Sander lucioperca (pikeperch): 116065242
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Entry
116065242 CDS
T07345
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04120
Ubiquitin mediated proteolysis
sluc04137
Mitophagy - animal
sluc04144
Endocytosis
sluc04340
Hedgehog signaling pathway
sluc04350
TGF-beta signaling pathway
sluc04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116065242 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116065242 (smurf1)
04350 TGF-beta signaling pathway
116065242 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116065242 (smurf1)
04137 Mitophagy - animal
116065242 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
116065242 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116065242 (smurf1)
04121 Ubiquitin system [BR:
sluc04121
]
116065242 (smurf1)
03029 Mitochondrial biogenesis [BR:
sluc03029
]
116065242 (smurf1)
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116065242 (smurf1)
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
116065242 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
116065242 (smurf1)
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
HECT type E3
116065242 (smurf1)
Mitochondrial biogenesis [BR:
sluc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
116065242 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
116065242
NCBI-ProteinID:
XP_031176521
Ensembl:
ENSSLUG00000004895
LinkDB
All DBs
Position
21:16392835..16410849
Genome browser
AA seq
729 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENDGPVFEGCFSEEPLPYSDPTGA
AGGGNCRLDSPSQEGRLQTQRIRGQDSRGHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLASVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHTIISQQSQAKESSQAPPMDVGGEEGGGGGVGGGGDGDVAARYERDLVHKLKLLRHE
LSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWL
YLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHGHYING
SFTLPFYKQLLGKPIQLNDLETTDPELHKSLVWILENDITSVLDHTFCVEHNAFGKFLQH
ELKPNGRNMPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLKPFDHKEL
ELIIGGLGKIDLADWKTNTRLKHCTSESNVVRWFWQAVEAFSEERRGRLLQFVTGSTRVP
LQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAV
EETCGFAVE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcggaggaacgggtccagcatcaaaatccgactgacagtatta
tgtgccaagaacctcgcaaagaaagacttctttcgcctgccagatccatttgccaaggtt
gtggtggacggatcaggtcagtgccactccacagacacagtcaagagcacactggacccc
aaatggaatcagcactacgacctctacattggaaagacagactccatcaccatcagtata
tggaaccacaagaagatccataaaagacagggggcgggcttcctgggctgcatacgactg
ctgtccaacgccatcagcaggctaaaagacacaggataccagcgtctagatctatgtaag
ctgaacccctcggacagtgacgcagtgcgggggcagatagtagtgagcttacagacgcga
gaccgtatcggcagcggaggccctgtggtggactgcagaggcctgttggaaaatgatggg
cctgtgttcgagggatgtttcagtgaagagccgctaccctactctgaccccactggtgcg
gcggggggcgggaactgtcggcttgactcacccagtcaggagggccgtcttcagacgcag
agaatcagagggcaggactccagaggccatggccacacccctcagaacagaccgcatggg
caccaaccgcctgatctgccagagggatacgagcaacgaacaacagtgcagggccaggtg
tacttccttcacacacagacgggcgtcagcacctggcacgaccctcggataccgcgggac
ctggccagtgtgagctgtgaggagcttgggccgctgccagtgggctgggaggtccgaagc
accgtgtcaggccggatctactttgtggaccacaacaaccgaacaacacagttcacagac
ccacgcctacacaccattatcagccagcaatcccaagcgaaggaatcctcacaagccccc
ccgatggatgtggggggtgaggaagggggaggtggaggagtgggcggcggaggagatggc
gatgtggccgcgcgctacgagagagacttggtccataaattgaagctgctccgccacgag
ctgtccttgcagcagcctcaagcaggacactgtcgcatagaggtgtcccgagaggagatc
tttgaggagtcatatcggcagataatgaagatgaggcccaaggacctgaagaagcgtctg
atggtgaagtttaggggagaggagggcctggactatggcggggtggccagggagtggctg
tacctgctgtgtcatgaaatgttgaacccctattacggcctgttccagtactccacagac
aatatctacacactacagatcaaccccgactcctccatcaaccctgaccacctgtcatat
ttccactttgtgggccgtgtgatgggcttggcagtttttcacggtcactacatcaacggg
agcttcacgctgcccttctacaaacagctgctaggcaaacccatccagctcaacgacctg
gagacgaccgacccagagttgcacaagagcctcgtctggatattagagaatgacatcact
tcagtcctcgaccacactttctgcgtggagcacaatgcctttgggaagttcttgcaacat
gaactcaaacccaatggccgcaatatgcctgtcactgaggagaacaaaaaagaatacgtc
agactttatgtaaactggaggtttatgcgtggaattgaagcccagtttctggctctacag
aagggattcagtgagctcatcccccagcacctcctcaaacctttcgaccataaagaactc
gagttgatcatcggtggactggggaaaatagatcttgcagactggaagactaacacccgc
ctgaagcactgcacgagtgaaagcaacgtggtgcggtggttctggcaggcagtggaggcc
ttcagtgaggagaggcgagggcgcctcctgcagtttgtcacaggctccaccagggtcccc
ttacaaggattcaaagcgctgcagggttctacaggttctgcaggaccaaggctcttcacc
atccatttgatagatgccaacacagacaacctgcccaaggctcacacgtgttttaaccgg
atagacatccctccctacgagtcttacgagaaactctatgagaaactgctgacggctgtg
gaggagacctgcggcttcgccgtggagtga
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