Sander lucioperca (pikeperch): 116064284
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Entry
116064284 CDS
T07345
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116064284 (rlim)
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116064284 (rlim)
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116064284 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
116064284
NCBI-ProteinID:
XP_031175233
Ensembl:
ENSSLUG00000019366
LinkDB
All DBs
Position
1:36584196..36594960
Genome browser
AA seq
691 aa
AA seq
DB search
MEGSDSLEQNGSDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELFSRLQQIKDGPEQQNNSTSAPSTESGEDPVEPPENSEDPANGDSLLDWLNTVRRTG
NTTRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQESPQESPEGQE
VVASAEPQVASAEPQVASAEPQVASAEPQVASAEPQVASAEPEVENTEPQVPMETEVVEE
PVVEELAITVEPEPEPELEEVVSQEILGEPPSSPAALPVQPPLSPSPRRGQRRARSRSPE
PRRTRARTARSRSPLNLDQLDGLPNPRHAHSSQGLNSATISPPVSQVEGSSRTRQHVLSR
QSTADSDVQPSRASAETVPEAQNVGSQEGEAAGGEGGAAGRRPPTIMLDLQVRRVRPGEY
RQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAG
LGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDSNRGANTPADLAEALNNPDSATPAA
APVADADEPPLATGVRARTAEADIDEGLASAPPTSGGRARPRPPISLEEPSSLPFLRLAH
FFLLNDDDEDQPQGLTKEQIDNLSMRNFGETDALKTCSVCITEYAEGNKLRKLPCSHEYH
VHCIDRWLSENSTCPICRRAVLISANRESVV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacagtttagagcaaaatggcagtgaccagccagagtcacagcgcagg
aggcagctggaccgcctggacagggaagaggccttctaccagtttgttaacaatctcagt
gatgaggactatcgtctcatgagagacaacaatcttttgggcaccccaggagaggtaaca
gaggatgagctgtttagtagactacagcaaatcaaggatggtccggaacagcagaataac
agtactagtgcccccagtactgaaagtggagaagatccagttgaaccacccgaaaactct
gaggatcctgccaatggggatagtctcttagactggctaaacacagtgaggcgcacaggc
aacacaaccagaaccggtcatcgtggaaaccagtcatggcgggctgtaagccagaccaac
ccaaacagtggcgattttcgctttagcctggaaatcagtgtgaatcgcaacctggctgaa
cagcaggctgctgctgaaggggagcaggagtctccccaggagtctccagagggtcaagaa
gtggtggcaagtgctgaaccacaggtggcaagtgctgaaccacaggtggcaagtgctgaa
ccacaggtggcaagtgctgaaccacaggtggcaagtgctgaaccacaggtggcaagtgct
gaaccagaggtggaaaatactgaaccacaggtacccatggagacggaagtggtagaagaa
ccagttgtagaggaattggctatcacagtggagccagaaccagagcctgaactagaagaa
gttgtttcacaagagattttaggagaacctcccagctcacctgccgccctgccggtacaa
cccccactttctccttcaccacgcagaggacaaagaagagcccgcagccgcagtccagag
ccacgcaggactagggcccgtacagccaggagccgctcccctctcaacctggatcagctg
gatggtctccctaatccacgtcatgctcacagctctcaaggcctgaactctgccaccatt
tctccccctgtgtctcaagtggagggcagttctcggactcgacaacatgttctttctagg
caaagcactgctgacagtgatgttcagccatctagggctagcgcagaaacggtcccagag
gcccaaaatgtgggatctcaagaaggagaagctgctgggggggaagggggtgcagcgggg
cgccgcccccctactattatgcttgatctccaggtgcgtcgtgtgcgtcctggcgaatat
cgccaaagagacagcattgctagccgcacccgctcgcgctcccagaactcaaacaacaca
tttctttatgagagtgagcgtggtggatttcgtaggactttctcacgctctgaacgggct
ggtgtgaggacctacgtcagcactatacgcatccctatccgaagaatctctgatgcaggt
ttgggagaggcaacctcaatggctctccaatctatgattaggcagattatgactggtttt
ggtgaactcggctacctcatggattcagactctgattcttcagattcaaaccgtggtgcc
aacacacctgcggatctggctgaagccctcaacaacccagattctgctactcctgctgcc
gctcctgttgccgatgctgatgaaccacctctggctacaggagttagagcaaggacagca
gaggctgatattgacgagggacttgccagtgctccacctacctctggtggcagggctcga
cctagaccacctatcagcctagaggagcccagctcgctgcccttcctgcggcttgcccac
ttcttcctcctaaatgatgacgatgaggaccagccccaagggctgactaaagagcagatt
gacaacctctcaatgcgcaactttggtgagactgatgccttgaaaacttgcagtgtctgc
ataacagaatatgctgaaggtaacaagctacgtaagctgccctgctctcatgagtaccac
gtgcattgcattgatcgctggctatccgaaaactctacctgccccatctgccgcagggct
gtcttgatatcggccaaccgagagagcgtggtgtag
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