Sander lucioperca (pikeperch): 116065340
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Entry
116065340 CDS
T07345
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116065340
Enzymes [BR:
sluc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116065340
Spliceosome [BR:
sluc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
116065340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116065340
NCBI-ProteinID:
XP_031176670
Ensembl:
ENSSLUG00000022263
UniProt:
A0A8D0AF77
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Position
21:complement(29180319..29191871)
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AA seq
654 aa
AA seq
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MRGSYGDKDRDRGRDRGSPRFGSSRGGPPPGRKFGNPGDRLRKKRWDLDELPKFEKNFYT
EHPEIQRMSQYDVEEYCRKKEITVRGSGCPKPVTSFSQAQFPQYVLDVLMQQNFKEPTAI
QAQGFPLALSGRDMVGIAQTGSGKTLSYLLPAIVHINHQPYLERGDGPICLVLAPTRELA
QQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLR
RCTYLVLDEADRMLDMGFEPQIRKILDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYVQI
NIGALELSANHNILQIVDVCMDSEKDHKLLQLMEEIMAEKENKTIIFVETKKRCDDLTRR
MRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTNKGTAYTFFTPGNLRQARDLIRVLEEARQAINPKLLQLVDTGRG
GGGGGGRLRFRGSSNSNNPNLMYQDTCDRRMRSVGGGGSSAKDSRGSSSSYGRDSRDSRG
GSSRDRERSSSSSSSHRDRSSRDGGRSYGSSSSSSSSSYDQYQNNSSSSSSQYSSSRGSS
GSGGGGVGQVPPSSAGPQPLMAKQFNPPQPMMGLMGHSPFQFAPPQPPPPSGRK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgagaggttcttacggagacaaagatcgagaccgtggccgtgacagagggagccctcgt
ttcgggtccagcagaggcggcccaccaccgggtagaaagttcgggaaccccggggaccgt
ttacgaaagaagagatgggacctggatgagcttccgaaatttgaaaagaacttttatact
gaacatccggaaatccagcgaatgagccagtatgatgtcgaggagtattgcaggaagaaa
gaaatcactgttcgaggttcaggctgcccaaagcctgtcacttccttcagtcaggcccag
tttccccaatatgtattggatgtactgatgcagcagaatttcaaggagcccacagccatt
caggcacaaggtttccctctggccctcagcgggagagacatggtgggcattgctcagacc
ggctctgggaagaccttatcgtacctcctgcctgccattgtgcacatcaatcatcagccc
tacttggagcgtggagatggacccatttgcttggttctggcccccacaagagaactggcg
cagcaggtccagcaggtggcatacgactacggaaagtcatcccgcatcaaaagcacttgt
gtgtatgggggtgctcccaagggacctcaaatcagagacctggagagaggtgttgagatc
tgcattgccactccaggtcgtctgattgacttccttgaggctggaaagaccaacctgcga
cgctgcacatacttggttctggatgaagccgaccgcatgctggatatgggttttgaaccc
cagattcgcaagattctggaccagatcaggcccgacagacagaccctgatgtggagcgct
acctggcctaaagaggttcgccagctggcagaggactttctgaaagactatgtccaaatc
aatattggagcgctggaactcagtgccaaccacaacatccttcagatagttgacgtctgt
atggatagtgagaaagaccacaagttgctccagctgatggaggagatcatggctgagaaa
gagaacaagaccatcatctttgtggagaccaagaaacgatgtgacgatctcacacgcagg
atgagacgtgatggatggccagcgatgtgtattcatggtgacaagagccagccagagaga
gactgggtgttaacagagttccgtagcggcaaagctcccatcctcatcgctactgacgtg
gcctcacgtggtttggatgtggaggatgtcaagtttgtcatcaattatgactatcccaac
tcatcggaggactacatccatcgcatcggtcgtacggcccgcagcaccaacaaaggcacc
gcctacaccttcttcactccggggaacctccgccaggcccgcgacctgatccgggtgctg
gaggaggcccgccaggccatcaatcccaaactgctgcagctggttgatactggacgggga
ggaggcggagggggtggccgtcttcgttttcgtggcagctccaattctaacaatcccaac
ctgatgtaccaggacacgtgtgaccggcgaatgcgttctgtgggtggaggtggcagcagc
gccaaggacagccgcggcagcagcagcagctatggccgcgacagccgagatagccgcgga
ggaagcagccgggaccgggaacgctcctcctcatcttcctcgtctcacagggatcgcagc
agcagggacggaggacgcagctacggctccagctccagctccagctccagctcatacgac
cagtatcagaataacagcagcagcagcagcagtcagtacagcagctctaggggcagctct
gggtcagggggcggtggagtagggcaggtcccaccttcttcagccggcccccagcctcta
atggccaagcagttcaaccctccccagcccatgatgggcctgatggggcactcgccgttc
cagttcgctcctccacagccaccccctccatcaggcagaaagtaa
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