Sander lucioperca (pikeperch): 116064912 Help Entry 116064912         CDS       T07345                                  Symbol pcdh1a Name (RefSeq) protocadherin-1 isoform X1   KO K16498   protocadherin delta 1 Organism sluc  Sander lucioperca (pikeperch) Pathway sluc03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:sluc00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     116064912 (pcdh1a)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:sluc01009]     116064912 (pcdh1a)   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:sluc04515]     116064912 (pcdh1a) Protein phosphatases and associated proteins [BR:sluc01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      116064912 (pcdh1a) Cell adhesion molecules [BR:sluc04515]  Cadherins   Protocadherins    116064912 (pcdh1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_2 Cadherin_CELSR2_9th He_PIG Fibulin_C PepSY RET_CLD1 Syndecan Motif Other DBs NCBI-GeneID:  116064912 NCBI-ProteinID:  XP_031176150 LinkDB All DBs Position 13:9197039..9293032 Genome browser AA seq 1200 aa AA seqDB search MELKLQVVLFWVMVLHCGSAEGSILYRVQEEQPPNTLIGSLASDQGLPDSGHLYKLEVGA PYLRVDGKTGDIFTTEIPIDRETLRDCRSLAKGKPCYLEFEVSVTDLIQNQSPRLIEGRI EVQDINDNTPQFPSSVLTISVPENTIMGALFSIPLATDRDSDRNGVADYALTAGPDAATL FGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSSALLRVVVTDANDN SPKFERSTYEAEVSENSPVGHSVLQVKANDSDMGPNGEIEYTLHQAVDPVPKLLRIDRST GIIYVKGSLDREEISSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVT HSEGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSSSDNKRKY FLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPIFSPTVFEVDFA EENQPGEKVLDVIASDADSGTNAELLYNIAADSSIKGLFEIDPNTGEVRARSPLDREHKE RYEFRVTAADKGSPVHKGTATVVIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTV LDVDKGENAHVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDEGEPPRS SYVGVTINVLDENDNDPVVTKPSNSSFRRLSPLASPDSHVEVVEAEDLDSGPNAELVFSI TGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPARHAIALVHIYVNETI SNVSLVEALVGHSLYTPLDRDIAGDPNNGFAAQRSNILFGSLAGVAGVVMLILVVVFIRH RIQRETKSGYQAGKKETKDLYAPKQAPKNAKGKRGRKGKPQKSPKPLGEDEKVSLQKSLK FNLDGVNDSPRIHLPLTYSPGSPDIGRHYRSNSPLPSIQLQAQSPSASQKHQAVQDLPAA NTFVGTGGDDNSTGSDQYSDYSYKTSQLKYSNKQAHTWFCEWHMHPHRRVTFSTTNPVQD LQDASQHSYYDSGLEESETPSSKSSSGPRIGPLTLPEDHYERTTPDGSIGETEHPENDIR SLPDVAMTGNCTTECSELGHSDACWMPGHPSPVRKTRNPPKLSTFVPYQERGSLGRLANG SARLGGEEHQSRLPPSRSAYSNSGHDASQDCPLEEMPLSVASEFPPTSPSAHTPKREIYL NT seq 3603 nt NT seq  +upstreamnt  +downstreamnt atggaactgaagttacaagtagtgctgttctgggtcatggtgctgcactgtggctctgct gaaggcagtatcctgtaccgggtccaggaggagcagcctcccaacactcttattggtagc ctggcatcagaccagggcctgccagactcgggtcatctctacaagctggaggtgggtgcc ccttacctccgtgtcgatggaaagacgggagacattttcaccacagagattcccatagac agagagacactgagggactgtcgatccctggctaagggtaagccctgctacttggaattt gaagtatcggtgacagatctgatacaaaaccagagcccacgactcattgaaggacgcatt gaggtacaggacatcaatgacaacactccacagtttccctcttctgtgctcaccatctct gtcccagagaacacgatcatgggggcgctgttctccatacctctagctacagacagggac tcagacaggaatggggtggcggattatgctcttactgcagggccagacgcagcaacccta tttggtttacaggtggctgacgacaggggggggaagctcccacagctcattgtcctgggc aacctagatcgtgaattaaaggattcctatgacctcaccatcaaggcagtggatggaggg