Sander lucioperca (pikeperch): 116064410
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Entry
116064410 CDS
T07345
Symbol
gabra6a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6a isoform X2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04080
Neuroactive ligand-receptor interaction
sluc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116064410 (gabra6a)
04082 Neuroactive ligand signaling
116064410 (gabra6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116064410 (gabra6a)
Ion channels [BR:
sluc04040
]
Ligand-gated channels
GABA-A
116064410 (gabra6a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
116064410
NCBI-ProteinID:
XP_031175473
Ensembl:
ENSSLUG00000004367
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All DBs
Position
1:complement(36220473..36229326)
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AA seq
446 aa
AA seq
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MAVLTLTLVTFICWISLGSVFGIEKIYSDNITLILDRLLDGYDNRLRPGSGGGVTEVKTD
IFVTSFGPVSDVEMEYTMDMFFRQMWVDERLKFEGPPEVLRLNNRMVDKIWTPDTFFQNS
RKSISHNTTTPNKLFRIMQNGTVLYTMRLTIGAECPMRLMDFPMDAHSCPLRFGSYAYTS
SEILFTWRKGPVASVECPAESMSLLQYDLVGQTLSSEIFKSNTGHYSVQVVHFHLKRKLG
YYLIQTYVPLIMVVVLSQVSFWINKESVPARTVAGITTVLTMTTLSISARQSLPKVAYAT
AMDWFIAVCFAFVASALVEFAAVNYFATLQANRLKKQKARRERFEVLDTGSDDENTISLD
SSHQEDLKRRNHSVCRSEPGEASRVPIFLQQGSAFPQIPQLAGTSPIDKYARILFPLAFA
LFNLVYWYIYLAKDTMEIARNAALKN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcctgacattaactttagttacttttatctgctggataagtcttggtagtgta
tttggaattgagaagatttactcggacaacatcactctcattttggatcgacttttggat
ggttatgacaacagactacgaccaggatctggaggtggtgttacggaggtgaaaacagac
atctttgtcaccagctttggacctgtttcagatgttgagatggaatacaccatggacatg
ttcttccgtcagatgtgggttgatgagcggctaaaatttgagggcccccctgaagtcctg
cgactgaacaaccgcatggtagacaaaatctggacgccagacactttcttccaaaactcc
aggaagtcaatttctcataacacgaccacacctaacaaactcttccgcatcatgcagaac
gggactgtcctctacaccatgaggctaaccattggcgcagagtgtccaatgaggctgatg
gacttccctatggacgctcactcctgtcctctcaggtttggaagctatgcctacacgagc
agtgaaatccttttcacttggaggaagggaccagtagcctctgtcgagtgtcccgctgag
tccatgagtcttctgcaatatgacctggtgggacagactttgtccagtgaaatattcaaa
tcaaacacaggtcactactctgtgcaggtggtccatttccacctcaaacggaagctgggc
tactaccttatacagacttacgttcctcttataatggttgttgtgctgtcacaagtctct
ttttggatcaacaaagagtctgttcctgcacgcacagttgctggcatcaccacagtgctg
accatgaccaccttgagcatcagcgcccgtcagtcacttcccaaagtagcctatgccacc
gccatggactggttcattgctgtgtgttttgcctttgtggcgtcggctctcgttgaattt
gcagcagtaaactactttgccaccctccaggccaaccgtctgaagaagcagaaagctaga
cgagaaaggtttgaggtgttagataccggcagcgatgatgaaaacacaatttcgttggac
agcagccatcaggaagacctgaagaggagaaaccactcagtgtgtcgcagtgagccagga
gaagcttcacgggtgccgattttcctccagcagggctcagcttttcctcaaatcccgcag
ctggctggcaccagccccatcgacaagtacgcccgcatcctcttccccctggcctttgcg
ctcttcaacctagtctactggtacatctacctggccaaggacaccatggagatcgccagg
aacgcggctcttaaaaactga
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