Sander lucioperca (pikeperch): 116064704
Help
Entry
116064704 CDS
T07345
Name
(RefSeq) transcriptional regulator ATRX-like isoform X2
KO
K10779
transcriptional regulator ATRX
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116064704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116064704
03036 Chromosome and associated proteins [BR:
sluc03036
]
116064704
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
116064704
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
116064704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
116064704
NCBI-ProteinID:
XP_031175748
LinkDB
All DBs
Position
13:10658260..10685542
Genome browser
AA seq
1900 aa
AA seq
DB search
MSAAMLSTTSKLNVLVNKLHEYIAHSTPEDSNGTPTSEDADGLTNRSCSVGNSTEHAATK
AGVDTKNSRRKPSVVIKHSGLDESGDSSASEDLDLPVNANGHPDITRLPKGTVLVRPEAV
DNGRDDFRGPEFRSRKSGVLSRRRGGVEHMGIVSCTACGRQVNHFQRDSFYRHPALKVLI
CKSCYKYYLSDDISKDGDGMDEQCRWCAEGGNLICCDFCSNAFCKKCILRNLGRKELSGI
LESKWYCYVCSPEPLFDLVVACDSVLENMEHLWYQQRKKNRVEPEKSELYHMLPHLPQNI
PLDTWDHTGMDGNVVFNYNALQISKNLTKKAKHLVDSTNILNRTFVNFIHTVTTNKQTPA
VRNLYLNSFLSVVKGLRKSLAALEDSLKEEFSDLDVMSCWQKLFSDDFDAQPVTEADADI
SDERCLSDLQKLAAEHLEDYDSDSKGCTDGRTAHACTGENMDSDLNEARQSAQKIGPKPS
ESGFNMTKKLVVKLTPVPMEQGPSSDAPKIETDIHINDKSEVKDVSEDEETGVVGAKADS
KMSNDNSSASLHPEEEQGNRRSPRVKTTPLRRPSDVKAKTPRSAADSDSDSDPEETSSTV
PAKNTEEQSLSRARDDSDSDEVPAALLERAAMTQSSDEPQSDENGGEASTKVAKKCLFWL
TKNTPISPEKMRCKRKMLDRSPESDSSNRRVKSRRESGTDSSSDDVDSQKKIKHLNTLRP
IGKSHLVKREDQDVARKQGSIQAGKSKAKTRRKAMESSSSTSEDEDDDDDDFGSEGSDQK
MKPITEDVALLGAAAFHQSSGDEEQSGPSWAAEEDDDPENRIAKKMLLAEIKANYSSGED
LSSDEETQEDESDSEGEKEFKQGNKDNETDENGEDLTSDSSDTTCDGPNSRHHLLRHKLT
LDEGTPSDKAESDVGKPESKRKASSKHLGSDSESDGDSNESEPEDLGMSEELSQSEDEAG
EDGLKSSRLSSKEKEASRSYEKKIKVPCIWLSDSSSEKSDKEDGDENSDSKGTPKGRKKI
RDIIEDENLRAETQEALREEEERRQRLAERKQQMEDRREIIDGKDELSQVACPITTKLIL
DQDEETKNPLVQVHRNLVTRLKPHQVDGVQFIWDSCCESVKKANSSPGTGCILAHCMGLG
KTLQVVTFLHTVLLSENLKFRRALVVCPLNTILNWVSEFKKWQNNMGKDKVTVTELATKK
HPAERLRALQRWQSDGGVMIMGYEMYRILSQAEKMNEECKKELQSILVDPGPDFVVCDEG
HILRNEVTKISKSLNAIKTQRRVVLTGTPLQNNLNEYHCMVNFIKKNLLGSLNEFRNRFI
NPIQNGQCADSTSRDVRIMKKRAHVLHAMLVGCVQRRDYSELTQFLPPKYEYVLAVRVSP
LQYTLYRYYLDHVTSIGSMTNRATGRIGANLFKDFQVLSRIWTHPWCLQLSFISKENKAY
FEKKRIKAAALLRKEETTVVERGLRENEGKEGNTDDSSTAVIVGKKATISSKSQSLDEGW
FKNLLTEEDAKILEHSGKMVLLFEILRMAEDLNDKVLVFSQSLISLNLIEDFLRTFHHAR
DPSSFKAGSWIKNLDYYRLDGSTSAPLRKKWADQFNNASNDRGRLFLISTRAGSLGINLV
AANRVIIFDASWNPSYDIQSIYRVYRFGQLKQVFVYRFLAQGTMEEKIYDRQVTKQSLSY
RVVDQQQIERHFTLFELTELYVFEPDLLGDPNSKKSKRTTPVLPKDKVLAQLLQTCKDQI
VSFHEHQSLLDHKQEEELSEAERKDAWAEYEAESTNPPPSSSLNSLDTKTNEQLMELLNS
SRANVAEAFMATQRTTSHTIEDYMLRVWQQYPQLPEATVKTKAKIWKVSDEKEKERRQAF
YRDIFAQQQTLTHSIQAILKNRRIQVKQPTVTTVTQPGQT
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagcgatgctgagcactaccagcaagctgaatgtattggtcaacaagctgcac
gagtacatagctcattctactcctgaggacagcaatggcactccaacctcagaggatgct
gatggtctgacaaacaggagctgttctgtgggaaactcaacagagcatgctgcgacaaag
