Sander lucioperca (pikeperch): 116064742
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Entry
116064742 CDS
T07345
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116064742 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116064742 (nfrkb)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
116064742 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
116064742
NCBI-ProteinID:
XP_031175828
Ensembl:
ENSSLUG00000005759
LinkDB
All DBs
Position
13:13215140..13229218
Genome browser
AA seq
1277 aa
AA seq
DB search
MDALTHMLTDPLDPKEENDGQITEECMLGNCRLNLPEDLLEDPDIFFSVMSESTWSEVLS
DSQRQHLRQFLPQFPDNNVAEQDSTISDLFNNKDFNFGNPLYLAQKQFRDGYFNPEVVKY
RQLCAKSQRKRQLYSLQQYYHKLLKHILVSRKELLEFAVHNGLDFPPKRKLPTKTHVEMR
EPRVRRRLSRILKEVKTECGDSNASSDDDDISSWTPAPQSPPSPTPTVSLRVLPSLSTQD
MKTTEKIELGEWDLKAMLQNHREKRKRQPDHPDLMTSDLHLGDILSRANIGRKGTVPLFD
LSLPKKKIKDERRKKKIRTIKVESEDPCEILAPSDTPSAPPTSIINSLPDTPSTPLPNIK
EEIVEESQSSPVPVEEIAISFFSLLESILKAETLNSTSLLEEKVQMWQSSPASCLNVWFS
SVPCWSDLVLQALQFLAGETKDGMMALPSGFSPFLEFADESQQWKWIGPTQDTEKDLSAL
CQLWLDSKDLVIKTENEDMLEMTSPTPRVSTDYVVRPSTGDERQVFQIQEQQRYNQPHKA
FTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPPYVTILSLVRDAAARLPNGEG
TRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRSRS
QEEFERIHQAQAAAAKARKALQQKPKPASKPKSGSKDGSSKTTGCLEAGQDIGSNPMSPT
PTTPTPNTPGTPMSPLPCTTTTPTKTGVPDTIKTSTGVLLVSPPSLPQLGTILPTSQACP
PVSQPVTSQHAARIVSHLATGSLPQVRVVSTQPGLGSSVGGQQATLVHQTPHQIRMPVSM
SAKSISQAVVSVPLRSQSASPVQVPTTLSVSAVAVAKPQARSPGSPANNPVSPAMLQGVT
SPNIKQVSITGQLGMKTGGAGIPITATNLRIQGKDVLRLPPSSITTDAKGQTVLRITPDM
MATLAKSPVATVKLTPDFLSSATTGSKSISATLHVTPPHPSPSSASSATSCTGEVQTTKA
GPVTANLLKAAGDTAIRLMPTLAVTMADQKSRTFSSVTSPDKSGATIRIMPGLGVIPQKQ
GQTITMTTTTGSKTLTASTCANVVTMAASVVAGAKGITVAPGVSCSPLTLGTATATVRQV
PATVVTTQTGKLPARITVPLSVLNQPLKSKSVVTTPIVKGSLNTNSISSLGRNIILTTMP
AGTKLIAGNKPVSFVTAQQFQQLQQQGQATQVRIQTVQAQQLQQHMATGSPKSVSTVVVT
TAPSPKCAPDPPPAPKQ
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggatgccctcacccacatgcttacagaccctctcgatcctaaagaagaaaacgatgga
caaatcacagaggaatgcatgctggggaactgtagattgaacctcccagaggacctactt
gaggaccctgacattttcttctctgtgatgagtgaaagcacctggagcgaagtactgtca
gattcccagaggcagcaccttcggcagtttttgccacagtttcctgacaacaatgttgct
gagcaggacagcaccatcagtgacctattcaacaacaaagactttaactttggaaatccc
ctttatcttgcacaaaaacaattcagagatggttacttcaatcctgaggtggtcaagtac
agacaattgtgtgccaagtcccagaggaagcgacagttgtactcccttcagcaatattac
cacaaactgttgaagcacatcctcgtctccagaaaggagctgctggagtttgcggttcac
aatggtctggactttccaccaaaaagaaagttaccgaccaagactcatgttgaaatgcgg
gagccaagggtgagaagacgattgagccgcatattaaaggaggtcaaaactgagtgtgga
gacagcaatgcttcatctgatgatgacgacatatcatcatggactccagcaccccaatca
cccccctctcctacacccactgtctcgctcagagttcttcctagcctctccacccaagac
atgaagactactgaaaaaatagagctaggggagtgggacttgaaagccatgctgcaaaac
catcgggagaagaggaagcgacagccagatcatccagacttgatgacctctgatctccac
cttggagacatactttcaagagcaaatattggtcggaaggggactgtgccactttttgat
ctgtctctgcctaagaagaagataaaggatgagagaaggaagaagaaaataaggacaata
aaagtggaatctgaggatccctgtgaaattctcgcaccttcagacaccccatcagctcca
