Sander lucioperca (pikeperch): 116065685
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Entry
116065685 CDS
T07345
Symbol
rin3
Name
(RefSeq) ras and Rab interactor 3 isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116065685 (rin3)
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
116065685 (rin3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
GPW_gp25
EcsC
Motif
Other DBs
NCBI-GeneID:
116065685
NCBI-ProteinID:
XP_031177111
Ensembl:
ENSSLUG00000019039
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All DBs
Position
18:complement(30549619..30573416)
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AA seq
1121 aa
AA seq
DB search
MMEASVVSQDTGHTSPLTGSLDTPSASSPASIPPSFPLSPPSLPSSNPPVRPCRPKPPPP
AVKSPPLPSCPPLPESTPSPLPVALPPVSKPPHPLPPIAKPPPPLSSNPPPPSVPPPLSF
NPPPPSLPPPLSPTPVSPSPLLSLQPTVSSDPSPSFTPPPPLPPPPLSSSSSSPPPPPPV
IPPSSPTPPLLSLIDRLVESVSVWQPKGVSQDQSTSVMEKETAGAFLLNSTEDKDMTLSV
RLPDEQGAPLVHNLAVKQHKTFLHLDGSCLVFDDIFKLISFYCASRDILAIPLRLPRAIT
TATKREELEVISALGADFWTSDLNQQAQNQDLVLDHNHSKLYVYVNPVTVEESPNKDLNH
PTISKLDIIANQNITPSLQNGEAAQKISTAKVKGQTKTTPSHEIKYKRPPPRPPSLGSGS
GMGLLFSSPPSLHTSSSVTPAVERKKEGKGGAGEREERKSTSTSLTPSRPPVPLQSRAAP
PLPPAPLRRTSSRKSTDREEGEGTEREKGEKPAKKTEREGGGERGEEKTGSKSGQLDEGV
EQENSSQHQEEEVKKDGEKREKEDEKEERDVKLEEEEDKQKSSSPCSPSVKKPSRPVPPP
RRKPCPPKAPVCPNQAGGGSANQTAGMRGPPPSPARRPDVSLYSPQGGAVLVTDPDSCSA
SSTEEEGELKQEQEQNHNRPAESANPVKRASTTVMLDRARYRLSNVITGLISHDRRLTQR
IVELARDPLSYFGNLVKEHRAFTLETMSNHSSSTELLQEIRQMMTQLKSYLLQSTELQAI
LEPQHQYAQDKLESMVEAALCKSVLKPLREPIYQSLEKLHTDDGSLKQLAQNQSVVLGST
TTALGVTTAIPEASTMEKISIKLNSLHLEYSPQKKIEFMLKACKMIYDSMSASSPGRAHG
ADDFLPVMMYVLARCNLSTLKLDVEYMMELMDPSLALGEGSYYLTTTYGALEHIKTFDQQ
RTATRQLSREVQDSIHRWERRRTLNQERMAQGSIRDFLTVCCPEIGTNPKTLGVLPTTTM
EQLAEQCAARFEQDGYVLGVYMDGVHQPVAPTELALSVKNSSQPGAYCFVYHPIDQPVSQ
PGRSCPTDPPPGPPAESFPPSDFAAVDTVEPEAEEESLISL
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagccagcgttgtttcccaggacacaggccacacaagccctctgacaggatca
cttgacacgccgtctgcctcttctcctgcctccatccctccatcttttccgctttctcca
ccctccctgccatcctccaaccctccggtccggccatgtcgacccaaaccgccccctccc
gcggtgaagtcccccccgctcccctcttgtcctcctctacctgagtccactccttcaccc
cttcctgtcgctctccctcctgtctccaaacctcctcatcctctccctcctatcgccaaa
cctcctccccccctctcctccaatcctcctcctccctccgttcctccgcctctctccttc
aaccctcctcccccatctctcccccctcctctctcccctactccggtctctccttctccc
ctgctttctctccagccaactgtctcctctgatccctctccctctttcactcctcctcct
cctcttcctcctcctccgttatcatcctcctcctcatcgcctcctccacctccacctgtt
atcccaccatcctctccaactcctccgttgctgagtctcatagatcggctggttgagagc
gtctcggtatggcagcccaaaggagtcagccaagaccaaagcactagtgtcatggagaag
gagacagccggggccttcctgctgaacagcacagaggacaaggacatgacactgtcggtg
cggctgcctgatgaacagggggcgccgctcgtacacaacttggcggtcaaacaacacaag
