Sander lucioperca (pikeperch): 116065269
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Entry
116065269 CDS
T07345
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic isoform X3
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc00260
Glycine, serine and threonine metabolism
sluc00630
Glyoxylate and dicarboxylate metabolism
sluc00670
One carbon pool by folate
sluc01100
Metabolic pathways
sluc01200
Carbon metabolism
sluc01230
Biosynthesis of amino acids
sluc01240
Biosynthesis of cofactors
sluc04981
Folate transport and metabolism
Module
sluc_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
116065269 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
116065269 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
116065269 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
116065269 (shmt1)
Enzymes [BR:
sluc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
116065269 (shmt1)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
116065269
NCBI-ProteinID:
XP_031176567
Ensembl:
ENSSLUG00000004456
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All DBs
Position
21:complement(16623326..16634059)
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AA seq
482 aa
AA seq
DB search
MSLTNGHAVSKETWVSHNKMMLEPLSVNDSEVFSIIKKEKHRQTYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALEAYGLDSEKWGVNAQPYSGS
PANFAVYTAVVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGYV
DYDRLQENARLFHPRLIIAGTSCYSRNLDYGRLKQIANENGAYLMGDMAHISGLVAAGVV
PSPFEHCDIVSTTTHKTLRGCRAGLIFYRKGVRSVDAKGKETLYNLESLINQAVFPGLQG
GPHNHAIAGVAVALKQAMTPEFKAYQVQVLANCKALSSGLIDRGYKIVTGGSDNHLILLD
LRSKGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGLVEDDFKKVA
EFIHRGIELTLEVQGSLDPKANLKEFIQALTQGEKFQQRVAEIRAEVEGFAGQFPMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaacaaatggccacgctgtgagcaaagaaacatgggtttcacacaacaagatg
atgctggagcctctgtccgtcaatgactctgaggtgttctccatcataaaaaaagagaag
cacaggcagacgtacggtctggagctgatagcgtccgagaactttgccagcagagccgtt
cttgaggctctgggttcctgcatgaacaacaaatactctgagggatatcccggccagagg
tactacggtggtacggagcatgttgatgagctggagagactctgccagaagagggcgctg
gaggcctatggtctggactcagagaaatggggtgtcaacgcgcagccatactcgggttca
cccgccaactttgccgtctacacggccgtcgtggagccccatggcaggatcatggggctg
gaccttcctgatggaggtcacctgacacacggcttcatgaccgagaagaagaaaatctca
gcaacgtccatcttctttgagtccatgccgtataaggtgaatccagagactggctacgtt
gactatgacagactgcaagaaaacgcccggctgttccacccaagactcatcattgcagga
acaagctgctattcccgcaaccttgactacggccgcctgaagcagatcgctaatgagaat
ggtgcgtatctgatgggagacatggctcacatcagtggattggtggctgctggagtggtg
ccctcaccctttgagcactgtgacattgtttccacgacaacgcacaagacgctgcgtggc
tgccgcgctggactcatcttctacaggaaaggcgtgcggagtgtggatgccaaagggaag
gagactctgtacaacttggagtctttgatcaatcaggctgtgtttcctgggctgcaggga
ggaccacacaaccacgctattgcaggtgttgctgtagctctcaaacaagccatgacgccg
gagttcaaggcctaccaggtgcaggttcttgctaactgcaaagctctatccagtggcctt
attgaccgcggctacaagattgtcactggcggctctgacaaccatctgatcctgctggac
ctgcgcagcaaagggactgatggaggacgagctgagaaggttttggaagcctgtgccatt
gcttgtaataagaacacctgtccaggagataagagtgctctgcgccctagtggtctgagg
tttggctctccagctctgacctccagaggcttggtggaggatgacttcaagaaggtggca
gagttcattcacagaggtattgagctgaccttggaggtgcagggaagcctggatcccaag
gccaatctaaaggagttcattcaggcactgacccagggagagaagttccagcagcgggta
gcagaaatcagggcagaggtggagggtttcgctggccagttccccatgcctggcctacct
gagctgtag
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