Sander lucioperca (pikeperch): 116065010
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Entry
116065010 CDS
T07345
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116065010 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116065010 (chrne)
Ion channels [BR:
sluc04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
116065010 (chrne)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
SLATT_5
Motif
Other DBs
NCBI-GeneID:
116065010
NCBI-ProteinID:
XP_031176314
Ensembl:
ENSSLUG00000001932
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All DBs
Position
13:11437572..11453224
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AA seq
518 aa
AA seq
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MMAACRFWICFGVVTILGTSMVQVQCNEESKLIGDLFKGYNKNIRPVVHPEDKLEVQIKL
TLTNLISLNEKEETLTTNVWIEIQWSDYRLTWNASNYYGIDVIRVPYNMVWLPDIVLENN
IDGKFDVAYYANVLISSNGWMYWLPPAIYRSTCAIEITYFPFDYQNCTLAFRSQTYSANE
MDLILAVGEKGETIEWVDIDPEAFTENGEWAIVHRPARKRINTRYTPDDLEYQEITFNLI
IQRKPLFYIINIILPCSLISSLVVLAYFLPAQAGGQKLTVSISVLLAQTVFLFLIAQKIP
ETSLSVPLIGKYLIFVMSVTTLIATNQIVVLNFSLRSPNTHTMSHTIKHLFLEMVPRFLG
MSPLVDDSEVTTEVNGVRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLTRSIVD
NMDVSSTANLYKSLAQAAPEIKQCVDACNFIAESTKQQNNIGSEIESWVLIGKMIDKVCF
WAAMLLFIIGTVWIFLTGHFNRAPDFPFPGQSKKYVPI
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagcatgcaggttttggatatgttttggagttgtaactattctcgggacttca
atggttcaggtgcagtgtaatgaggagtccaagctgatcggtgacttgttcaaaggctac
aacaagaatattcgcccagtagttcatcctgaagacaagctggaggttcagatcaagctt
accctcactaaccttatctccctgaatgaaaaggaggagactcttacgactaatgtgtgg
attgagattcaatggtccgattatcgcctcacctggaacgcatctaactattacggcatt
gatgttattcgtgtcccatacaatatggtttggcttcctgacattgtccttgagaacaac
attgatggcaagttcgatgtggcttactatgccaatgtgttgatcagcagcaatggttgg
atgtactggttgcctcctgctatctatcgcagcacttgtgccattgagatcacctacttc
ccatttgattatcaaaactgcacgctagcattcaggtcccagacgtacagtgccaatgaa
atggacctcatcttggctgttggagaaaaaggcgaaactattgagtgggtggacattgac
cctgaggctttcacagagaatggtgagtgggccatcgtccatcgtccagccaggaagagg
atcaacacacggtataccccagatgacctagagtatcaggagatcacattcaatctgatc
atccaaaggaaacccctcttctacatcatcaacatcatcctgccctgctccctgatctcc
tcgctagttgtgctggcctacttcctacctgcacaagccgggggacaaaagttgactgtg
tccatctctgtcttgctggctcaaactgtcttcctctttcttattgctcagaagatccct
gagacatctctttctgtccctctcattggcaagtacctgatctttgttatgtctgtcact
actctcattgccactaatcaaattgtggtgctaaacttctccctgcgcagccccaacact
catacaatgtctcataccatcaaacatttgttcctggaaatggtaccccgcttccttggc
atgtccccactggtggatgatagtgaggtgacaacggaggtaaacggagtgagggaacga
cggcgcagctcctttggcctcatgcagagagcagaggaatatgtactgaaacaacctcgc
agtgaaatgatgtttgacaaacaaagagagaggcatggtctcacacgatcgattgtggat
aatatggatgtcagcagcacagccaacctgtataagagtttggctcaagctgcgcccgag
atcaagcaatgtgtggatgcctgcaactttattgctgagagtacgaaacaacaaaataac
attggatctgaaattgaaagctgggtactgattgggaagatgatcgacaaggtgtgtttc
tgggctgccatgctcctctttatcattggcacagtgtggatcttcttaacaggacacttc
aaccgggcgcctgactttccatttcctgggcagagcaaaaaatatgtcccaatttaa
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