Sander lucioperca (pikeperch): 116064829
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Entry
116064829 CDS
T07345
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116064829
Ion channels [BR:
sluc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116064829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Ank
YVC1_C
Motif
Other DBs
NCBI-GeneID:
116064829
NCBI-ProteinID:
XP_031175973
Ensembl:
ENSSLUG00000025764
UniProt:
A0A8D0B1F9
LinkDB
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Position
13:11256775..11264780
Genome browser
AA seq
1002 aa
AA seq
DB search
MENLTPEQWREIMNRKMRFPPELIGAIQEGNIEMLFGLLKTGDGIIRQLDESEDRQWRDA
LNLSIRLGNESCMDALLHGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
HSFSQAIFDHSIDNSQFAPGVTPLTLACQKDLYDIVNMLTQKGHVIPWPHKISCACLECS
NGRQYDLLKFSLSRINTYRGIASRAYLSITSDDAMLRAFGLSRELRKLSQKEPEFKPQYL
GLEEVCQEFAVELLGMCRNQSEVTTILNSCGNESQDSLEQQAFEEGIPNLSRLRLAVNYN
QKQFVAHPICQQVLSSIWCGNLSGWRGSRTAFKLFVSIGIFLTMPLLCLIYWTAPKSKVG
KILKIPVIKFLLHSASYLWFLITLLGESITMELYRDKFASRQQDILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDMMVLSMYLASFALRVLIMLKGYFLCHDYNGTEECIYF
TQTVREDWHHEDPQLIAEVLFAVTSLLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVTSPHLGRFNETFRFLFWTMFGMANQEYVDMPQYVVAEF
VGRVLYGIFTLIIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAVFYILRGIFRRICCCCCNCNSENKYPPIDSMTIDKGCEDSQLPYRQQVIK
ALVQRYIESACREFEETKRKDIGNRITLLTKTVCKMHSDMKVVQQLLMADGLPANGALTN
DGSSFLGKYITGAKNNFIGFNSRDDKNESLKVTLHREEEEVDKENVQLDTKQESDALQNQ
VGECGAEGSQQVTDCDVVKMEEGRAKTEPGDEKETEKKEQVEADTNENTDTEVKEEVVAG
TSFNHVKEKAEATQDEEEKRREGQLLTGAKVGEQHTETQNGRMETKWNKGRNFEHNVAEK
SGVTKPVANKMIPSPTGSSSSQDTGFGSQEGDGSFDGTLVRP
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctaacgccagaacaatggcgcgagattatgaacaggaagatgcggttccct
ccggagctcattggtgccattcaggaggggaacatagagatgctgtttggactgttgaag
accggtgatggcatcatccgccagctggatgagtctgaggatcgccagtggagggatgcc
ctcaacctgtccatccgcctcggcaacgagagttgcatggacgccctcctccacggggtg
aagtttgacttccggcagattcatgaggccctgctcgtcgctgtagacaccaaccagccc
agagtggtgaagcgcctgctggaccgcctggaccaggagaaaggcaacaagatggacgtg
cactccttctctcaggccatctttgaccactctattgacaactcccagtttgcccctggt
gtgacacctctgaccttagcctgccagaaagacctgtatgatatagtcaacatgctcacc
caaaaaggtcacgtcatcccgtggccacataagatatcctgtgcctgtctggagtgtagt
aacggccggcagtatgacctgctcaagttctccttgtctcggatcaacacctaccgtggc
atcgccagccgcgcctacctgtccatcacctccgatgatgccatgctcagagctttcggt
ctcagcagagagctccgcaagctctcacagaaagagccagagttcaagcctcagtacctg
ggcctggaggaggtttgtcaggagtttgccgttgaattgctgggcatgtgtcgcaaccag
agcgaggtgaccaccatcctgaacagctgtggaaacgagagccaggactccttagagcag
caggcctttgaggagggaatccccaacctgtcacgtctgcggcttgctgtcaactacaac
cagaagcagtttgtggcccacccaatctgccagcaggtgctgtcttctatctggtgtggg
aacctctccggctggagaggcagcaggacggcctttaagctgtttgtctcaatagggatc
tttctcaccatgcctctcctctgcctcatctactggaccgcacccaagtcaaaggtagga
aagatactaaagattcctgtgatcaagtttctcctccattcagcctcctatctgtggttt
ctcatcacgttactcggagaatcaataacaatggagttgtatcgagacaaatttgcttcc
cggcagcaggacatcctgcacagctccttccacatggtgtgggtagtcggattcttctgg
tatgagtgtaaggaagtgtggatcgaggggctgcggagttacttcctggactggtggaac
tgcttggatatgatggtgctcagcatgtacctggcgtcctttgcgttacgtgtgcttatc
atgctcaaaggttacttcctctgccatgattataacggcacagaggagtgtatctacttc
actcagactgtgcgcgaggactggcatcacgaggacccccagctgattgcggaggtgctg
tttgcagtgaccagtttgttgagcttcacacggctggcgtacatactgccagcacatgag
tctctgggaactctgcagatctccatagggaagatgattgatgatatgatgcgatttatg
tttatattgatgatcattggaacagccttcctctgtggcatcaacaatgtatatgttcct
tatgtcacctctccacatcttggcaggtttaatgagacgttccgcttcttattctggacc
atgtttggcatggccaaccaggagtacgtggacatgccacagtatgtggtggcagagttt
gtaggaagggttctgtacggcatcttcacactcatcatcgtcatcgtcctgctcaacatg
ctcattgccatgatcaccaactcctttcagaaaattgaggatgatgcagatgttgagtgg
aaatttgccaggtcgaagctgtacctcagttacttcagagagggcctcaccatgcctgtg
cccttcaacatcataccctcacccaaagctgtcttttacatcttaaggggtatctttaga
cgaatctgctgctgctgctgcaattgtaattctgagaacaaatatcccccgatagactct
atgaccattgataagggatgtgaagacagccagttaccttaccggcagcaggtgatcaaa
gctctggtgcaacgctacattgagtcagcttgcagggagttcgaggaaaccaagaggaaa
gatatcggtaatcggatcactctgctgaccaaaacagtctgcaagatgcacagtgatatg
aaagtggtccagcagcttctgatggctgatggactccctgcaaatggcgcattgaccaat
gatggctcctcctttctgggaaaatacatcactggtgccaagaacaatttcataggtttt
aacagcagagatgacaaaaatgaatcacttaaagtgacattgcaccgtgaagaggaagag
gtggataaagaaaatgtccagttggatacaaaacaggagtcagacgcactgcagaatcag
gtgggcgaatgtggagcagagggatcacagcaggtaacagactgtgatgtggtgaaaatg
gaggagggcagagctaaaacagaaccaggagatgagaaggaaactgagaaaaaagagcag
gtggaagcagacacaaatgaaaatactgatactgaagtgaaagaggaggtggtggcaggg
acaagttttaatcatgttaaagaaaaagccgaggccacacaggatgaggaagaaaaaaga
agggaaggacagctactcacaggggcgaaggtgggtgaacaacacacagagacgcaaaat
ggcagaatggagacaaaatggaataagggtagaaattttgagcataatgtagcagagaag
tcgggtgtcacaaaacctgtagctaacaaaatgattccctcgccaacaggcagcagcagc
tctcaggacacaggctttggttcccaagaaggggatgggtcgtttgacgggacactagtg
agaccgtaa
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