Sander lucioperca (pikeperch): 116064375
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Entry
116064375 CDS
T07345
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116064375 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116064375 (atrx)
03036 Chromosome and associated proteins [BR:
sluc03036
]
116064375 (atrx)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
116064375 (atrx)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
116064375 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
116064375
NCBI-ProteinID:
XP_031175406
Ensembl:
ENSSLUG00000020556
LinkDB
All DBs
Position
1:36383448..36428073
Genome browser
AA seq
2058 aa
AA seq
DB search
MKGKMSLASSESHLDQMSEKAEEPGSSTETMKPSSSRNKRKPATVAKHTELNESDASVES
ENEGATSDNPSDNNTSSVSKGTLVMRPSGNENKGAMKLRVDFKQKHTDDTLQKKVSCTAC
GKQVNQFQRNSVYEHPALKVLICKSCYKYYTSDDINRDSDGMDEQCRWCAEGGKLICCDY
CNNAFCKKCILRNLGRKELSVITDENSKWHCYVCRSEPLQDLVSKCHRIMEKQELKQRKP
EKNEERESKRHKNKTVKDHKAVVNGKEHTEGSGTMTFSYKKLQVPKELIKKAKKLVETTT
GLNNTFIQFIQQAAEEQGDKSIRYRHLKAFKAVLADLKKAHSALEEALGPEFKNMELQNG
NEGQHIVRKSINIVAHEENDHMDNVADAEDADTEENVDAEQEADITEEADVDEEADIKEE
ADVEEEADVEEEADAADESDKEPLNEQEVNNDQVSGETEMKDNQTKTDSPKKTIKTEECD
DGLASAGEMSLDQDIMSVPPSVPEELFQMVESLADSTMLSQTDTNLVTGADTKSNGNSTA
SQPTQPKVKNLIVKLTPVPVVTTRGSRSSRSKNKEKDGEMQKNCEEKCEKGKDDASDAVD
GTHSPPPSRRSSRLKTTPLRKQAEKKGKEDSSESESEEDKVRAKSSKKSSYAKKEDGEEA
KDSEKKTVDSDSDEVPNILLEKAAAGHSTDEEQGTTSAKKCLFKLNNTSTKDTDKASKRK
RKSESSDSDLENKSKKTSKKKKKKKQNGSDSTNSDSDQEKETKSKAATAKRRSSRVKKQD
EAKEEDRNSPERKATRGRRSYENKRKGRSPKAASKLQSSSSEDEEEQPAEGDSGEDSDEQ
KIKPIVDDNVVGGSGPFHQSSGDEEGDKEKVSQVCEDDDDDDPENRIAKKMLLAQIKSNY
SSGAESSSDNDGADKDEKSSKKVKKEDEDEDEEEEQQDKDSEDSSSDVEVKKRGRRHKLL
RHKLSLSEGESGEEQAASKEKKNKKKKVGSDDSSDSDFEKSEESSEESGISEELSESENE
GKRRKTRSAKKKDQEKPRSYKQKKKRRRIKVQDSSSSNEKSGEDDDDPDGEERKQRKKIR
KILKDDKLRTETRDALKEEEERRKRIAEREALRQKLRETIVVEESSQMNCPITTKLVLDE
DEETKEPLVQVHRNLVTKLKPHQVDGVQFMWDCCCESVKKIEKSPGSGCILAHCMGLGKT
LQVVTLLHTLLLCEKLNFSTALVVCPLNTVLNWLNEFEKWQVGMKDDESLEVSELATVKR
PQDRAYALQRWHDMGGVIIIGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDLVICDEG
HILKNEASAVSKAMNSIRTRRRVVLTGTPLQNNLVEYHCMVNFIKENLLGSVKEFRNRFI
NPIQNGQCADSTLQDVRIMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLSIRVTP
IQCKLYRYYLEHFTGVGNALEGSRGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENRGF
FDEDSMDEFIASETEESSMSMTSDDERTKKKKKQGKGKKKGSDDSDSDDVEVIKEWNTSS
