttt
gggcctctcaaagcgttcaatcttgtgaaggacagtgccacttcactgtcaaaaggttac
gccttttgtgaatacgtagacatcagtgccacagaccaggcagttgctgggctcaatggg
atgcaactgggcgacaaaaagctgatagtccaaagggcaagtgtgggagctaaaaacacc
aatcctacctccatcatagagacccctgtgacgctgcaggtccccgggctccaaaggctg
cagaactctggcatacccacagaggtgctgtgccttctcaacatggtgatgcccgaggag
ctggtggacgacgacgactacgaggagatcttggaagacatccgcgaggagtgctgcaag
tacggcagcgtccgctccatcgagatcccccgacctgtcgatggtgtggaagtccccggc
tgtggaaagatctttgtggagtacgtttctgctgcagactgtcagaaagccatgcaagct
ctcaccggccgcaagtttgccaacagagtggtggtcaccaaatactacgatccagacatg
tatcacagacacgagttttga

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