Sander lucioperca (pikeperch): 116065239
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Entry
116065239 CDS
T07345
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03440
Homologous recombination
sluc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116065239 (top3a)
03460 Fanconi anemia pathway
116065239 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sluc03032
]
116065239 (top3a)
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116065239 (top3a)
Enzymes [BR:
sluc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
116065239 (top3a)
DNA replication proteins [BR:
sluc03032
]
Eukaryotic type
DNA Topoisomerases
116065239 (top3a)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
116065239 (top3a)
FA (Fanconi anemia) pathway
116065239 (top3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
DUF7340
DUF2256
Motif
Other DBs
NCBI-GeneID:
116065239
NCBI-ProteinID:
XP_031176514
Ensembl:
ENSSLUG00000002501
LinkDB
All DBs
Position
21:16654654..16674512
Genome browser
AA seq
1044 aa
AA seq
DB search
MLVHLLGGRSLLRSGLTLQRLGVPRRCFCAAQSDRCPDTPQQQADMIRGRAQIKRVLCVA
EKNDAAKGIAEIMSNGRSRRREGMSKFNKIYEYEYHLFGQDVTVTMTSVSGHLLGLEFKA
QYRKWHSCNPVLLFDAEVQKCCPENMKQIKRTLEKEVRQCQVLVIWTDCDREGENIGFEV
IDVCKAVKHNLQVFRAKFSEITPNSIRRACETLMEPDANISDAVDVRQELDLRIGASFTR
FQTLRLQKIFPESLANQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVLHEVEEDN
VEFSWKRNRLFNHTACLVLYQICMENPIATVTSVTSKPKSKWRPLPLDTVELEKLASRKL
RINAKETMKIAEKLYTQGYISYPRTETNIFPENLPLGPLVEQQTQSPIWGTFAQRVMEQP
GGPNPRQGKKSDQAHPPIHPTKYSNTLQGNEGRVYEFIVRHFLACVSQDALGQETVVDID
IAQENFSSSGLMIIARNYLDVYPYDRWSAKVIPVYEQGSQFQPSAIEMVDGQTSPPQLLT
EADLISLMEKHGIGTDATHADHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEM
SKPNLRAELEADLKLVSEGRKDKQTVLQHHIQKYKTVFIESVRKAKKLDEALSPYLGAAQ
EVAEAEQQDMEFPLPVRKCPHCGQDMVLRKKREGNTKFLSCTGFPACKSAVWFPDTVLEV
SRDDSICLTCLPHPVHMLKFKFRRGSLPHMMPLEFVGCIGGCDETLREVLNLKYLRAGGE
GGGGGGGGGGGGGGGGGGPRGGRGGDPRPPAPRPPRPEPPRALSSNSRTSLPPAPSWTPQ
PQPPAGASALNVDNDVIVCNCGQDALLLTVRKDGPNQGRQFYKCNAGDCNFFLWADQPSQ
QGEPQGRGPPLQAPPRPPLGFRTTPGAGRGQEGGAGGHMGLTMCNCNETAVTRTVQKDGP
NKGRMFHTCGKPREQQCGFFQWADENEPPPVGSGGGFNGGGDRGRKGRKITGGATANKPA
AAKKPRTCGICHNPGHTRVTCPQR
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgctagttcacctcctcggcggcaggtctttgcttcggtcgggtctgacgttacagcgg
ctgggggtcccacggaggtgtttctgtgcggcgcagagtgaccggtgtccggacacaccg
cagcagcaggcagacatgatccggggccgggctcagatcaagcgggtcctctgcgtagcc
gagaagaacgatgcagccaaaggcatcgcagagataatgtccaacggcaggtccaggagg
agggaagggatgtcaaagtttaataaaatctatgagtatgaatatcatctctttggtcag
gatgtgacagtaacaatgacgtccgtatcaggccatttactgggtttggagtttaaagca
cagtaccggaaatggcacagttgcaatccagtgctgttatttgatgccgaggtacagaag
tgctgtccggaaaacatgaaacaaatcaagcgaacactagagaaagaggtgagacagtgc
caggtcttagtcatctggactgattgtgaccgagagggagaaaacattggctttgaagtc
