Sander lucioperca (pikeperch): 116065196
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Entry
116065196 CDS
T07345
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03030
DNA replication
sluc03410
Base excision repair
sluc03420
Nucleotide excision repair
sluc03430
Mismatch repair
sluc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116065196 (pold1)
03410 Base excision repair
116065196 (pold1)
03420 Nucleotide excision repair
116065196 (pold1)
03430 Mismatch repair
116065196 (pold1)
03440 Homologous recombination
116065196 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sluc03032
]
116065196 (pold1)
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116065196 (pold1)
Enzymes [BR:
sluc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116065196 (pold1)
DNA replication proteins [BR:
sluc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
116065196 (pold1)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
116065196 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
116065196 (pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
116065196
NCBI-ProteinID:
XP_031176474
Ensembl:
ENSSLUG00000004188
UniProt:
A0A8C9XFY2
LinkDB
All DBs
Position
21:complement(13422742..13434582)
Genome browser
AA seq
1105 aa
AA seq
DB search
MDFKRRNGGPYMGGASQAKRGKTAGEWEDSPSQFEEELSMFEEAEMEAEEMEGQAGHDVI
PVGDLFSADLNPRWRRPHAPSLDPSSDTLVFQQIDLDYYLGATVAGMPGQSQGKVPIIRM
FGVTDSGNSVCCHIHGFAPYFYVPAPSGFTSDYLGEFKRELNSVVLKDMRSNKDNISVTV
LAVDITRKESMYGYHGKRSLDFLRITMAMPRLIAPAKRLLEQGFKFGPFPIQVYQSFEAN
IDFEIRFMVDSDVVGCCWIELPKSKYRVREEKSMGGTDARYPGKESLCQYEVDVGWTDLI
RHPAEGDWQRIAPLRVLSFDIECAGRKGIFPEADKDPVIQIASMVQRQGETEPFIRTVFT
LQSCASIVGSQILCFTQEKQLLQSWAEFLRTVDPDIITGYNIQNFDFPYLIDRAAALKVN
LFPYLGRVRGIKSVLRELNFQSKQMGRRENKTINIEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKAGGGEDYTGATVIEPEKGYYSV
PIATLDFSSLYPSIMMAHNLCYTTLLQKGSAERQSLSPEDFIKTPTGDMFVKSSVRKGLL
PEILENLLSARKRAKTELKKETDPFKRQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEQTKQLVESKYNISNGYQGDAKVIYGDTDSVMVKLGVATVREAMDIGT
EAAEWVSSHFTPPIKLEFEKVYYPYLLINKKRYAGLYFSGSADTHEKMDCKGIETVRRDN
CPLVANLINTCLQRILIDRDPQGAVAHAKEVISDLLCNRIDISQLVITKELTRTAQEYAG
KQAHVELAERMKKRDAGSAPNLGDRVPYVIIKAAKGVAAYMKSEDPIFVLENNIPIDTQY
YLEQQLSKPLLRIFEPILGESKAENILLKGDHTRCKTVLTSKIGGLMAFAQKRSTCIGCK
AVLKTDAAVCDFCKKKESELYQKEIFHLSTLEERFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQSKLVDRFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaaagacgcaatggtggcccttatatgggtggtgcgtcccaggccaaacgg
ggtaaaacagctggtgaatgggaggacagtccatcacagtttgaagaggagttgtccatg
ttcgaggaagcagagatggaggcagaggagatggaggggcaggcaggtcatgatgttatt
cctgtaggtgacctcttctcagcagaccttaaccctcgttggcggcggcctcatgcccct
tcactggacccatcatctgatactttggtgtttcagcagattgatcttgactattattta
ggggcaacagtggctggcatgcctggccagtcacagggaaaagtcccaatcattcgaatg
tttggggtgacagacagtggcaatagtgtatgttgccacatccacggttttgcaccttac
ttctatgttcctgcaccaagtgggttcacatctgattacctgggtgaatttaaaagagag
ttgaactctgttgtcctgaaggacatgcgatccaataaggacaacatctctgtcacagtg