RGRNGEGRVRPEPVEEARPTSSAPGSPNPDWHRDFVTDADAEILEHSGKMLLLFEILRMA
EEVDEKVLVFSQSLISLDLIEDFLELACRAKDEEKVSPYKGEGKWFRNIDYYRLDGSTNA
TTRKKWAEEFNDISNPRGRLFLISTRAGSLGINLVAANRVIIFDASWNPSYDVQSIFRVY
RFGQLRTVYVYRFLAQGTMEEKIYDRQVTKQSLSFRVVDQQQIERHFTTNELAELYTFDP
DLLDGPSEKKSKKATPLLPKDPFLAELLQNNKDQIVCYHEHDSLLDHKEEEALSEEDRKA
AWAEYEAEKKGVSMRTNFQSAYPQMDMGSSNYFSFNMAALASMTNQQLEDLINQGRHKVI
EATNALKTLSRESLEDTIARLWKENPALTENQVQSMALGRQATVELEVKRRELAYRDVLT
RQQTLMMYVQKLITNRKVQEQQMAMANQASYLNQLAMQNGMMGGAGLSQMDLLGLYQQLH
GLNSHQGMGKNPGPSKGL
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtaaaatgagtctggcttcttctgaatcacacctagaccaaatgtcagaaaaa
gcagaggagcctggtagctcaacagaaactatgaagccttcctcttctcgcaacaagagg
aagcctgccactgtagctaagcacactgaactgaatgaatcggatgcctcagtcgagagt
gaaaatgaaggggccacttctgacaacccttcagacaacaacacaagcagtgtatctaaa
ggcactttagtgatgaggccatctgggaatgaaaataaaggcgccatgaagctgagagtg
gattttaaacagaaacatacagatgataccctgcagaagaaagtaagctgcactgcctgt
ggaaaacaagtaaaccagtttcagcggaactctgtgtatgaacatcctgcactcaaagta
cttatctgcaagtcatgctacaagtattacacaagtgatgacatcaatagagactctgat
gggatggatgagcagtgcaggtggtgtgctgaagggggcaagctcatctgctgcgactac
tgcaacaacgccttctgcaagaagtgcatcctgcgcaacctgggcagaaaggagctttca
gtcattactgatgaaaactcaaagtggcactgctatgtctgcaggtcagagcccctccag
gatctggtctccaaatgccaccgcatcatggaaaaacaagaactcaagcaacgaaaaccg
gaaaaaaacgaggaacgtgaaagcaagagacacaagaacaaaacggtcaaagaccacaaa
gcagttgtcaatgggaaagaacataccgaaggttcagggaccatgacattctcttacaaa
aaactgcaggtacccaaggaacttataaagaaagcaaaaaagcttgttgaaacaacaact
ggtctgaacaatacattcatccagttcatccagcaggcagccgaggagcagggagataag
tctatcaggtaccggcatttaaaagccttcaaggctgtgcttgctgatttgaagaaagcc
cacagtgctttggaggaggcgttgggacctgaatttaaaaacatggagttgcagaatggt
aacgaagggcaacatattgtgagaaagagcataaatattgtagcccatgaggaaaacgac
cacatggataatgtggcggatgcagaggatgccgacacagaagagaatgttgacgcagaa
caggaggctgatataacagaggaggctgacgtagacgaggaggctgacataaaagaggaa
gctgacgtagaagaggaggctgacgtagaagaggaggctgacgcagcagacgagtcggac
aaggagccgcttaatgagcaggaggtgaacaatgatcaagtgtcaggtgagactgaaatg
aaagacaaccaaacaaaaactgattcacccaaaaagacaatcaaaacggaagaatgtgat
gatgggcttgcgtcagctggtgaaatgtccctagatcaagacattatgtctgtgcctcct
tcggttcctgaagaactttttcagatggtggagagtcttgcggattccaccatgctttca
cagactgacaccaatttggttacaggcgctgatacaaagtcaaatggaaactcaacagcc
tctcaacccacccagcccaaggtgaagaacctcatagtcaaactgactcctgtaccagtc
gtgacgacacgtgggtccaggtcctctaggtccaaaaacaaagaaaaagacggagagatg