gctggagtggataccaaaaactcaagaagaaaaccatctgttgtcataaagcattctggg
ctcgatgaatctggggattcaagtgcaagtgaggacttggatttaccagtcaacgcaaat
ggtcaccctgatatcactagattgccaaaaggcactgtactggtgaggcctgaagctgtt
gataatggaagagatgacttcaggggtcctgagtttcgcagccggaaatcgggcgtactt
tcgagaagacgtggaggagttgaacacatgggaattgtcagttgcaccgcatgcggccga
caagttaaccacttccagagagattccttttatcgacatccagctctgaaagtacttatt
tgcaagtcttgctacaagtattacttaagtgatgacatcagtaaggatggagatggaatg
gatgagcaatgcagatggtgtgctgaaggaggcaacttgatctgttgtgacttctgtagt
aatgcattctgcaagaagtgtattctaagaaatttaggaaggaaggagctgtctggcatc
ttggagagcaaatggtactgctatgtgtgtagcccggagcccctttttgacctggtggtg
gcctgtgacagtgtcctcgagaacatggagcatctgtggtatcagcagcgcaagaagaac
cgagtagagccggagaaatctgaactttatcacatgttgccacacttacctcaaaacatt
cctttggatacatgggatcacactggtatggatggtaatgtggtgttcaactataacgca
ctgcagatttctaagaatcttaccaaaaaggccaaacatttagtggattcaacaaacatc
ttaaaccggacatttgtcaatttcattcatactgtgacaacaaacaagcaaacacctgct
gttcgcaatctgtacttgaactcctttttgtcagtagttaaaggtttgcgaaaatcactt
gccgcacttgaggatagccttaaggaagaattcagtgacctggatgtcatgagctgttgg
caaaagttatttagtgatgactttgatgcacaacctgtaacagaagcagatgcagatatc
tctgatgaaagatgcttgagtgacttgcagaaattggcagctgaacatttggaagattat
gattctgactccaagggctgcacagatgggagaactgcacatgcctgcactggtgaaaac
atggattcagatttaaatgaagccaggcagagtgcccaaaagattggcccgaagccttct
gaaagcggtttcaacatgactaaaaaactagtagtgaaacttactcctgtaccaatggaa
caggggccatcctctgatgctccgaagatagagacggacatccacataaacgataagtca
gaggtaaaggatgtatcagaagatgaagagacaggtgttgtaggtgctaaagctgacagc
aagatgagcaacgacaactctagtgcatctctacacccagaagaggaacaaggcaataga
cgatctcctcgtgtgaagacaacacctttgcgtcgaccaagtgatgtcaaggccaaaaca
cctcgttctgcagcagacagtgacagtgactctgaccccgaggaaacctccagcacagta
ccagccaaaaacacagaagaacaaagtctgagcagagcaagagacgactctgactcagat
gaagtccctgcagctctgcttgagcgagcagctatgacacaaagctctgatgaaccccag
agtgatgagaatggcggagaagcatcaactaaggtggccaagaaatgtctcttctggctc
actaagaacaccccaatctcaccggagaagatgcgctgcaaacgtaagatgctggaccgt
tcccccgagtctgactcaagtaacagaagagtaaaatctcgaagagaaagtgggacagat
tcctctagtgatgatgtggactcgcagaagaaaataaaacacttgaatacgctgaggcca
atagggaagtctcaccttgtcaaaagagaggatcaagatgtggctagaaagcagggtagc
atacaggctggaaagtctaaggctaaaactcgtcggaaagcaatggagtcgtcatcgtcc
acaagcgaagatgaagatgacgacgacgatgactttgggagtgaaggaagtgatcagaag
atgaagccaatcactgaagatgtggctttacttggagcagcagcgttccaccaatcttca
ggagatgaggagcaatctgggccctcgtgggcagcagaagaagatgatgatccagaaaat
agaatcgctaagaaaatgctattggctgaaatcaaagccaactactcctcgggcgaagat
ctgtcttcggatgaggaaacgcaagaggatgaatctgactcggagggtgagaaggagttc
aaacaaggcaataaggataatgaaacggatgaaaatggagaagacctgacatcagactca
tctgacaccacgtgtgatgggcccaactccagacaccatcttctccgccacaaactaacc
ttagatgagggaacgccaagtgacaaggccgagagtgacgtaggaaagccggagagcaag
cgaaaagccagcagcaaacacctgggctctgatagtgaaagtgatggtgacagtaacgag
tctgagccagaagatcttgggatgagcgaggagctgagtcagtccgaggatgaggccggt
gaagatggactcaaaagctccagattatccagtaaagagaaggaggcatcgcgtagttat