ttggctgtggacattacccgcaaagagagcatgtatggttaccatggaaaacgcagtctg
gattttttgcggataacaatggcgatgcctcgtctcatcgccccagcaaagagactgctg
gagcagggcttcaagtttggacctttccccatccaggtttaccaatcctttgaggccaac
atagattttgagataaggtttatggtggacagtgatgtggtgggatgctgctggattgaa
cttcccaaaagcaagtacagagtgcgtgaagagaagagcatggggggcacggatgctcgg
tacccaggcaaggagtccttgtgtcagtatgaggtggatgtgggatggacagatttgata
agacaccctgcagaaggagactggcaaaggatcgctccgctcagggtcctcagctttgac
attgagtgtgcaggaagaaaaggaatcttcccagaagcagacaaagaccctgtgattcag
atagcatctatggtgcagcggcagggtgagacagagcccttcattcgcactgtgttcact
ctccagtcctgcgctagcatcgtgggctctcagatattgtgctttacacaggagaaacag
ctactgcagagctgggcggagtttttgaggacggtggacccagacatcatcactggatac
aacatccaaaactttgactttccctacttgatcgacagagcagctgctttaaaggtgaat
ctctttccttacctcggccgagtgcgaggcatcaagtcagtcttgcgagaactaaacttc
cagagcaagcagatgggccgcagagagaacaagaccattaacatagagggccgggttcag
tttgatctcctgcaggttcttctcagggactataaactgcgctcgtacacactgaacgca
gtgagtttccacttcctgcaagagcagaaagaggatgtgcagcactccatcatcactgat
ctgcagaatggcaatgaacaaacacgtcgtcgtttggctgtctactgcctgaaagacgcc
tacctcccactgcgcttgctgcagaagctgatgtgtgtgattaactacatggagatggcc
agagtgacaggtgtgcctctcacctacctgctatcaagaggacagcagatcaaagttgtc
tctcagctgctgcgacaggccatgaaacaagacttggtcatgcctgttgtaaaagcagga
ggaggagaagactacactggagcgactgtcattgagccagagaaagggtattacagcgtc
cctattgccaccctggatttctcctccttgtatccgtccatcatgatggctcacaatctg
tgctacaccaccctgctgcagaaaggctcagcagagagacagagcctctcaccagaggac
ttcatcaagactccgactggtgatatgtttgtgaagagctctgtgaggaaaggacttcta
cctgagatcctggagaatctgctgtctgccaggaagagggccaaaacagagctaaagaag
gagactgaccctttcaagaggcaggtgctggacggccgacagctcgcactcaaaatcagc
gcaaactccgtctatggcttcacaggtgctcaggtgggcaagctgccctgcctagagatc
tcacagagtgtcacaggttttggaagacagatgatcgagcaaactaaacagttggtggag
tccaagtacaacatttccaatggttaccaaggtgatgccaaggtaatttatggggacaca
gactccgtcatggttaagcttggagttgctacggttagggaggctatggatattgggacg
gaggcagcagagtgggtatcgtcccatttcacaccgcccatcaaactggagtttgagaag
gtgtactacccatacctgctgatcaacaagaagcgctacgctggcctctatttctccggc
agtgcagacacacatgaaaagatggactgtaaaggcattgagactgtccgcagagacaac
tgccctctggtggctaacctcatcaacacctgtctgcagagaattctcatagacagggat
ccccagggtgctgtggctcatgctaaagaggtgatctcagacctactgtgcaaccgtatc
gacatcagccagcttgtcatcaccaaggagctaacacgcaccgcccaggagtatgctggc
aaacaggcacacgtggagctggctgagaggatgaagaaaagagatgctggcagcgccccg
aacttgggagaccgagttccatacgtcattattaaggctgcaaagggagtagcagcatac
atgaagtcagaggacccgatctttgtgctggagaacaacattcctatagacacacaatac
tacctggagcagcagctgtccaagcccctgctgagaatatttgagccaatcctgggagag
agcaaggcagagaacatcctgctcaagggagaccacacgcgctgcaagactgtgttgacc
tcgaagatcgggggcctcatggcatttgctcagaagagaagcacctgcatcggctgcaaa
gctgtgctcaagacggacgcggctgtgtgcgatttctgtaagaagaaggagtctgaactg
taccaaaaagagatctttcacctcagcacactggaggagcgtttctctcgcctgtggact
cagtgtcagcgttgtcagggctccctccatgaggatgtgctctgtaccagtcgggattgt
cccatcttttacatgagaaagaaggttcagaaagatttggatgaccagagtaagctggtg
gatcgttttggatggtga
DBGET
integrated database retrieval system