caaaaaaattgtgaagaaaaatgtgagaaggggaaagacgatgcttctgatgcagtagat
gggacacacagcccaccaccaagccgacgctctagtagactgaagaccactcccttgaga
aagcaggctgagaaaaagggcaaggaagactcctcggagtcagagtccgaggaagataag
gtcagggccaaatcttccaagaaatccagttatgccaaaaaagaggatggggaggaggcc
aaagattcagagaaaaagacggtggattctgactcggacgaagttcctaacatactgctg
gagaaagctgcagcaggccacagcacagatgaggaacaggggaccacaagtgctaaaaag
tgtttattcaaactaaacaacacatccacaaaggatacagacaaagcgtccaaacgcaaa
aggaaatctgaaagctctgattcagacttggagaacaaaagtaaaaagacgtccaagaag
aagaagaagaagaaacagaatggctcagactccaccaactccgactctgaccaggagaag
gagacaaagagtaaagcggccacagcgaagaggagatctagccgtgtgaagaaacaagat
gaagcaaaagaggaagacagaaactcacctgagagaaaagcaaccagggggagaaggtct
tatgaaaacaagcgcaagggaaggagccccaaagccgcctccaagctgcagtcatcctcc
agtgaggatgaggaggagcagccggctgaaggtgactccggagaggacagcgacgagcaa
aagatcaaacccattgtggatgataatgtggtcggaggaagtggacctttccatcaatcc
tcaggagatgaagagggcgataaagaaaaagtatctcaggtttgtgaagatgatgacgat
gatgatcctgaaaacaggattgcaaagaaaatgcttctcgcccaaataaaatccaactac
tcttctggagcagagagctcctctgataatgatggagcagataaggacgaaaagtcctcc
aagaaagttaaaaaagaggatgaggatgaagatgaagaagaggagcaacaagacaaggat
tcagaagactctagctctgatgttgaagtgaagaaacgcggcagacgccacaaattgctt
cgtcataaactctcgctgagtgagggtgaatcaggagaggagcaagctgccagtaaagag
aagaagaacaagaagaagaaagtgggcagtgatgactcttcagactcagactttgagaag
tcagaagagtccagtgaagagtcggggataagcgaggagcttagtgaatcagagaacgag
ggaaagcgccgaaagaccagatctgcaaagaagaaggaccaggagaaaccgagaagttac
aagcagaagaagaagcgacgcaggatcaaagttcaggattcctcttccagcaatgagaag
agtggagaggatgatgatgacccagatggagaagaacgcaaacaacgcaaaaagatccgc
aaaatcctgaaggacgacaagctgcggacagagacgagagatgctctaaaagaagaagag
gagaggaggaaacgaatagctgagagagaggcactcaggcagaaacttcgagagacgatt
gtagtggaggagtcttcccagatgaactgtcccatcaccaccaagctggtgctagacgag
gatgaagagaccaaggagccgctggtgcaggtgcacaggaaccttgtcacaaagctcaaa
cctcaccaggttgacggggtgcagttcatgtgggactgttgctgtgaatctgtgaagaag
atcgagaagtctcctggctccggctgcatcctcgcccattgtatgggtctggggaaaact
ctgcaggtggtgacattacttcacactttgctgctttgtgagaagctcaatttctccaca
gcactggtggtttgtcccctgaacactgtccttaattggctcaacgagtttgagaagtgg
caagtaggaatgaaggatgacgagagtttagaggtatctgagctggccacagttaagagg
ccacaggatagagcatacgccctccagcgatggcatgatatgggtggagtaatcatcatc
ggttacgaaatgtaccgaaacctgacacagggcaggaacatcaagagcaagaagctcaaa
gagacctttcagaagacactggtagatccaggtccagacttggtgatctgtgatgaagga
cacatcctaaagaatgaggcgtctgctgtgtccaaagcgatgaattctatcaggacgagg
