Sander lucioperca (pikeperch): 116064979
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Entry
116064979 CDS
T07345
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sluc04990
]
116064979
Domain-containing proteins not elsewhere classified [BR:
sluc04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
116064979
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
THSD1_N
THSD1_D3
THSD1_D2
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
116064979
NCBI-ProteinID:
XP_031176267
LinkDB
All DBs
Position
13:14853347..14860188
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AA seq
950 aa
AA seq
DB search
MQRAVSLLPFLLALMGYAFAGLSIWPSFHVALSNASVFVEFSTRSNSSTIRNTSLSLVNT
ETNTTLLTRTLPNNQSAGRVEFNCSCFLYAGTFRFLLRQTSISTFSRANGTHDSSTESTS
WWWSSELQVQWPTFHIAVDRAGNHSGSFQVGISTNEHFQPCSSGIDSALFLEVSYMEYNQ
IGRNSIDKVQARTRHPIKPLRSQSVELSCAFPFTERDFIRVALRSPHSEQDVKSSGPLYL
SRIFSYKLLVENTHAYRSACEGTMTVKLITPPCAHINGKVMLYKDAGVGRGVAVSSGMEA
GGTAVMEFGPDEPSSPLLAFNWLTQGENETEFNCSVFYPGRNKYCFRFVFNFSRSPSPAQ
TCLVVHRSIESWGPWLPWSVCSVSCGEGMRERVRECLLPSGVGGMQCTGMVKEQSLCSLE
DCAVLPVPSPSLPPVAVRVVPLGGNMVVVAGISLCLAVILATVVVTLWRKLCKTPQCSSV
RRGSMHSPGGRKLSDEASICGHSLQRPSLSDGHGPPGGVGVAQKDRPFLGSQPLSQTLLI
PLSQDPERLSPTGQKMLPPIFGYRLAQQQLKEMKKKGLKEATQLYHVSSSPVHDTVVETS
ASPTNSPIPAPTGFAHLTLPLGLQDDANHNHFCIAEPPSQTSRVTPDRLSPRVELVLGPS
VSAHASGGSSKWRDRTADWVEMVERSGLAGFRGGGDAGMENSYHKNPNFRRTSSFNDTKP
QPLSSVHSRQFRERSMTQVGSRTLPEGSCWTKAGRERQPYSSCPIPEYGAPEWAKSRPQR
NDQRKPWIEKAAPSHNNELKHTGTNTNSISASEKHVKANLSGTGERQRSDETGGVEGISG
IGGPATGPASLSVDRAQRAEQNWNRRGPSPIQRNILARKLKEAQSCSGVKGRQRSSTFSV
SPLEQRKSLCHSLPMSGGCSSSGGSPYRLSEAEQRMLDLDLSSAYVGEEE
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgggctgtctcactgctgcccttcctgcttgcgctcatgggatatgcttttgca
gggctcagtatctggccctccttccacgttgctcttagcaacgccagtgtatttgtggaa
ttcagcactagatccaacagcagcaccatccgcaacacaagcctctctctggtcaacacg
gaaaccaacaccacccttctcacaaggactctccccaacaaccaatcggccggtagggtg
gagttcaactgttcttgcttcctgtatgcaggaactttccgattcctgctgaggcagacc
agcatctctactttttctcgtgctaatggcacccacgacagtagcacagagagcacttcc
tggtggtggagttccgaactgcaggtgcaatggcccacctttcacatcgctgtggacagg
gctggaaaccactcaggatcttttcaggttgggatatccactaacgaacactttcagcct
tgctccagcggcattgactcggctctctttctagaagtcagctacatggagtacaaccag
attgggcgaaacagcatcgacaaggtccaagcccgcacccgacacccaatcaaacccctc
cgttcccagagtgttgagctgtcctgtgctttccccttcacagaaagagacttcatacga
gtggctctacggtctcctcattcagaacaggatgtgaagagctctggacctctctacctg
tcccgtatcttctcctataagctgctggtggaaaacacccatgcttacaggagtgcttgt
gaagggactatgactgttaaactgataaccccaccttgtgctcacatcaatggcaaagta
atgctgtataaggatgcgggtgttggaagaggggttgctgtttcctctgggatggaagca
ggtggaacagcagtgatggagtttggaccagatgagccctcttcacctctgttggccttt
aactggctgactcagggagagaatgagacagaattcaactgttctgtgttttacccagga
aggaataagtactgctttcgctttgttttcaacttcagtcgctcccctagtccagcacag
acctgtttggtggttcacaggagtatagagtcatggggcccgtggctgccatggagtgtg
tgcagtgtgagctgtggagaggggatgagggaaagagtgcgtgagtgtttgctgccctca
ggtgtgggagggatgcagtgcaccggcatggtgaaggaacagtctctctgctcactggag
gactgtgccgtgttgcctgttccttctccatccctcccccctgtggctgtcagagttgtg
cccctaggtggtaacatggttgtggtggctggtatctccctttgcctagctgtgattctg
gctactgttgtggtgactttgtggagaaagctttgcaagacccctcagtgcagctctgtc
cgcagaggctccatgcattcccctggaggacgcaagctttccgatgaggcatccatttgt
ggccacagcctccaaagacccagcctgtctgacggccacggccccccaggtggcgtgggt
gtagcccagaaagacaggcctttcctgggcagtcagcctctctcacagaccctgttgata
cctctctcacaggacccagaaagactgtcccccacaggtcagaagatgttgccaccaata
tttgggtaccgattggctcagcagcagttgaaagaaatgaagaagaaggggttaaaggag
gcaacacagctgtaccacgtctcttcaagcccagttcatgacactgtggtggagacatca
gcttcccccacaaactcccccatccctgcaccaactggattcgctcatctcacactccct
ttgggcctccaggacgacgctaaccacaatcatttttgtattgcagagcctccatcgcag
acttctagggtcacgccggacagactgagtcccagagtggagctggtcttaggtccttct
gtctctgctcatgctagtgggggcagctcaaaatggcgtgaccgcactgctgactgggtg
gagatggtagagaggagtgggttagcaggtttcagaggaggaggagatgcagggatggaa
aactcctatcataagaatccaaatttccgcaggacctccagttttaatgacaccaaaccc
cagcctctatcctctgtacactccagacagttcagagaaaggagcatgactcaggtggga
tctcggacccttcctgaaggaagttgttggactaaagcaggacgggagaggcagccatac
agctcttgccccattccagagtacggggccccagagtgggctaaatccagaccacagaga
aatgaccagaggaagccctggatagagaaagctgctccttctcacaacaatgaactcaaa
cacacaggaaccaacacaaacagcatatcagcatctgagaaacatgttaaagcaaacctc
agtggcactggggaaaggcaaaggagtgatgagacaggaggtgttgagggaatctcaggg
attgggggtccagccacggggcctgccagcctgagtgtggatcgcgcacagcgagctgag
cagaactggaaccgtcgcggcccatcgcctattcagaggaacatcctggcccggaaatta
aaggaggctcagtcgtgctctggggtcaaagggcggcagcgcagctccacctttagtgta
tcgcccctggagcagaggaaaagtctctgccactctctgccaatgtctggaggctgcagc
agcagtgggggctcaccctacaggctgagtgaggcagagcagaggatgttggacctagat
ctgtcctcagcatatgtaggggaagaggagtag
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