Sander lucioperca (pikeperch): 116066185
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Entry
116066185 CDS
T07345
Symbol
prdm1c
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116066185 (prdm1c)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116066185 (prdm1c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
zf-met
zf-C2HE
Zf-C2H2_ZNF451
zf-C2H2_15
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
116066185
NCBI-ProteinID:
XP_031177948
Ensembl:
ENSSLUG00000006356
LinkDB
All DBs
Position
19:12830483..12839360
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AA seq
779 aa
AA seq
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MCGSSQGFTASSSPCTTAMLTPESSPQSTGVIAAMPEPQDVDMTSLSEANFEEKCTYIVK
DQHLEEESENNSKTRAERSLPRNLTLKRCHISAEVLGVTSKELIPKGTRFGPLVGESYTN
ETLLKDADRKYFWRVFSEGRLHHILDGLIEERSNWMRYVNPACTVEEQNLVACQSGLDIY
FYTIKPLQPGQELLVWYCPEFAQRCNYPPLGQLATDSVDQSQAQKKTTEKRGHSVSEILR
DEPSKSLTTSPRRLDSPLSHVNLPAVFPLCPRVVYPIHPNSESIHGHRHATLPHLPSGSH
PAAKRPALSGPLPSSLHFTFQHSQGPVIAKPYQEPSVPDRVYPALRHSPYLLPHYSLGLN
SILPHSYPLYRDQLKPHLTLSSNLLPYAHFFQPLANGHKDLTLALSDTKQDLILSPSSEH
RDRTNYLRIPSHNLRDFTHSPPSNVQADLTIPTTSSASSMVTSLRRALPSLAPGGCSPPV
GMAAFSDCLPSKPTSATQSNTEDAMDLRKITQGGQVIGYKTLSYPLTRQNGKIRYECNVC
GKVFGQLSNLKVHLRVHSGERPFRCQTCNKNFTQLAHLQKHYLVHTGEKPHECKVCHKRF
SSTSNLKTHQRLHSGERPYQCKLCPARFTQFVHLKLHKRLHTGERPHRCPCCPCAYLHYC
SLQVHLQGFCPLSPAASHRHSPEELHRVNAEIERFDMSEAAEQLETMAAEAEMDKGNVID
LIKKMETHSSGPHDDEEVETELSIYTSAKECSAVQLHHASPLPLHSTSIKLESGCISEP
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctcctcccaaggcttcacagcctcctcctctccgtgcaccacagccatgtta
accccagaaagctcaccgcaaagcacaggggtcatcgcagcgatgccagagccacaggat
gtagacatgacatcattgagcgaggcaaactttgaggagaagtgcacttatatcgtcaag
gaccaacatctggaggaagagtccgaaaacaacagcaagacacgagctgagagatcctta
cccagaaacctgacgctgaaacgctgccacatctctgcagaggtgcttggggtgaccagt
aaggaactgattcctaagggaacacgttttggccctctggtgggggaaagctacaccaat
gaaacgctgttgaaagacgctgacaggaagtacttctggagggttttctctgaggggcgt
ttacaccacatcctggatggtttgatcgaggagcggagcaactggatgcgctatgtcaac
ccggcctgtactgtggaggagcagaatctggttgcctgccagagtggtttggacatctac
ttctacaccatcaaaccacttcaaccgggccaggagctcctggtgtggtactgccctgaa
ttcgcccagcgctgtaactaccctccactgggccaacttgctacggacagtgttgatcag
agtcaagctcagaaaaagacaacagaaaaacgaggacacagcgtctctgaaatcctcaga
gacgagccatccaaatccctgactacctcccccagacgtctggatagtcccttgtctcat
gtcaacctcccagcagtttttcccctgtgcccccgtgttgtctacccaatccatcccaac
tcagaatccatccatggccacagacatgcaactctaccacatctgccatccggtagccat
ccagctgccaaaagaccagctctaagtggtcctctcccttccagtttgcacttcaccttt
cagcacagtcaaggccctgttatagccaaaccttaccaagagccttctgtgcctgatcga
gtttatcctgcactgaggcattctccctatctactgcctcactactcgctcggccttaac
agcattctacctcattcttacccattgtacagagatcaactgaaacctcacttaacactc
tcatctaatttactgccttatgcacacttcttccaacctctggccaacggacacaaagac
ttgacacttgcactatccgacaccaaacaagacctcattctttcaccaagcagtgagcac
agagacaggacaaactacctcagaatcccctcacataacctcagagatttcacacactct
cctcccagcaatgtccaagcagacctcactatacccaccacgtccagtgcttcatccatg
gtcacctcactccgcagagcactgccctctcttgcgcctggaggatgctcaccaccagtg
ggcatggccgccttttcagattgcctcccttccaaacccacctctgccactcagagcaat
actgaggatgcaatggacctcaggaagatcacacaaggtgggcaggttattggctacaag
accctgtcttaccccctcaccaggcagaatggaaagattcggtatgagtgcaatgtctgt
ggaaaggtctttgggcagctgtccaacctcaaggtccatctgcgagtgcacagcggagag
cgtcccttcaggtgtcagacctgcaataagaacttcactcagctggcccatctgcagaaa
cactacctggttcacacaggagagaagcctcatgaatgcaaagtgtgccataagcgattc
agtagcactagtaacttgaagacccaccagcgtctacactcaggtgagaggccctaccag
tgcaagctctgcccagcccgctttactcaattcgtccatctcaagctccacaaacgcctc
cacactggagaacggcctcacaggtgtccttgctgcccctgtgcctatctccactactgc
agcctccaggtgcacctccaaggcttctgccctctctcccctgcggcatctcacagacac
tcaccggaggagctacaccgagtcaatgcggagattgagaggtttgatatgagcgaggcg
gcagagcagctagagaccatggctgcagaggccgagatggacaaggggaatgttattgac
ttaataaagaagatggagactcattcctctggcccccatgatgacgaagaagtggagact
gagctgagcatctacacatcagcaaaggagtgttctgccgttcagttgcatcatgccagc
cctctacctctgcattcaaccagcatcaagctggagtcaggctgcatatcagaaccctaa
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