gaaaagaagataaaagtgccctgcatttggttgtctgactccagcagtgaaaagagtgat
aaagaggatggagatgagaacagcgacagtaaaggcaccccaaaaggacgcaaaaagatc
cgggatatcattgaagatgaaaatctccgtgctgagacccaggaagccctcagagaggag
gaggagagacgtcagcggttggcagaaaggaaacaacagatggaggacaggagagagata
attgatggaaaggatgagctgtctcaagtagcatgtcccatcaccaccaagctgattctg
gatcaagatgaggaaaccaagaatcctcttgttcaggtgcacaggaacctggtgacgaga
ctgaagcctcaccaggtggacggagtccagtttatttgggacagttgttgtgagtctgta
aagaaagccaactcctcccctggaacaggctgtatactggcacactgcatgggcctgggg
aagactctgcaggtggtaactttcctccacacggtgctgctgtcagagaacctgaaattc
agaagggccctggtcgtgtgtccacttaatactatcctcaactgggtcagcgagttcaag
aaatggcaaaacaacatgggaaaggataaagtgacagttaccgaactggctacaaaaaag
catcctgcagaacgactcagggctctgcagcggtggcagagcgatgggggtgttatgata
atggggtatgagatgtaccgcatcctgtcacaagcagagaaaatgaatgaggagtgcaag
aaagagttacagagcatactggtggatccaggtccagactttgtggtttgtgacgaggga
cacatcctgcgcaacgaagtgaccaaaatctccaaatctttaaatgccatcaagacccaa
cgaagagtggtgctaactggcacaccactacaaaacaacttaaatgagtatcactgcatg
gtcaatttcatcaaaaagaatctactgggctcactgaacgaattccgaaaccgtttcatc
aaccccatacagaacggccaatgtgctgactccacatcaagagacgtccgaatcatgaag
aagcgagcacatgttcttcatgcaatgttggtcgggtgtgtccagagaagagattactca
gagttgactcagtttctgcctcctaaatacgagtatgtgctggcagtgagggtttcacca
cttcagtatacgttgtatcgctactacctcgaccacgtcaccagtataggctccatgact
aacagagcaacggggaggattggagcaaacctgttcaaggactttcaggtgctcagcaga
atttggactcatccctggtgccttcagctcagcttcatcagcaaagaaaacaaggcatat
tttgaaaagaagagaattaaagcggcagctctgctgagaaaagaagaaaccactgtggtt
gagcgtggactgcgagagaacgaaggaaaagaagggaataccgatgacagcagtacagca
gttattgttggaaagaaagcaaccatcagctcgaagtctcagagtctagatgagggctgg
ttcaagaatctgctgactgaagaagatgccaaaatcctggagcactcggggaagatggtg
ctcttgtttgaaatcctcagaatggctgaagacctgaacgataaagtgcttgtgttcagt
cagtcgttgatctcattaaatctaattgaggatttcctcaggacttttcaccatgccaga
gacccatcctcattcaaagcgggtagctggattaaaaaccttgactactatcgtcttgat
ggttccaccagtgctccgctaaggaagaaatgggcagatcaattcaataatgccagcaat
gatcgcggccgattgtttctcatctcaacaagagccggctcacttggcatcaacctcgtt
gccgccaaccgggtcatcatctttgacgcctcatggaatccctcatatgacatacagagc
atatacagggtgtaccgcttcggtcagctcaaacaagtgtttgtgtaccgcttcttggct
cagggcaccatggaggagaagatctatgatcgccaggtgaccaaacagtctttgtcctat
cgagtggtggatcagcagcagattgagaggcacttcaccctttttgaactgactgaactt
tacgtgtttgagccagacctgctgggcgacccaaactctaagaaaagcaaaagaaccacc
cctgttttgccaaaggataaggtcctagcacagctattacaaacctgtaaagaccagata
gtgtctttccacgagcatcaatctctgctggaccataaacaagaggaggagctcagtgag
gcagaacgcaaagatgcctgggccgagtatgaggccgagtctaccaaccctccacccagc
tcaagcctaaacagcttggatacgaaaaccaacgaacagctaatggaattgctgaacagc
agcagagcaaatgtagcggaggcctttatggcaacgcagaggacgacttctcacactatc
gaggattacatgttacgagtgtggcaacagtatcctcagctgcctgaggccacggttaag
accaaagctaagatttggaaagtgtctgatgagaaggagaaggaacgtagacaggccttt
tatcgagacatttttgcacagcaacaaacgcttacacatagcattcaggccatactgaag
aatcgaaggattcaagtgaagcagccgaccgtgaccactgtgacccagcctggacagact
tga
DBGET
integrated database retrieval system