acatttctccacttagatggttcctgtctggtttttgatgacatcttcaaattgatctcc
ttctactgtgccagcagggacattctggccattccactgagattaccccgagctattacc
acagcaacgaagagagaggagctggaggtcatctccgcattgggtgcagatttctggacg
tctgatctgaaccagcaggcacagaaccaggacttggttttggatcacaaccacagcaaa
ctgtatgtgtacgtcaacccagtcactgtagaggagagccccaacaaagacctgaaccac
cccactatctccaaacttgatatcatcgccaatcaaaacatcaccccctccctgcagaat
ggagaagccgcacagaagatcagcacagccaaggtcaaaggtcagactaagaccacgccc
agccacgagattaaatacaagcgccccccaccccgaccccctagcctgggctcagggtca
gggatgggcctcctcttctcctctcccccctcgcttcacacttcatcttctgtgacgcca
gcggttgagagaaaaaaggaaggaaagggaggagcaggagagagagaagagaggaagtca
acgtcgacatcacttactccatcgaggcctcctgtccccctgcagagccgagccgctccc
ccgctgcctcctgctcctctccgtcgcacctcgtccaggaaaagcactgaccgagaggaa
ggagaggggacggagagagagaagggagaaaaacctgcaaagaaaacggagagagagggg
ggaggagagagaggagaggagaaaacgggaagtaaatcaggtcagctggatgagggggtt
gagcaagagaacagtagccagcatcaagaggaggaggttaaaaaggatggggaaaagaga
gagaaagaggatgagaaggaggaaagagacgtgaaattggaggaagaggaggacaaacag
aaatccagctccccgtgttctccgtcagtgaaaaaaccgtcccgtccagtccctccgcca
aggaggaaaccgtgtcccccaaaagcacctgtgtgccccaaccaggcgggaggaggatca
gccaatcagactgctgggatgagagggccccctccctccccggcgcggcggccagatgtg
tcgctgtactcgccgcagggcggtgctgtgctagtaactgatcccgactcctgctctgcc
agcagcactgaggaagaaggagagctgaaacaggagcaggagcaaaaccacaatcgccct
gcagagagtgccaacccagtaaagagagcctccaccactgttatgttggaccgagcacgc
taccgcctgtccaacgtcatcacgggcctcatcagccacgaccgtcgcctcacacagcgc
atcgtagagctggccagggaccctctgagctactttgggaacctggtgaaagagcaccgt
gcattcaccctggagaccatgtcgaaccactcctcctccaccgagctgttgcaggagatc
agacagatgatgactcagctgaagagttacctactgcagagtaccgagctgcaagctatc
ctggagccgcaacatcagtatgcacaagacaaactggagagcatggtagaagctgctctg
tgtaagagtgtactgaagccactgagggagccaatttaccagagtctggagaaactgcac
accgacgacggcagcctgaaacaattggcacagaaccagtctgtcgtcctaggcagcacc
accacagcattaggagtaactactgccatccccgaggcctctactatggagaagatcagc
atcaaactgaacagcctccatctggagtattctccccagaaaaagattgagttcatgctg
aaggcctgcaagatgatctatgactccatgtctgccagcagcccagggcgggcccatggt
gctgatgacttcctgcctgtaatgatgtatgtcctggctagatgcaatctgtccaccctg
aagctggatgttgaatatatgatggagttgatggacccatcattagcactaggagaaggt
tcctattatctgaccaccacctacggggctctggagcacatcaagacttttgaccagcag
aggacagcaacacggcagctcagcagagaggttcaggactccatccaccgctgggagaga
cggcgcacgctcaaccaggaacgcatggctcaaggatctattcgggactttctgacagtg
tgttgtccagagattggaaccaacccaaaaactctgggtgtcctccccaccacgacaatg
gaacagctagctgagcagtgtgctgcacgctttgaacaagacggctacgtgctcggtgtg
tatatggatggtgttcaccagcccgtggctcctacagagctggccctcagtgttaagaac
agttcccaacctggagcctactgctttgtctatcaccctatcgaccaacccgtcagccag
cctggccgcagctgccctaccgacccgcctccgggtccacccgcagaaagctttccccca
tctgactttgcagctgtcgacactgtggagccagaggcggaagaggagagtctgattagc
ttgtaa
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