Sander lucioperca (pikeperch): 116066213
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Entry
116066213 CDS
T07345
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116066213
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116066213
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
116066213
NCBI-ProteinID:
XP_031178014
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All DBs
Position
19:13683998..13692670
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AA seq
912 aa
AA seq
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MGVHDLWSIVEPVCESVPLYSLSGKTLAVDLSLWVCEAQHVQAMMGRVTKPHLRNLFFRV
SSLTLMGVKLVFVMEGEAPQLKAETMSKRTETRYGGFKKASVPKSTTNTSRGRFKAVLRE
CADMLDSLGVPWVTATGEAEAMCAYLDSQGLVDGCITNDGDAFLYGARTVYRNFNMNSKD
PQVDCYRTSRVQRELHLSRENLVGLAILLGCDYIPKGIPGVGKEQALRLIQMLKGQTLLQ
RFIQWKEENADVSKGVMKKVSHCNVCRHPGSAKAHERGGCVLCNSKHFCQPQDFDYQCPC
DWHRYEQTHQALSFEANIRKKTLASQQFPFTEIIREFLISKDNPVSHFKRRQPNMLLMQK
FAYDKMEWPKHYTSEKVLVLMTYAELMNRKYGREMSSQIKPLRILKPRVRNAVACFEIIW
RTPEHYVFPEDRPAEDQHEVRTVEEESLFRVAYPEVVESYLRDKALAEEKKTKKKKPKSK
KDKPSDGSDGISDLLAQMTLQSASNTRPQTLLATISNSDEPEVVVLDTPVNHKQHRKSKK
DHSSLGDCPNTPLSHAESETAASPSVSAVIDALHLSDIDWDALSFTSSPTPQSATNHTTE
PPEQSKTTDTDVREREGENTKQKTSGDVKEADSIPTPQLCYTECPLRDRLLMRNTAKAIN
QKEINNDMVSKQLNYELTSFKHISSHNSKPSGHVPSKGNSGSKWSGMESAVNKKEPLTEK
RLCATNKAETAAQSKTKDKCNVKPPQKYKFVRKAISSSAVPPQRCHSDPGQSDKDRNGPP
ITKKSVCMSMCSSSEESDAENQQSGPQRRAKIKPVNNIQASFLSDFPLKPKTSKPTAKTA
PTVHLLRPISQSYSADIEINGMHVLTKSKCQDVSPAHVETPASPVVLDSDDSVICSESPL
PLAERLRLKFLK
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttcacgatttgtggtccatcgtcgagccggtttgtgagtcggtgccgctgtac
agtttgagcggaaagacgctggcagtggacctgagtttatgggtgtgcgaggcccagcat
gtccaagcaatgatggggagagttaccaagccccacctgaggaatttattttttagggtg
tcatccctcacgcttatgggggtaaagcttgtctttgtaatggaaggagaagcccctcaa
cttaaagcagaaaccatgagcaagaggacagaaacgagatatggaggattcaaaaaggct
tctgtcccgaagtctacaacaaacaccagcagagggcgctttaaagctgtgcttagagag
tgtgcagacatgttggactctctgggtgtgccctgggtgacagctaccggggaggctgag
gccatgtgtgcctacctggactcacagggcctggtagatggctgcatcactaatgatgga
gacgccttcttgtatggtgcccggactgtctacaggaacttcaatatgaacagtaaagac
cctcaggtggactgttacaggacctccagggtacaaagagagttacatctctccagagag
aatctagttggtctggccatcctccttggctgtgattatattcctaagggcataccaggt
gttggtaaagagcaagcactaaggcttatccagatgctgaagggacaaacacttttgcag
aggttcatccagtggaaggaggagaatgcagatgtgtctaagggagttatgaagaaagtt
tctcactgcaacgtatgtcgacatcctggctcagcaaaggcacatgaacgtggcggctgt
gtgctttgcaacagtaaacatttctgtcaaccccaggactttgactaccagtgtccctgt
gactggcaccgctatgaacagacccaccaggccttgtcttttgaggcaaatatcagaaag
aaaacactggcaagtcaacagttcccctttacagagatcattcgtgagttcctgatttcc
aaggataatccagtgtcccatttcaagaggagacagccaaatatgctgttgatgcagaaa
tttgcctatgacaagatggaatggccaaagcactacaccagtgaaaaggttttagtcttg
atgacctacgcagagttgatgaacagaaaatatggaagagaaatgtcctcccaaatcaag
ccccttagaatattgaaaccaagggtgaggaatgctgttgcttgctttgagatcatctgg
agaacaccagaacattacgtgtttcctgaggatcggcctgcagaggatcaacatgaggtg
aggacggtggaggaagagtctctcttccgtgtggcctacccagaggtggtggagagctac
ctgagagacaaagctctggctgaagagaaaaagactaagaagaaaaagccaaagagtaaa
aaggacaagccatctgatggctccgatggtatttcggacctcttggctcagatgaccctt
cagagtgcctctaacactcgaccacaaacgctgctcgctaccatttcaaactccgatgaa
ccagaagtggtggttttggacactccagtgaaccataaacagcatcgaaagtcaaagaaa
gaccacagcagtctgggcgattgccccaatactcctctgtctcatgcagaatcagagact
gctgcttcaccgtctgtctctgctgttatcgatgctctacacctgagtgatattgactgg
gatgctttgtccttcacatcctctccgactccacaatcggctacaaaccacaccactgag
ccacccgagcagagcaaaaccacagacactgatgtcagggaaagggagggcgaaaacacc
aagcagaaaacctcaggtgacgtcaaagaagctgactccatacctactccacagttatgc
tacacagagtgtcctctaagggacaggctgctcatgaggaacacagctaaagctataaac
cagaaagagataaacaacgacatggtctcaaaacaactaaactatgagttgacctctttc
aaacacatttcttctcataactcaaaaccaagtggacacgtccccagtaaaggtaacagt
ggcagtaaatggtcaggaatggaatctgctgttaacaaaaaagaaccactcactgagaaa
aggctgtgtgcaacaaataaggcagaaactgcagctcaaagtaagacaaaggacaaatgt
aatgtaaagcctcctcagaaatacaaatttgttcgaaaagccatttcgtcatcggctgtc
ccaccacagagatgccactctgacccaggtcaaagtgacaaggacaggaacgggccgccg
atcaccaagaagagcgtgtgtatgagcatgtgttcatccagcgaggaaagtgatgcagag
aaccagcagtctggacctcaaagacgagctaagatcaagcctgtgaacaatatccaggcc
agcttcctctcagacttccccctgaaaccaaaaacatccaaaccaacagcgaaaacagct
ccgactgttcatttattacgaccaatttctcagagctacagtgcagacatcgagataaac
ggcatgcatgtattaactaaaagcaaatgccaggacgtctcaccagctcatgtggagact
ccagcatcacctgtcgtgttagatagtgatgattcagttatttgtagtgagagtccattg
ccactggcagagagactgagactgaagttcctgaagtga
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