Sander lucioperca (pikeperch): 116065050
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Entry
116065050 CDS
T07345
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116065050
Spliceosome [BR:
sluc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116065050
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
116065050
NCBI-ProteinID:
XP_031176363
Ensembl:
ENSSLUG00000023155
LinkDB
All DBs
Position
23:17375677..17394751
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AA seq
542 aa
AA seq
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MCACAVSVEAGKTTGRKGREIPADMDGISDVAVGVKRGSDELSMYNSPNSGMSSISDGAS
NGSDSKKLRVEEAPPSRVLHIRKLPNEASETEVIALGLPFGKVTNILTLKGKNQAFLEMG
TEETAITMVNYYSTVTPHIRNVPVFIQYSNHKELKTDAGNQRTQAVLQAVSAVQSGGSPS
SDVQEALAAASSPVLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFS
DPVNAQQAKLALDGQNIYNSCCTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSI
DPSVAAAFSKDSNSLLGKIPGALNPLSAAAAAAAAAGRVALAGQTGSSGVLLVSNLNEEM
VTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMYGKIIRVTL
SKHQTVALPRDGLDDQGLTKDYANSPLHRFKKPGSKNFQNIFPPSATLHLSNVPQDVTED
DLRLLFSNAGGTVKAFKFFQDRKMALIQMSTVEEAIQALIDLHNYNMGGSQHLRVSFSKS
TI
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcgtgcgcagtgtcggtggaagctggaaagacaacaggacgaaaaggacgagaa
atacctgcagacatggacggcatcagcgatgttgcagttggagtgaagagaggatcagat
gaactgagtatgtacaacagtcccaactctggcatgagcagtatcagtgacggggcttcc
aatggcagtgacagtaaaaagctgagggtggaggaggccccaccatctcgtgtactccac
atcaggaaactgcccaacgaggcctcagagaccgaagtcatcgccctcggcttgcctttt
ggcaaagttaccaatatcctcacactgaaggggaagaaccaggcattcttggagatgggg
acggaggagacggccatcactatggttaactactactccactgtaactcctcatatccgc
aatgtccctgtctttattcagtactccaatcacaaagaactcaaaactgatgctggcaat
cagcggacccaggcggtgcttcaggcagtgtcggcggtccagtccggcggctcccccagc
tcagacgtacaggaggctctggctgcagcctccagtcctgtgctgcggatcatcatcgac
aacatgttctaccctgtaacgctggatgtgctgcaacagattttctccaagtttggcaca
gtcatgaagataatcacattcaccaagaataatcagttccaggcccttctgcagttcagc
gatcctgtcaatgcacagcaggccaaactggcactggatggccagaacatctacaactca
tgttgcacgctgcgtatcgacttctccaagctggtcaacctgaatgtcaagtacaacaac
gataagagtcgcgactacacgcggcccgagctgcccgctggtgacggccagcccagcatc
gacccctcggtggccgctgccttcagcaaagactccaactccctcctcggtaagatccca
ggagcgctgaaccctctgagcgcggcggctgcggcggctgctgctgcagggagggtggcc
ctcgctggacagacgggctccagcggagtcctgctggtcagcaacctcaacgaggagatg
gttacgccccaaagtctgtttaccctcttcggagtgtacggcgatgtccagagggtgaag
atcctttacaataagaaggacagcgctctcattcagatgtccgatggcaaccaggcccag
ctagcaatgagccacctgaatggccaaaagatgtacgggaagatcatccgggtgacgctg
tccaagcaccagacggtggcgttgccccgtgacggcctggacgaccagggcctgaccaag
gactacgccaactccccacttcaccgcttcaagaaacctggctccaagaatttccagaac
atcttcccgccatctgccacccttcacctctccaacgtcccacaagatgtgacggaggat
gacctgcggctgctcttctccaacgctggaggcactgtgaaagcattcaagtttttccag
gatcgcaaaatggctctgatccagatgtcaacagtggaggaggccatccaggccctgatt
gacctgcacaactacaacatgggaggcagccagcacctgagagtctccttctccaagtcc
accatctaa
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