ccaacgagtatcatcaactccctgccagacacaccatctactccactgcccaacatcaag
gaggaaattgtggaagagtctcagagcagcccggttccagttgaagaaatagctatcagt
ttcttcagcttgttggagagcatcttaaaggcagaaacccttaacagcacttcactgtta
gaggagaaagttcaaatgtggcagtcttctccagccagctgtctcaacgtgtggttttca
tctgtcccatgttggtctgacttggttcttcaagccttgcagtttcttgcaggagagact
aaagatgggatgatggcactccccagtggcttttctccatttctggaatttgctgatgaa
tctcagcagtggaagtggattggccccactcaggatacagagaaggatctcagtgcactc
tgtcagctgtggctggactccaaagatttagttattaagacagaaaatgaagacatgcta
gagatgacttctcccacaccgagagtctcaactgattatgtggtgcggcccagtactgga
gatgagagacaagtgtttcaaatccaggagcagcagcgatacaaccagccacataaagcc
ttcacctttaggatgcacggctttgaatctgtggtggggcctgttaaaggggtgtttgat
aaggagatgtctctcaacaaagccagggagcacacattgctccgctcggaccgaccacca
tatgtcaccattctctctctggtgcgggatgcagcagccaggttacccaatggagaagga
acgagggcagagatctgtgaacttttgaaagactcacagtttctcgctccagatgtcact
agtgcacaggtgaacacagttgtcagtggggctctggatagacttcactatgagaaagac
ccttgtgtaaagtatgacataggacgcaagctctggatttacctgcaccgcagtcgcagt
caagaggagtttgagaggatccaccaggctcaagctgctgctgcaaaagcaagaaaagcc
ctacagcagaaacctaaacctgcatctaagcctaagtccggaagtaaagacggaagcagt
aaaaccacgggatgtctggaggcaggacaggatataggctccaatcccatgtcaccaacc
ccaacaacacctaccccaaacacacctggaacccctatgtcacccttaccctgcacaacc
accacaccaacaaagaccggagtcccggatacaatcaaaaccagcacaggtgttcttctt
gtgtcccctccctcattgccccagctgggaaccatcttacccaccagtcaggcttgtcca
ccagtttcacagccagtcacatcccaacacgcggctcggatagtgagtcacctggcgacg
ggctccctccctcaggtgcgggttgtttccactcagcctggtctggggtcttcggtagga
ggtcagcaggccacactggtacatcagacccctcaccagatcaggatgccggtgtcaatg
tcagccaagagcatttcacaggcagtggtttctgtgcctctgaggagtcagtctgccagt
ccagtccaggtgccgaccaccctgtctgtgtctgctgtagctgtggccaaacctcaagct
agatcacctggtagcccggctaacaaccctgtttcccctgctatgctgcaaggagtcacc
agcccgaatatcaaacaggtgtccatcacaggccaattgggaatgaagactggaggagca
ggaattccaataacggctacaaatctgcgcatccagggtaaagatgtcctacgtcttcca
ccgtcctccatcaccacagacgcaaaaggccagacggtgctgcggatcaccccagatatg
atggcaactcttgccaaatccccagttgcaactgtcaaactcacccctgacttccttagc
agtgccactacaggcagcaagagcatatcggcaactctccatgtgacgccaccccaccct
tcaccttcctctgcctccagtgctacatcctgcacaggggaagtacagaccaccaaagca
ggccctgttaccgctaacttgttgaaggctgcaggagacacagcaatacgtctgatgccc
acgttggctgtcaccatggctgaccaaaaatctaggaccttctctagcgtgacctcccct
gacaagagtggtgccaccattcgtataatgccaggccttggtgttattccacagaaacag
ggtcagaccatcacgatgacaaccaccaccggcagtaaaacactcacagcgtctacatgt
gctaatgtagtgaccatggctgccagtgttgtggctggtgctaaggggatcacagtggct
cctggagtctcgtgctcacctctgactctaggaacagctacagccactgtgcggcaggtc
ccagctacagtggttactacacaaacgggaaagttacctgcacggataactgtgcctctc
tctgttctgaaccaaccactgaagagcaaaagtgttgtgaccacaccgattgtgaaagga
agcctcaacacaaatagtatcagcagtctgggcaggaacatcatcctaaccaccatgcct
gctggcaccaagctgatcgcagggaacaaaccggtcagctttgtcacagcacagcagttc
cagcagcttcagcagcaaggacaggccacgcaggttcgcatccagacggtccaggcgcag
cagctccagcagcacatggcaacaggctccccgaaatctgtgtccacagtcgtagtcaca
acagcaccttcacccaaatgtgcccccgatcccccacctgctcctaaacagtga
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