Sander lucioperca (pikeperch): 116063985
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Entry
116063985 CDS
T07345
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116063985 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sluc04515
]
116063985 (lrrc4ba)
Cell adhesion molecules [BR:
sluc04515
]
Immunoglobulin superfamily
NGL family
116063985 (lrrc4ba)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRRNT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
116063985
NCBI-ProteinID:
XP_031174888
Ensembl:
ENSSLUG00000018863
LinkDB
All DBs
Position
21:complement(23849766..23884796)
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AA seq
732 aa
AA seq
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MRIATLTCLPGPSPLLFLLAQLLLRLLLPGPELVGAASSCPSLCTCSNQASRVICTRQNL
EEVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVSVIERNAFDDLKSLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWICNC
DVLWLSWWLKETVPSNTTCCARCHAPPVLKGKYIGELDQSHFTCFAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETVETPGDKESALVAINETFIRVYPGP
TPSGHLWSEGVPTTASSLSAGWSSSSPRATRPTFTVPITEPGFSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGASGRGSGISGGSTVT
QSGSSGIGGGQSLRLHHPEIVNLPNLARSEHLNHYYKTHHFNNNMMGMGMGTGAGLNNNN
NPSSCSQSQNTSISCSQVTTSGGMPTGGTLPSPVPLPQLGLHSSLKGLMGKSQNEPLLFK
SGSKENVQETQI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccttcccccctcctctttctattggcc
cagctgctactgcggctcctcctccctgggccggagttggtgggagccgcttcttcctgc
ccctccctctgcacctgctccaaccaggccagccgagtcatctgcaccaggcagaacctg
gaggaggttcccgaaagcatatcagtcaacacacgatacctcaacctgcaggagaactcc
atacaggttatcaagtccgacactttcaagcacttgagacaccttgagatcctccagctc
tccaagaatcagatccgtcagattgaagtcggagcattcaatggcctccccaacctcaac
acattggagctcttcgacaaccgcctcacactggtgccatcacatgcctttgagtacctc
agcaagctacgggagctgtggctgcgcaacaaccccattgagactctgccaggctatgcc
ttccaccgtgtgccctcgctacgtcgcctggacctgggtgagctcaagaagttggatttc
atctctgatgcagcctttgtgggcctcatcaatctacgctacttgaacctgggcatgtgt
gggctgaaggacattcccaaactgacagcgcttgtgcgtttggaggagctggagctgtca
ggaaaccgactggagatcatccgacctgggtccttccagggcctggtgtctctacgcaag
ctgtggctaatgcactcacaggtgtccgtcattgagcgcaacgccttcgatgacctgaaa
agcctggaagagctcaacctgtcccataactccctgcactccttgccccatgacctcttt
acgcctcttcaccagctggagagggtacacctcaaccacaacccctggatctgcaactgt
gatgtgctttggctaagttggtggttgaaagagacggtgcccagcaacaccacctgctgt
gcccgctgccacgctcccccagtcttaaagggcaagtacattggagaacttgaccagagt
cacttcacctgctttgcgccggtcattgtggaaccacctacagacctcaatgtcaccgag
ggtatggctgctgagctcaagtgtcgcacaagcacctccacaacatctgtcaactggatc
accccgaatggcacactaatgacgcatggttcctaccgggtgcggatatccgtcctgcat
gatggcacactcaacttcacaaatgtcaccctgcgtgatacgggccagtacacctgcatg
gttaccaatgctgctggcaataccacagcaactgctgtcctcaatgtcaccgccgctgat
gccagtgtcaactacacctactttacaacagtcacagtggaaacagtcgagaccccggga
gataaagagtctgcattggtagccatcaatgagacattcatacgtgtttaccctggcccc
actccctcgggccacctgtggtcagaaggtgttcctaccactgcctcctctctgtcagca
ggctggtcctcctcctctcctcgggccacccgacccacgttcactgtgcccatcactgag
ccaggcttctcaggcttggatgatgtgatgaagaccaccaagatcatcattggctgcttc
gtagccattaccttcatggcagcggtgatgcttgtggtgttctacaagctgaggaaacag
caccagctgcataaacaccatggccctgctcgtgctattgagatcataaatgtggaggat
gagctgggggctggggccagtggtcggggcagcggcatctcaggaggctccacggtgacg
cagagcggaagcagtggaataggagggggccagagtctcaggctgcaccacccagagata
gtcaacctgccaaacctggcccgatcagagcacctcaaccactactacaaaacccatcac
ttcaacaacaacatgatgggcatgggcatgggcactggtgcgggcctcaacaacaacaac
aacccctcgtcttgctctcagtctcagaacacatctatatcctgttcccaggtgacaacc
agtggaggaatgcccacaggtggcaccctgccctcccctgtgcccctgccccagttgggt
ctccacagttctctgaaaggccttatggggaaaagccagaatgagcccctgctttttaag
agcggctccaaggaaaatgtgcaagagactcaaatttga
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