aacccacagcgctacagcagtgctctgctgagagtggtagtcactgatgccaatgacaac tctcccaagtttgaaaggtccacgtatgaggcagaagtgtcggaaaacagtccagtgggg cactctgtgttgcaggtcaaagcaaatgactctgacatgggccctaacggagaaattgag tatacccttcaccaagcagtcgacccagtgccgaaactcttacgaattgatcggtccact ggcattatctatgtcaaaggatccctggacagggaggaaatcagcagcttgtccttctat gtagtggcgagagataagggtcctcaacctaaaagctcgaagacatttgtaactattgag gtgactgaccagaatgacaacgctcctgctgtggagattcgtggaattggtcttgtgaca cacagtgaaggagtggctaacatttcagaggacatgcctgttggaacagccgttgctttg gtgcaagtgtctgacaaggatgagggagagaatgctgtggtcacttgtgtggtcgcggga gatgtgcccttccagcttcgccctgccagcgactcatccagtgacaacaagaggaagtat ttcctacagaccaccactcccctcgactacgaaaggattagggattaccgagtagagatt gtggctgtggattctggaaatccagcactttctagtacaaattctctgaaggtgcaggtg actgatgtgaacgacaactctccaatattctcaccaaccgtgtttgaggtagattttgct gaagaaaaccaaccaggtgagaaggttttggatgttatagcgtctgatgctgacagtggc actaacgcagaactcctttataatattgcggcggactcatccatcaaaggtctgtttgag attgacccaaatacgggcgaagtaagagcccgaagcccgcttgaccgtgagcataaagaa cgctacgagttccgggtcactgcagcagataaagggtcacctgttcataaaggtacagca actgttgtaataaaagttcttgaccgcaatgacaatgaccccaagttcatgcttagtggc tacagcttttcagttttggaaaacatgcctcccctcagtccagttggcatggtgacagtc ctggatgtagacaaaggtgagaacgcccatgttcacctctctgtagagcctgatggaggg aagtttgttgttcaaaatggaacaggcaccattctttcaagcatctcatttgacagggag aaagagagcagctatactttccgtctaaaagcagtggatgaaggagagccacctcggtct tcatatgtgggcgttaccatcaatgtattggatgaaaatgacaacgaccctgtggtcaca aagccctccaattcctctttcaggcgattgtcacctctagcttccccagatagccatgtt gaggtagtggaagctgaagacctggatagtgggcctaacgcagagctggtcttcagtatt actggtggaaacccttaccagttatttcgcatttccccctccagtggggagatcactcta gcaaaagagatgacccgcaaacatggtggacttcatcgcctagtggtgcgtgtgagtgac agggggaagcctgcacgtcatgccattgccctggtccacatttatgtcaatgaaaccatt tcaaatgtcagcttagtggaggccctagtaggacacagtctttacactccactggacagg gacattgctggtgatcctaacaatggttttgctgcacagcgtagcaacattttgtttgga agccttgcaggtgtggcaggtgttgtcatgttgatcttggtggtggtatttattcgacac cgcatccagagagaaacgaagagtgggtatcaggctggcaagaaggaaactaaggactta tatgcacccaaacaggcaccaaagaatgccaaaggcaaacgaggaaggaaaggaaaaccc caaaagtcccctaaaccactcggtgaagatgagaaagtcagccttcaaaagagcctcaag ttcaaccttgatggagtcaatgatagccccaggatacacctgcccttaacatattcacca ggaagtcctgatataggcagacactaccgctccaactcccccttaccctccatccagctg caggcccaatccccttcagcctctcagaagcatcaggctgtccaggaccttcctgccgcc aacacctttgtagggacgggaggagatgacaactctaccggctcagatcagtactcagat tacagctacaagaccagccaactcaagtacagcaacaaacaggcgcatacgtggttctgc gagtggcacatgcatccccatcggcgagtgaccttctccaccaccaaccctgtgcaggac ctgcaggacgcctctcagcacagctactatgacagcggcttggaggaatcggagactccc agcagtaagtcatcatctggtcctcgcatcggacccctgaccctgcctgaggaccactat gagagaaccactccagatggcagcattggagagaccgagcaccctgaaaacgatatccgc tccctccctgatgtggcaatgaccggaaactgtactactgagtgcagcgaattgggccac tcagacgcctgctggatgcccgggcatccctcccccgtacgcaagaccaggaaccccccg aaactctccaccttcgtgccttaccaggagagagggagcctgggacgcctggctaacggg agcgccaggctgggtggcgaggagcaccagtcgcgccttccaccctcccgcagtgcctat tccaacagtggtcacgacgccagtcaggactgccccttagaggagatgcccctgagtgta gcctctgagttcccacccacctccccctctgcccacactccaaaaagagaaatttacctg tga

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