Sander lucioperca (pikeperch): 116064327
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Entry
116064327 CDS
T07345
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116064327 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116064327 (rbm22)
Spliceosome [BR:
sluc03041
]
Complex B
Other components
Prp19-related factors
116064327 (rbm22)
Complex C
116064327 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_12
zf-CCCH_PARP12
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
116064327
NCBI-ProteinID:
XP_031175328
Ensembl:
ENSSLUG00000011807
UniProt:
A0A8C9YJH1
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All DBs
Position
1:35035392..35040762
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AA seq
427 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPKSDVNKEYYTQN
MEREIANSDGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKSITTLYIGGLG
DTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQAAEMAAEKSFNKLIINGRRLTV
KWGRSQAARGKEGIKDGISEMGTRLDPVPGLPGALPPPPALDEEAPANYFNLDPSSSPAV
MNIALPPPPGINPPPPGFGPPMFHPMGHMAPPMPPPMSMRPPGQIHYPSQDPQRMGAHAA
HGSRHGD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatccctaggatccaacacctacaatagacagaactgggaagacgcggatttt
ccaattctgtgtcagacatgtttaggagaaaacccttacatccgtatgaccaaggagaag
tatgggaaagaatgcaagatttgtgctcgaccatttactgtgttccgatggtgtccaggg
acacgaatgcgtttcaagaagacagaggtctgtcagacctgcagtaaaatgaagaatgtt
tgtcagacatgtctgctggacctggagtatggtttgcctatccaggtcagagacactggg
ctgtcggttaaagatgaggttcctaagtcagatgtgaacaaagagtactacacacagaac
atggagagagagatagccaattctgatggaacacggccggtggggcagctaggtaaagct
cccagctctagtgatatgttgctgaaacttgcccggaccactccatactacaagaggaac
cggccacacatctgctccttctgggtgaagggagagtgtaagagaggggaggagtgtccc
tacaggcatgagaagcccacagatcctgatgaccctctggctgaccagaacattaaggac
cgttactatggcatcaatgacccagtggctgacaagctgctaaaacgcgcctcaactatg
ccccgactggacccaccagacgacaagtccatcaccaccctgtacatagggggtttggga
gatactgtcactgatggagatctcaagagtcacttttaccagtttggtgagattcgcacc
attaccatagtccagaggcagcagtgtgccttcatccagtttgccactcggcaggcagct
gaaatggctgctgagaagtccttcaacaaactcatcattaatggacggaggctcactgtc
aagtggggaaggtcacaggcagcaagagggaaggagggcatcaaagatggcatcagtgag
atgggcaccagacttgatcctgtccctggactgcctggagctcttcctccaccaccagct
ttagatgaagaagcacctgcaaactactttaacctggaccctagctcctctcctgcagtc
atgaacattgctctgcccccacctccaggcatcaacccgcctcctccaggtttcggccct
ccaatgtttcaccccatgggtcacatggctccccctatgcccccgccgatgagcatgaga
cctcctggtcaaatccactacccctcccaggatcctcagcgcatgggtgcccacgccgca
catggctcacgtcatggtgattag
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