Sander lucioperca (pikeperch): 116064877
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Entry
116064877 CDS
T07345
Symbol
zgc:163098
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
KO
K12842
U2-associated protein SR140
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116064877 (zgc:163098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116064877 (zgc:163098)
Spliceosome [BR:
sluc03041
]
Complex A
U2 snRNP components
U2 related factors
116064877 (zgc:163098)
Complex B
116064877 (zgc:163098)
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Paralog
GFIT
Motif
Pfam:
Surp
CID
cwf21
RRM_1
CTK3
CARDB
Motif
Other DBs
NCBI-GeneID:
116064877
NCBI-ProteinID:
XP_031176090
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Position
13:complement(12320514..12332958)
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AA seq
880 aa
AA seq
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MADRKGKPVTPIKTLTKKEQEELKKKEEEKAAEVFEEFLASFEGSKKSVVKTFVRGGIVN
ATKEEEAAEDTKSKLYRPATKFVPVSQHVSPVSSGESKKSTFKRKTEEKKKSNLELFKEE
LKLIQEEREERHKKKKNDSGGGGGFGDLDTPLSGRSSLYDDLTVPTTTNLYISCISPKMN
EEILCKEFGKYGPLASVKIMWPRTDEERCRTSNRAFVAFMTRKDAERALASLDGKVIMGF
EMKLGWGKPARIPPQPLYTPVGVRATPPPPSGLPFNAQPRDRFRNDFTKPLGMSKGELDK
TLSEAVVKVVIPTERNLLFLIHRMIEFVVREGPVFEAVIMNKEKSNPDYKFLFDNKSQDH
VYYRWKLFSILQGQSPTEWRTADFRMFRGGSMWRPPILNNYSQRGEDREEVEEDASPEEE
LKKGQLRAEHRQKLETLLKELTPSREDIGNAMLFCLERADAAEEVVGHITESFSLLQTPL
QKKIARLYLVSDILYNSCAKVASASYYRKYFETKLTQIFGDLNAAHKNIQARLQAEQFKQ
KVMSCFRAWEDWAIYPEPYLIHLQNIFLGFAKAVEESTEIAEEVSCYLDGAPMDSAPIDG
LPLYSAPVDDLDGCPLGWDPLDGVPVDDIDGVPLGVAIDDIDGMPLEESNVPLSRVPLSK
WETTVDTGTFSQAKTESKWDMVVEHNSEDKVNVSVNSQDGVEDSDSDSSEDSGSSSKCDS
ADFQSSLRSFQMSESKRKRLRELEVKVMKIQDELESGKRPRKTGMSIQQQVEHYRNKLLQ
KEFKKDEEKNERLTSKSKDKSKDDRRDKDRSKRSEDGVRRRGWSRDPDDQIRKSRSISPL
KTRSPKWSKRSRSPSPDWKAGKSRSRSPHHSHKKAKKSKH
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggcagatagaaagggaaaacctgtcactccgatcaaaacactcacaaagaaagaacaa
gaggagctcaagaaaaaggaggaagaaaaagcagcagaggtttttgaagaattcttggca
tcatttgaaggcagcaagaaaagcgtagtgaaaacctttgtccgtgggggtatcgtgaat
gcaactaaagaggaggaagccgcagaggacaccaaaagtaagctgtatcgacctgctaca
aagtttgtccccgtgtcccagcatgtctcaccagtatcatctggtgaaagcaaaaagtct
acatttaaaagaaagacagaagaaaagaagaagagtaatcttgaactcttcaaagaggaa
cttaaactaatacaagaagagcgagaagaaagacataaaaagaagaaaaatgactctggt
ggtggtggaggatttggagatctggacacaccattatcagggcgatcatcattatatgat
gacctaacagtgccaaccaccactaacctctacattagctgcattagcccaaagatgaac
gaggagattctctgcaaagagtttggtaagtatggtcccctagccagtgtgaagattatg
tggccccgaacagacgaggagcgctgcaggacctccaacagagcctttgtggctttcatg
acacggaaagatgcagagagagccttggcttcacttgatggtaaagtgattatggggttt
gaaatgaagctgggatggggtaaaccagctcgcattccacctcagcctctctacacaccg
gtgggggtgagggccacaccgccacccccatcgggtctgcctttcaatgctcagccaagg
gatcgcttccgcaatgacttcaccaagccgctgggcatgtccaaaggagagcttgacaag
actctgtccgaagccgtagtcaaagtggttatcccaaccgaaaggaatctattattcctc
attcacaggatgatagagtttgtggtgcgtgaaggccccgtgtttgaagccgtaattatg
aacaaggagaaaagcaatccagattacaagttcctttttgacaacaaaagccaagatcat
gtgtactatcgctggaaactgttctccatcctccagggacagtccccgacagagtggagg
accgcagattttcgtatgttccgaggaggctctatgtggagaccccctatcctaaacaac
tactcccagagaggtgaagatagggaagaggtggaggaggatgcttcccctgaggaagag
ttgaagaaagggcaactcagagctgagcacagacagaagctggagacattgcttaaagag
ctcacgccaagcagagaagatatcggcaatgccatgctgttctgtcttgagcgagcagat
gcagcagaggaagtagtgggacacatcactgaatctttttccttgcttcagacgcccctt
cagaagaagattgccagattgtacctcgtgtcagacatattgtacaactcgtgtgccaaa
gtagccagcgcatcatattatcgtaaatattttgaaacaaagctaacacagatatttgga
gaccttaatgcggcgcataaaaacatacaagccaggctgcaggcagaacagtttaagcaa
aaggtcatgagttgttttagagcatgggaggactgggccatatacccggagccttatcta
atccaccttcaaaacatcttcctgggcttcgccaaagcagtggaggaatcgacagagata
gcagaggaagtatcctgctatctggatggtgcgccaatggacagcgcacccatcgatggg
ttacctttgtacagcgctccagtggatgacctcgatggctgccccttaggctgggaccct
ctagatggagtccctgttgacgacatagacggtgttcccttaggagttgctattgacgac
attgatggaatgcccttggaggagagcaacgttcctctctccagagtgcctttatctaag
tgggagacgacggttgatactgggacattttctcaagccaaaactgagtctaagtgggac
atggtggtggagcataacagtgaagacaaagtgaatgtaagtgtcaactcgcaggatgga
gttgaagactcagacagtgacagtagtgaggactccggcagttcgtccaaatgtgacagt
gcagatttccagagctccctcagaagttttcagatgtctgagagcaaaaggaaaaggttg
agagagctggaggtaaaggttatgaagattcaagatgagttggaatctggcaagaggccg
aggaagactgggatgagcatacagcaacaagtggagcactacaggaacaaactgctacag
aaggagtttaaaaaagatgaagaaaagaatgagaggttgacatcaaagtctaaagacaag
tcaaaggatgacagaagggacaaagataggagcaaaagaagtgaagacggggtcagaaga
cgaggatggagtagagatcccgatgaccagatccgaaaatcgaggagcatctctccttta
aagacaaggtctcccaaatggtcgaagcgttcccgatcaccgtctccagactggaaggca
gggaagtccaggtcacggtcgccgcatcactcccacaagaaggcaaaaaagagcaaacat
tga
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