aggagggttgtgctgactggaacacctctgcaaaacaaccttgttgaataccactgcatg
gtgaacttcatcaaggagaacctgcttgggtcagttaaggagttcaggaaccgcttcatt
aaccccattcagaatggtcagtgtgccgattccacactacaagatgtccggatcatgaag
aaaagggctcacatcctctatgagatgctggccggctgtgtccagaggaaagattacacg
gcactcaccaagttcctgcctcctaaacatgagtatgtgttgtcgatcagagtgacccct
atccagtgtaaactatacagatactacctggagcacttcacaggtgtggggaatgctttg
gaggggagccgtggccgcgcagggaccaaactcttccaggatttccagatgctcagcaga
atctggacccatccctggtgccttcagctggactacatcagtaaagaaaacaggggtttc
tttgacgaggacagtatggatgagttcatcgcttcagaaacagaagaatcctccatgagt
atgacctctgacgatgagaggacgaaaaagaaaaagaagcaagggaagggaaaaaagaaa
gggtctgatgactcggacagtgatgacgtggaggtcatcaaggagtggaacaccagctct
cggggcagaaatggagagggtcgagttagaccagagcctgtagaagaagctcggcccact
agttcagcaccagggagtcccaatcctgactggcacagggactttgtcactgatgctgac
gctgagatcctggagcactctggaaagatgttgctcctctttgagatcctgcgcatggca
gaggaagtagatgaaaaagtgttggtgttcagtcagtctcttatatctctggacctgatc
gaggatttcctggaactggcttgcagagctaaagatgaagaaaaagtctctccatacaaa
ggtgaaggcaagtggttcaggaacattgactactatcgcctggatggctccaccaacgcc
accaccaggaagaagtgggctgaagagtttaatgacatcagtaatccaagaggtcgtttg
ttcctcatttcaacgcgagctggctctcttggcatcaacctggtggcagccaacagggtc
atcatctttgatgcctcatggaacccctcctacgacgtccagagtatcttcagggtctac
cgctttggccagttgaggaccgtctatgtgtacaggttcctagcccagggtacaatggag
gagaagatttatgaccggcaggtaaccaagcagtctctgtcattccgtgtggtggaccag
cagcagattgagaggcacttcacaacgaacgagctggccgagctttacacatttgacccg
gacttgctggatggtccctcagagaagaagagcaagaaagccacgcccttgcttcctaag
gatcccttcctggcagagttgctgcagaacaataaggaccagattgtgtgttaccatgag
cacgactccctgctggaccacaaggaggaggaagccctgagcgaagaggatcgtaaggct
gcctgggccgagtatgaagcagagaaaaagggtgtgtcgatgaggaccaacttccagtct
gcatacccccagatggatatgggctcgtccaactacttctcctttaacatggcggctttg
gcctccatgaccaaccagcagctggaggaccttataaaccagggacgacataaagtcatt
gaagcaacaaatgcattgaagactctatcacgcgagtcactggaagatactatcgccaga
ttgtggaaggagaacccagcactcacagagaatcaggtccagtccatggctctgggacgg
caggccacggtggagctggaggtcaagcgcagggaactcgcgtaccgggacgttctcacc
aggcagcagacgctgatgatgtacgtgcagaagctgatcaccaacaggaaggtgcaggag
cagcagatggccatggctaaccaggccagctacctgaaccagctggccatgcagaacggc
atgatgggaggtgcagggctcagccaaatggacctgctggggctttaccagcagctccac
ggcctaaactcccatcaaggcatgggcaagaatcctgggccctccaagggcctgtag
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integrated database retrieval system