atagatgtctgcaaagcagtgaagcataatttacaagtctttcgggcaaagttttctgag
atcacccccaactccattcggagagcttgtgagactctaatggagccagatgccaacatc
agcgatgctgtcgatgtccgtcaggagctggacctgcgaataggtgcgtccttcactcga
ttccaaacgcttcgcctgcagaagatctttccagagtctttggccaatcagctgatctca
tacggcagttgtcagtttcccactctgggctttgttgtggagcgcttcaaagccatccag
gctttcatacccgagactttctacaagatcaaagtgctgcacgaggtggaggaggacaat
gtagagttcagttggaaaagaaaccgtctcttcaaccacacagcatgcctggtgctctac
cagatctgtatggagaatcccatagcaacagtcacctcagtaaccagcaaacccaagagc
aagtggaggccgctgcctttggacactgtggaactggagaaacttgcatctcggaagcta
agaataaatgccaaagagaccatgaaaattgcagaaaaactgtatacccaagggtatatc
agctacccccgtacagagacaaacatttttcctgaaaacctgcctctcggccccctggtg
gagcagcagacacaaagcccgatctgggggacgtttgcccagagagtgatggaacagccg
gggggtcccaacccacgacagggcaagaaatctgaccaagcccatcccccgatacacccc
accaagtactccaatacactgcagggcaatgagggacgtgtgtatgagttcattgtccgg
cacttcctggcttgtgtatcccaggatgctttggggcaggagactgtggtggacatagac
atcgcccaggagaacttctcctcctcgggactcatgatcattgcaaggaactacttggac
gtttacccgtatgacaggtggagtgccaaggtgattccagtgtatgagcaaggctcccag
ttccagccctctgctatcgagatggtggatggacagacgagtcctccgcagctgctcact
gaagccgacctcatatccctgatggagaagcacggcattggcacagatgcaacccatgca
gaccacatcgagaccataaagagtcgcatgtatgtgggcttaacagctgaccagaggttt
ctgcctggagagctcggcatgggactggtggagggttacaactccatgggctatgagatg
tccaaaccaaatctgcgtgctgaattggaggcggacctcaagctggtatcagagggcagg
aaggacaaacagacggtgctgcagcaccacatccagaaatacaagaccgtcttcattgag
tctgtcaggaaggcgaagaagttggatgaagccctgtcgccatatctgggtgcagctcag
gaagtggctgaagcagagcagcaggacatggagttcccactgccggtcaggaagtgccct
cactgcggacaggacatggtgctgaggaagaagagggagggaaacactaagttcctgtcc
tgcacaggcttcccagcctgtaagtcagcagtgtggttccccgacacggtgctggaggtg
agcagagatgacagcatctgtctcacctgtctgccgcaccctgttcacatgttgaagttc
aagttccgcaggggcagcctccctcacatgatgcctttagaatttgttggctgcattggt
ggatgtgacgagacgctcagagaagtgctgaacctgaagtacctccgagcgggtggagaa
ggtggaggtggagggggagggggaggaggaggaggagggggtggaggaggtggaccacgg
ggaggaagaggaggggatcctcgtccaccagctccaaggcccccgagaccagagccaccc
agagccctgagttcaaattctcgaacttcccttcctcctgccccctcctggaccccgcag
ccacaacctccggcgggcgccagcgctctcaacgtagacaatgatgtcattgtgtgtaac
tgtggtcaggatgcactcctcctgaccgtgcgcaaagacggccccaaccaaggccgtcag
ttctacaagtgcaacgcgggggactgcaacttcttcctgtgggcggatcagccaagtcag
cagggggagccacagggtcgagggcctccgctgcaagcgccgccgaggccccctctgggg
ttcaggactacccctggagcaggcagagggcaggaagggggtgcaggaggacacatggga
ctgacaatgtgtaactgtaatgagacagcggtgacgcgaacggtgcagaaggacggtcca
aacaagggccggatgttccacacctgcgggaaaccaagagagcagcagtgtggcttcttc
caatgggctgatgagaacgaaccaccaccagttgggtccggtggtggatttaatggcggt
ggagacagagggaggaaggggaggaagatcacgggaggtgccaccgctaacaaacctgca
gctgctaagaaacctcgtacctgtggcatctgccacaatccgggacacacccgagtcacc
tgtccccagcggtga
DBGET
integrated database retrieval system
